BAC Information

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BAC

Clone NameB6Ng01-162M23
Chromosome4 (Build37)
Map Location 139,437,058 - 139,438,449
singlet/doubletsinglet
Overlap genenone
Upstream genePla2g2e, Otud3, Rnf186, Tmco4, Htr6, LOC665683, Nbl1, 2310028O11Rik, Hspe1-ps4, 9530077C14Rik, Capzb, Pqlc2, LOC100042808, Akr7a5, LOC625977, LOC626000, Mrto4, C230096C10Rik, Zubr1, C79267, Aldh4a1, Tas1r2, Pax7
Downstream geneGm1667, Klhdc7a, Igsf21, LOC100040728, Arhgef10l, Rcc2, Padi6, Padi4, Padi3, Padi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-162M23.bB6Ng01-162M23.g
ACCDH955553DH955554
length365951
definitionDH955553|Mus musculus domesticus DNA, BAC clone: B6Ng01-162M23, 5' end.DH955554|Mus musculus domesticus DNA, BAC clone: B6Ng01-162M23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacttgtagcacaggctaacctctaactcattttgtagctgagga
tgacctttgaactcctgttcttctgtgtctgtgcccccagcccctagttt
tgggattatagatgcatacctaccacgcccagtttaagctgagctggaaa
tcgaatccagaactaggcaaacactctaccaactgagccacatccctaac
cccaagatgtgctttgaaatgctttggcctgagtttggaccctattacat
ccacctgcattccaaatgcctgaatgaacaacatggcccctgactataaa
agcatttgggaaattcagtcatctatacatctggagaggagaggagagaa
ttaggggaggggagg
gaattctcagccttatgctgcttaatctcacatgtcccattggatgctca
ggaacaggtttgtccctgtgtccttaaaggaccacagcattcctgctccc
cagcttcctgaaacctccctactgtgtggagggcagtctctccaaagtga
aggccaggccaggccaggccaggacaagatctctcagtcactatcttcca
gctgtgcacaacggacaggtctcctcgttcgtctcagtctctacttttgc
ccagtggagataccaggcctgagtgtggtgtgagtgccaggattctagtg
cacatcacattcgtgactaaactcctcctgtggtcaatttcagcaataag
atcatcatctgcatgattatggacccagggtcaagtctgactgtgtcttt
aaggccagcattcaggaggtggaggcaggaggatcaggagttcaagggca
tccttagttacctcgtatgtacttgcacacacagttgggacatgccacct
ttgataagcagattgttggagactccaggtgctggatggatgtacccctt
cacgtgggtggaaggattatggagacagataataagtccatggaaacagt
cgcttaagtgtggcgactttttctaccccaattcaaatcacttgaaagga
tacaaccaagagaaagttccttcattggcctcacaggatgatttcttccc
tgccctggcccccctttcccagacacttggtcccaggccctcttcagccc
tgtactctggcttttctgcccctgagcactgcagacctccaggtggccct
atgtggacagcagagggagttcctggcattaggatggaacagagagtgcc
tggtcactgaatggggctggggatcagaaatgggagggatccaatgtgag
agacaccaattgggcaactgctctggtgtgtgtgtttgttgggggggaag
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_139437058_139438449
seq2: B6Ng01-162M23.g_69_1019

seq1  GAATTCTCAGCCTTATGCTGCTTAATCTCACATGTCCCATTGGATGCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCCTTATGCTGCTTAATCTCACATGTCCCATTGGATGCTCA  50

seq1  GGAACAGGTTTGTCCCTGTGTCCTTAAAGGACCACAGCATTCCTGCTCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGGTTTGTCCCTGTGTCCTTAAAGGACCACAGCATTCCTGCTCCC  100

seq1  CAGCTTCCTGAAACCTCCCTACTGTGTGGAGGGCAGTCTCTCCAAAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTCCTGAAACCTCCCTACTGTGTGGAGGGCAGTCTCTCCAAAGTGA  150

seq1  AGGCCAGGCCAGGCCAGGCCAGGACAAGATCTCTCAGTCACTATCTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCAGGCCAGGCCAGGCCAGGACAAGATCTCTCAGTCACTATCTTCCA  200

seq1  GCTGTGCACAACGGACAGGTCTCCTCGTTCGTCTCAGTCTCTACTTTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGCACAACGGACAGGTCTCCTCGTTCGTCTCAGTCTCTACTTTTGC  250

seq1  CCAGTGGAGATACCAGGCCTGAGTGTGGTGTGAGTGCCAGGATTCTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGAGATACCAGGCCTGAGTGTGGTGTGAGTGCCAGGATTCTAGTG  300

seq1  CACATCACATTCGTGACTAAACTCCTCCTGTGGTCAATTTCAGCAATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCACATTCGTGACTAAACTCCTCCTGTGGTCAATTTCAGCAATAAG  350

seq1  ATCATCATCTGCATGATTATGGACCCAGGGTCAAGTCTGACTGTGTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATCTGCATGATTATGGACCCAGGGTCAAGTCTGACTGTGTCTTT  400

seq1  AAGGCCAGCATTCAGGAGGTGGAGGCAGGAGGATCAGGAGTTCAAGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCAGCATTCAGGAGGTGGAGGCAGGAGGATCAGGAGTTCAAGGGCA  450

seq1  TCCTTAGTTACCTCGTATGTACTTGCACACACAGTTGGGACATGCCACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGTTACCTCGTATGTACTTGCACACACAGTTGGGACATGCCACCT  500

seq1  TTGATAAGCAGATTGTTGGAGACTCCAGGTGCTGGATGGATGTACCCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAGCAGATTGTTGGAGACTCCAGGTGCTGGATGGATGTACCCCTT  550

seq1  CACGTGGGTGGAAGGATTATGGAGACAGATAATAAGTCCATGGAAACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTGGGTGGAAGGATTATGGAGACAGATAATAAGTCCATGGAAACAGT  600

seq1  CGCTTAAGTGTGGCGACTTTTTCTACCCCAATTCAAATCACTTGAAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTAAGTGTGGCGACTTTTTCTACCCCAATTCAAATCACTTGAAAGGA  650

seq1  TACAACCAAGAGAAAGTTCCTTCATTGGCCTCACAGGATGATTTCTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACCAAGAGAAAGTTCCTTCATTGGCCTCACAGGATGATTTCTTCCC  700

seq1  TGCCCTGGCCCCCCTTTCCCAGACACTTGGTCCCAGGCCCTCTTCAGCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTGGCCCCCCTTTCCCAGACACTTGGTCCCAGGCCCTCTTCAGCCC  750

seq1  TGTACTCTGGCTTTTCTGCCCCTGAGCACTGCAGACCTCCAGGTGGCCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTGGCTTTTCTGCCCCTGAGCACTGCAGACCTCCAGGTGGCCCT  800

seq1  ATGTGGACAGCAGAGGGAGTTCCTGGCATTAGGATGGAACAGAGAGTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGACAGCAGAGGGAGTTCCTGGCATTAGGATGGAACAGAGAGTGCC  850

seq1  TGGTCACTGAATGGGGCTGGGGATCAGGAAATGGGAGGGATCCAATGTGA  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGTCACTGAATGGGGCTGGGGATCA-GAAATGGGAGGGATCCAATGTGA  899

seq1  GAGACACCAATT-GGCAACTGCTCTGGTGTGTGTGTTTGTT-GGGGGGAA  948
      |||||||||||| |||||||||||||||||||||||||||| ||||||||
seq2  GAGACACCAATTGGGCAACTGCTCTGGTGTGTGTGTTTGTTGGGGGGGAA  949

seq1  GGGCCAGGCCAACAAACATGTGGTCTTGCCTGTTACTGGTTTTTGTCTTT  998
      ||                                                
seq2  GG------------------------------------------------  951

seq1  AATGATTGACATCCTAGAGCCTCCCTCTTTGGCTAGATGGCTGGGACAGG  1048
                                                        
seq2  --------------------------------------------------  951

seq1  TCCCTGTGTCCTTCTGTAACACAGATGGTGAGTACTGGCCTCTCTACATG  1098
                                                        
seq2  --------------------------------------------------  951

seq1  GAGAGGGAACTCAAACATGGAGCCCTGCTCCCAGACACCTGACCTATGTC  1148
                                                        
seq2  --------------------------------------------------  951

seq1  ATATAGGTCACATATATTTCCAGAGTTGTCTGCAAGGCCCTGTATATCCT  1198
                                                        
seq2  --------------------------------------------------  951

seq1  GTCTCTGAGACACTAGCTAGCACGAATGCAGCCCTTGTCTCCTCTGGGCC  1248
                                                        
seq2  --------------------------------------------------  951

seq1  ACGTCCACTGTCCTGCCAGCTGCATCAGGACACCAAGTGGCAGGTGGATG  1298
                                                        
seq2  --------------------------------------------------  951

seq1  GCGTCATTCATCTGTGAGTCTAAAGGTTAATTTAAAAGTCAGTGGCAGGG  1348
                                                        
seq2  --------------------------------------------------  951

seq1  AGATGGCCTCCTCCACCTGACTCAGCTCACAGCCCATCAGAAGG  1392
                                                  
seq2  --------------------------------------------  951