BAC Information

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BAC

Clone NameB6Ng01-163B13
Chromosome4 (Build37)4 (Build37)
Map Location 146,551,003 - 146,552,166147,049,291 - 147,050,309
singlet/doubletsingletsinglet
Overlap geneOTTMUSG00000010657
Upstream geneLOC666386, LOC666390, LOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570
Downstream geneLOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163B13.bB6Ng01-163B13.g
ACCDH955769DH955770
length1,1591,020
definitionDH955769|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B13, 5' end.DH955770|Mus musculus domesticus DNA, BAC clone: B6Ng01-163B13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(146,551,003 - 146,552,166)(147,049,291 - 147,050,309)
sequence
gaattcctgtatctttctttaggttttcctactatgtgcttttgtaaatg
ctctgagatatgcagagactcctgaatgagagaaattctagttaaaaatc
ataactttttcattgtgtttccttcacatttctctgctttctttggaaaa
ataaccagtgctatattctctgagatcactccttatctcttatctagctt
cactcaagataaaaaagttcaagcaaaaatttaaatatccagaacaagaa
attatatttctatacatataatagtttcaattataaaaatcttactattg
ctttaaaatgttcccttatttatgaatctaaaaatatacaaggtttcaag
tggacatagagctgttgttttgcacaatttttttttatttaactttttga
catttgatctctgtgtttagatctgggacaccataatctttatcctagca
ttttggatattgaagcaaatctatttagtaatttccctgaggctatcagt
tatatcataaatttgtacctgaccaagtttatacctgattcagtgttact
ctgaataaaattataaccataaaattagagatattttgtttagaattcta
ctttctgaaaattcactagagaaggatcatttatttgtcccagcttatgc
aaagtacaattttcttttttattggtcattttatttatttacatgtcgat
tgttatgccccttcttcattccctgtctggaaactctatatcccacccct
ccccccccagcttttatgatgatgccccccaccgatccacctactcccat
ctcatgcccctaggattctcctatgctggggataatgaaccttctgagta
ccaagggactcccctcctgttgatgccatataaggcaatccccttctata
tataaagctggagccatttgtacatccatgtgtacactttggtttgtgat
tttccccttcgaagctttgtatggtcttgttgttggtattggtgttctcc
tacacagttgcaaggcccttcagcttcttcggtctttccttaactcttca
gtaggccccatgctcaggctatgggaaggcttgcagagaatctgcactct
ttgggccagtctctggatgggcttacgttagccccttttccatttttttc
tcctttttc
gaattctctgatgaatactaagacaggattgttgggtaaagcatttgtca
cattcactgcatttgtaaggtttctctcctgtatgaattctctgatgaat
actaagattggattgtttggtaaagcatttgtcacattcactgcatttgt
aaggtttctctcctgtatgaattctctgatgaattctcagactgcttttt
tcagtaaagcatttgccacattcactgcatttgtaaggtttctctcctgt
atgaattctctgatgcatagtaagattgaatttgtttttaaaacatttgt
cacattcactacatttgtaaattatctcttctgtatgaattccctgatga
atactaagatggatctgatgggtaaagcatttgtcacttttactactttt
gtaaggtttctttccatgataaattctctgctgactttgtaggttttctc
tctgggtaagatatttgtgaaattcactacatttgtaagggttccctgca
atattgtcttttttcaccatgactttatgtttagaaacaaaaatattgtc
taattctgcatttcggttgtgttttttcttctgcatgttaattccttgat
tgagactaatggtagaaaacaaactttaaactgtttacagagtcattgta
tttgcaaacttctttagtgttcctgggcttaagtcttttttggttcgaga
attgaagagcatcagagctgtgattagttttgtaaggtgtacactggagg
gattcaagaatgacattgctaagcttgtcccatttagaagacttctcttg
aatattcatgtgttcatggacaatgtactggctgtcttgatccaatacct
tcccattctttcacgtatgcaatgattttctgaaaaaaaaggggggggca
attagagtgacatgaattacttatattagagtaagggactcaatattcag
tgagcttatggattcgactctcagaaaggttctctctctcctctctctct
ctcctctcttctctctctcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146551003_146552166
seq2: B6Ng01-163B13.b_46_1204

seq1  GAATTCCTGTATCTTTCTTTAGGTTTTCCTACTATGTGCTTTTGTAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTATCTTTCTTTAGGTTTTCCTACTATGTGCTTTTGTAAATG  50

seq1  CTCTGAGATATGCAGAGACTCCTGAATGAGAGAAATTCTAGTTAAAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGATATGCAGAGACTCCTGAATGAGAGAAATTCTAGTTAAAAATC  100

seq1  ATAACTTTTTCATTGTGTTTCCTTCACATTTCTCTGCTTTCTTTGGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTTTTCATTGTGTTTCCTTCACATTTCTCTGCTTTCTTTGGAAAA  150

seq1  ATAACCAGTGCTATATTCTCTGAGATCACTCCTTATCTCTTATCTAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAGTGCTATATTCTCTGAGATCACTCCTTATCTCTTATCTAGCTT  200

seq1  CACTCAAGATAAAAAAGTTCAAGCAAAAATTTAAATATCCAGAACAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAGATAAAAAAGTTCAAGCAAAAATTTAAATATCCAGAACAAGAA  250

seq1  ATTATATTTCTATACATATAATAGTTTCAATTATAAAAATCTTACTATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTTCTATACATATAATAGTTTCAATTATAAAAATCTTACTATTG  300

seq1  CTTTAAAATGTTCCCTTATTTATGAATCTAAAAATATACAAGGTTTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAATGTTCCCTTATTTATGAATCTAAAAATATACAAGGTTTCAAG  350

seq1  TGGACATAGAGCTGTTGTTTTGCACAATTTTTTTTTATTTAACTTTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATAGAGCTGTTGTTTTGCACAATTTTTTTTTATTTAACTTTTTGA  400

seq1  CATTTGATCTCTGTGTTTAGATCTGGGACACCATAATCTTTATCCTAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGATCTCTGTGTTTAGATCTGGGACACCATAATCTTTATCCTAGCA  450

seq1  TTTTGGATATTGAAGCAAATCTATTTAGTAATTTCCCTGAGGCTATCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGATATTGAAGCAAATCTATTTAGTAATTTCCCTGAGGCTATCAGT  500

seq1  TATATCATAAATTTGTACCTGACCAAGTTTATACCTGATTCAGTGTTACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCATAAATTTGTACCTGACCAAGTTTATACCTGATTCAGTGTTACT  550

seq1  CTGAATAAAATTATAACCATAAAATTAGAGATATTTTGTTTAGAATTCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATAAAATTATAACCATAAAATTAGAGATATTTTGTTTAGAATTCTA  600

seq1  CTTTCTGAAAATTCACTAGAGAAGGATCATTTATTTGTCCCAGCTTATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGAAAATTCACTAGAGAAGGATCATTTATTTGTCCCAGCTTATGC  650

seq1  AAAGTACAATTTTCTTTTTTATTGGTCATTTTATTTATTTACATGTCGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACAATTTTCTTTTTTATTGGTCATTTTATTTATTTACATGTCGAT  700

seq1  TGTTATGCCCCTTCTTCATTCCCTGTCTGGAAACTCTATATCCCACCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGCCCCTTCTTCATTCCCTGTCTGGAAACTCTATATCCCACCCCT  750

seq1  CCCCCCCCAGCTTTTATGATGATGCCCCCCACCGATCCACCTACTCCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCAGCTTTTATGATGATGCCCCCCACCGATCCACCTACTCCCAT  800

seq1  CTCATGCCCCTAGGATTCTCCTATGCT-GGGATAATGAACCTTCTGAGTA  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTCATGCCCCTAGGATTCTCCTATGCTGGGGATAATGAACCTTCTGAGTA  850

seq1  CCAAGGGACTCCCCTCCTGTTGATGCCATATAAGGCAATCCCCTTCTATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGGACTCCCCTCCTGTTGATGCCATATAAGGCAATCCCCTTCTATA  900

seq1  TATAAAGCTGGAGCCATTTGTACATCCATGTGTACACTTTGGTTGGTGAT  949
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATAAAGCTGGAGCCATTTGTACATCCATGTGTACACTTTGGTTTGTGAT  950

seq1  TTTCCCCTTCGAAGCTTTGTATGGTCTTGTTGTTTGATATTGTTGTTCCT  999
      |||||||||||||||||||||||||||||||| ||| ||||| |||| ||
seq2  TTTCCCCTTCGAAGCTTTGTATGGTCTTGTTG-TTGGTATTGGTGTT-CT  998

seq1  CCTACACAGTTGCAAAGCCCTTCAGCTTCTTCAGTCCTTCCCTTAACTCC  1049
      ||||||||||||||| |||||||||||||||| || ||| |||||||| |
seq2  CCTACACAGTTGCAAGGCCCTTCAGCTTCTTCGGT-CTTTCCTTAACT-C  1046

seq1  TTCATGTAGCCCCCCTGCTCAGTCTAATGGTTGGC-TGCAGAG-ATCTGC  1097
      |||| |||| |||| ||||||| |||  ||  ||| ||||||| ||||||
seq2  TTCA-GTAGGCCCCATGCTCAGGCTATGGGAAGGCTTGCAGAGAATCTGC  1095

seq1  ATCTCTTTGGTCCAGTCTCTGGATGGCCTTACCTTCAGCCTCTTTTCCAT  1147
      | |||||||| ||||||||||||||| ||||| || |||| |||||||||
seq2  A-CTCTTTGGGCCAGTCTCTGGATGGGCTTACGTT-AGCCCCTTTTCCAT  1143

seq1  TTTTTTCCCTCTTTTTC  1164
      ||||||| | |||||||
seq2  TTTTTTCTC-CTTTTTC  1159

seq1: chr4_147049291_147050309
seq2: B6Ng01-163B13.g_75_1086

seq1  CTGATGAATTCTCAGACTGCTTTTTTCAGTAAAGCATTTGCCACATTCAC  50
      ||||||||| || |||| |  || ||  |||||||||||| |||||||||
seq2  CTGATGAATACTAAGACAGGATTGTTGGGTAAAGCATTTGTCACATTCAC  50

seq1  TGCATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGAATTCTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||| || |||
seq2  TGCATTTGTAAGGTTTCTCTCCTGTATGAATTCTCTGATGAATACTAAGA  100

seq1  CTGCTTTTTTCAGTAAAGCATTTGCCACATTCACTGCATTTGTAAGGTTT  150
       ||  || ||  |||||||||||| |||||||||||||||||||||||||
seq2  TTGGATTGTTTGGTAAAGCATTTGTCACATTCACTGCATTTGTAAGGTTT  150

seq1  CTCTCCTGTATGAATTCTCTGATGAATTCTCAGACTGGTTTTATCAGTAA  200
      ||||||||||||||||||||||||||||||||||||| |||| |||||||
seq2  CTCTCCTGTATGAATTCTCTGATGAATTCTCAGACTGCTTTTTTCAGTAA  200

seq1  AGCATTTGCCACATTCACTGCATTTGTAAGGTTTCTCTCCTTTATGAATT  250
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGCATTTGCCACATTCACTGCATTTGTAAGGTTTCTCTCCTGTATGAATT  250

seq1  CTCTGATGCATAGTAAGATTGAATTTGTTTTTAAAACATTTGTCACATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATGCATAGTAAGATTGAATTTGTTTTTAAAACATTTGTCACATTC  300

seq1  ACTACATTTGTAAATTTTCTCTTCTGTATGAATTCCCTGATGAATACTAA  350
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ACTACATTTGTAAATTATCTCTTCTGTATGAATTCCCTGATGAATACTAA  350

seq1  GATGGATCTGATGGGTAAAGCATTTGTCACTTTTACTACTTTCGTAAGGT  400
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GATGGATCTGATGGGTAAAGCATTTGTCACTTTTACTACTTTTGTAAGGT  400

seq1  TTCTTTCCATGATAAATTCTCTGCTGACTTTGTAGTTTTTCTCTCTGGGT  450
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTCTTTCCATGATAAATTCTCTGCTGACTTTGTAGGTTTTCTCTCTGGGT  450

seq1  AAGATATTTGTGAAATTCACTACATTTGTAAGGGTTCCCTGCAATATTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTTGTGAAATTCACTACATTTGTAAGGGTTCCCTGCAATATTGT  500

seq1  CTTTTTTCACCATGACTTTATGTTTAGAAACAAAAATCTTGTCTAATTCT  550
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTTTTTTCACCATGACTTTATGTTTAGAAACAAAAATATTGTCTAATTCT  550

seq1  GCATTTCGGTTGTGTTTTTTCTTCTGCATGTTAATTCCTTGATTGAGACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTCGGTTGTGTTTTTTCTTCTGCATGTTAATTCCTTGATTGAGACT  600

seq1  AATGGTAGAAAACAAAC-TTAAACTGTTTACAGAGTCATTGTATTTGCAA  649
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATGGTAGAAAACAAACTTTAAACTGTTTACAGAGTCATTGTATTTGCAA  650

seq1  ACTTCTTTAGTGTTCCTGGGCTTAAGTCTTTTTTGGGTCGAGAATTGAAG  699
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACTTCTTTAGTGTTCCTGGGCTTAAGTCTTTTTTGGTTCGAGAATTGAAG  700

seq1  AGCATCAGAGCTGTGATTAGTTTTGTAAGGTGTACACTGGAGGGATTCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAGAGCTGTGATTAGTTTTGTAAGGTGTACACTGGAGGGATTCAA  750

seq1  GAATGACATTGCTAAGCTTGTCCCATTTAGAAGACTTCTCTTGAATATTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACATTGCTAAGCTTGTCCCATTTAGAAGACTTCTCTTGAATATTC  800

seq1  ATGTGTTCATGGACAATGTACTGGCTGTCTTGATCCAATACCTTCCCATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTCATGGACAATGTACTGGCTGTCTTGATCCAATACCTTCCCATT  850

seq1  CTTTCCACGTATGCAATGATTTTCTGAAAAAAAA-GGGGGGGCAATTAGA  898
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTT-CACGTATGCAATGATTTTCTGAAAAAAAAGGGGGGGGCAATTAGA  899

seq1  GGTGACATGAATTACTTATATAAGGAGTAAGGGACTCAATAATCAGTGAG  948
       |||||||||||||||||||| | ||||||||||||||||| ||||||||
seq2  -GTGACATGAATTACTTATATTA-GAGTAAGGGACTCAATATTCAGTGAG  947

seq1  CTTATGGATTCGTACTCTCAAGAAAGGTATCTCTCTCTCTCTCTCTCTCT  998
      |||||||||||| |||||| |||||||| |||||||||| ||||||||||
seq2  CTTATGGATTCG-ACTCTC-AGAAAGGT-TCTCTCTCTC-CTCTCTCTCT  993

seq1  CTCTCTCTCTCTCTCTCTCTC  1019
      ||| |||||| ||||||||||
seq2  CTC-CTCTCT-TCTCTCTCTC  1012