BAC Information

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BAC

Clone NameB6Ng01-162D01
Chromosome4 (Build37)
Map Location 32,318,995 - 32,416,990
singlet/doubletdoublet
Overlap geneBach2
Upstream geneMap3k7, LOC665218, LOC665228, LOC665232
Downstream geneGja10, Casp8ap2, Mdn1, Lyrm2, Ankrd6, LOC665298, Rragd, 4933421O10Rik, Ube2j1, LOC100039142, Gabrr2, Gabrr1, Acy1l2, Srrp, Pnrc1, Rngtt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162D01.bB6Ng01-162D01.g
ACCDH955089DH955090
length1,147416
definitionDH955089|Mus musculus domesticus DNA, BAC clone: B6Ng01-162D01, 5' end.DH955090|Mus musculus domesticus DNA, BAC clone: B6Ng01-162D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,415,834 - 32,416,990)(32,318,995 - 32,319,416)
sequence
gaattcatgacttgttgttgcaattgaaaagaaagacacaaagcaattac
ttagtcaaggataaaacccacagtccacttccgaaacaatgactaacctg
atgggagagaggagactctggtgattaaatactcaagtctagccattcaa
gataagcacagcacattacataatcttactctgtagtcacaatatccttc
tttccctcttggacatatatcagttttcagtaataactgaatgtgaaatt
aaaaagttactgggctataagaaatcagtttacaagctgaaatttaggaa
agaatagagcttccttaatttgaattttacaagtttcataaggagagaaa
atatccattagtagtgcggatgaaattcccttgagaacatgttagactct
aaaggagcaaaaccataaacaaatgtacatactcctatgcatactgatgc
ctggagtcatcactgggtctacacctaatggaattcccaagcttggagat
gttcatacccttacagcactgtaaactatgaggacctctctgagggcatg
ctcaggagcaaagaaagcacggacatattttcctagaaagatgggggcag
cttgattgcatgggtatgcaactgcagtcatctagtaaaaccgccactca
gccagggaatctactacatttcccaggctgccttgcgtttgggtagatct
gggtgatcagctctgaccaaggaatgagaagaaaagatttgctgtgcttt
gatctctcaggatcaagaatcaaaggttctctcttccggctcttttctgt
ccgtcatccagatgaagataattacagcgtcaactggtgatggtgtcatg
ggttaaatttattccccctttctcctccaaattcatatatcaaataggaa
ggcacagtgagacctctttgaaaatgggactgtcatcagataaattagtt
aagattaactcatactggaatagagagggctatatccagtacaccattat
tttcatagaagagacatttggggtctggtgtgtggtactctctgtaactc
cagcattcaggatcaagcaggagatctttgtgattcaaggctatacaata
acactatgattatacagtaggttcagcagctagaactacacaagtga
aactttccatatcctgtaagaagtcctatgtcaggtagagaaaattgttc
aatttcaaaattgtgtaattttattaaggactatccgtaaggctttcttc
tcacagacttgaaaattgccaggcatttctctctatggccaaaactttac
aagtttctttaaagcaatgatgtagtgaaccttaaaaaaaatcagccagt
tggtggaaaacagttttttaaggtggggtgggggcaagaagagatggaca
ggtgacttactaatgtgagaaacccaggtatcacaagtgggagaggaaaa
acattgtcactgctcttaagatggaacaaaagacaagtgacctgtggatg
ttgttattttgtttgcctttgaactcagcaccttctttcccatttttttg
aaggggggggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_32415834_32416990
seq2: B6Ng01-162D01.b_46_1192 (reverse)

seq1  TCAC-TGTGTAGTTCTAGCTGGCCTGGAACTTACTGTATAGATCATAGTG  49
      |||| ||||||||||||||||  || |||| ||||||||| |||||||||
seq2  TCACTTGTGTAGTTCTAGCTG--CT-GAACCTACTGTATA-ATCATAGTG  46

seq1  -TATTGTATAGGCCTTGAATTCACAAAGATCTCCCTGCCTTGATCCCCTG  98
       ||||||||| |||||||| |||||||||||| |||| ||||||  ||||
seq2  TTATTGTATA-GCCTTGAA-TCACAAAGATCT-CCTG-CTTGAT--CCTG  90

seq1  AATGCTGGAGTTACAGAGAGTACCAACACACCAGACCCCAAATGTCTCTT  148
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AATGCTGGAGTTACAGAGAGTACC-ACACACCAGACCCCAAATGTCTCTT  139

seq1  CTATGAAAATAATGGTTGTACTGGATATAGCCCTCTCTATTCCAGTATGA  198
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTATGAAAATAATGG-TGTACTGGATATAGCCCTCTCTATTCCAGTATGA  188

seq1  GTTAATCTTAACTAATTTATCTGATGACAGTCCCATTTTCAAAGAGGTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATCTTAACTAATTTATCTGATGACAGTCCCATTTTCAAAGAGGTCT  238

seq1  CACTGTGCCTTCCTATTTGATATATGAATTTGGAGGAGAAAGGGGGAATA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGCCTTCCTATTTGATATATGAATTTGGAGGAGAAAGGGGGAATA  288

seq1  AATTTAACCCATGACACCATCACCAGTTGACGCTGTAATTATCTTCATCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAACCCATGACACCATCACCAGTTGACGCTGTAATTATCTTCATCT  338

seq1  GGATGACGGACAGAAAAGAGCCGGAAGAGAGAACCTTTGATTCTTGATCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGACGGACAGAAAAGAGCCGGAAGAGAGAACCTTTGATTCTTGATCC  388

seq1  TGAGAGATCAAAGCACAGCAAATCTTTTCTTCTCATTCCTTGGTCAGAGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGATCAAAGCACAGCAAATCTTTTCTTCTCATTCCTTGGTCAGAGC  438

seq1  TGATCACCCAGATCTACCCAAACGCAAGGCAGCCTGGGAAATGTAGTAGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACCCAGATCTACCCAAACGCAAGGCAGCCTGGGAAATGTAGTAGA  488

seq1  TTCCCTGGCTGAGTGGCGGTTTTACTAGATGACTGCAGTTGCATACCCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGGCTGAGTGGCGGTTTTACTAGATGACTGCAGTTGCATACCCAT  538

seq1  GCAATCAAGCTGCCCCCATCTTTCTAGGAAAATATGTCCGTGCTTTCTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCAAGCTGCCCCCATCTTTCTAGGAAAATATGTCCGTGCTTTCTTT  588

seq1  GCTCCTGAGCATGCCCTCAGAGAGGTCCTCATAGTTTACAGTGCTGTAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGAGCATGCCCTCAGAGAGGTCCTCATAGTTTACAGTGCTGTAAG  638

seq1  GGTATGAACATCTCCAAGCTTGGGAATTCCATTAGGTGTAGACCCAGTGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGAACATCTCCAAGCTTGGGAATTCCATTAGGTGTAGACCCAGTGA  688

seq1  TGACTCCAGGCATCAGTATGCATAGGAGTATGTACATTTGTTTATGGTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCAGGCATCAGTATGCATAGGAGTATGTACATTTGTTTATGGTTT  738

seq1  TGCTCCTTTAGAGTCTAACATGTTCTCAAGGGAATTTCATCCGCACTACT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCTTTAGAGTCTAACATGTTCTCAAGGGAATTTCATCCGCACTACT  788

seq1  AATGGATATTTTCTCTCCTTATGAAACTTGTAAAATTCAAATTAAGGAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATATTTTCTCTCCTTATGAAACTTGTAAAATTCAAATTAAGGAAG  838

seq1  CTCTATTCTTTCCTAAATTTCAGCTTGTAAACTGATTTCTTATAGCCCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTCTTTCCTAAATTTCAGCTTGTAAACTGATTTCTTATAGCCCAG  888

seq1  TAACTTTTTAATTTCACATTCAGTTATTACTGAAAACTGATATATGTCCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTTAATTTCACATTCAGTTATTACTGAAAACTGATATATGTCCA  938

seq1  AGAGGGAAAGAAGGATATTGTGACTACAGAGTAAGATTATGTAATGTGCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAAAGAAGGATATTGTGACTACAGAGTAAGATTATGTAATGTGCT  988

seq1  GTGCTTATCTTGAATGGCTAGACTTGAGTATTTAATCACCAGAGTCTCCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTATCTTGAATGGCTAGACTTGAGTATTTAATCACCAGAGTCTCCT  1038

seq1  CTCTCCCATCAGGTTAGTCATTGTTTCGGAAGTGGACTGTGGGTTTTATC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCATCAGGTTAGTCATTGTTTCGGAAGTGGACTGTGGGTTTTATC  1088

seq1  CTTGACTAAGTAATTGCTTTGTGTCTTTCTTTTCAATTGCAACAACAAGT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACTAAGTAATTGCTTTGTGTCTTTCTTTTCAATTGCAACAACAAGT  1138

seq1  CATGAATTC  1157
      |||||||||
seq2  CATGAATTC  1147

seq1: chr4_32318995_32319416
seq2: B6Ng01-162D01.g_69_490

seq1  GAATTCAACTTTCCATATCCTGTAAGAAGTCCTATGTCAGGTAGAGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTTCCATATCCTGTAAGAAGTCCTATGTCAGGTAGAGAAAA  50

seq1  TTGTTCAATTTCAAAATTGTGTAATTTTATTAAGGACTATCCGTAAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAATTTCAAAATTGTGTAATTTTATTAAGGACTATCCGTAAGGCT  100

seq1  TTCTTCTCACAGACTTGAAAATTGCCAGGCATTTCTCTCTATGGCCAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCACAGACTTGAAAATTGCCAGGCATTTCTCTCTATGGCCAAAA  150

seq1  CTTTACAAGTTTCTTTAAAGCAATGATGTAGTGAACCTTAAAAAAAATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAAGTTTCTTTAAAGCAATGATGTAGTGAACCTTAAAAAAAATCA  200

seq1  GCCAGTTGGTGGAAAACAGTTTTTTAAGGTGGGGTGGGGGCAAGAAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTGGTGGAAAACAGTTTTTTAAGGTGGGGTGGGGGCAAGAAGAGA  250

seq1  TGGACAGGTGACTTACTAATGTGAGAAACCCAGGTATCACAAGTGGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGGTGACTTACTAATGTGAGAAACCCAGGTATCACAAGTGGGAGA  300

seq1  GGAAAAACATTGTCACTGCTCTTAAGATGGAACAAAAGACAAGTGACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAACATTGTCACTGCTCTTAAGATGGAACAAAAGACAAGTGACCTG  350

seq1  TGGATGTTGTTATTTTGTTTGCCTTTGAACTCAGCACCTTCTTTCCCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTTGTTATTTTGTTTGCCTTTGAACTCAGCACCTTCTTTCCCATT  400

seq1  TTTTTGAAGGGGGGGGGGGGGA  422
      ||||||||||||||||||||||
seq2  TTTTTGAAGGGGGGGGGGGGGA  422