BAC Information

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BAC

Clone NameB6Ng01-163I16
Chromosome4 (Build37)
Map Location 9,511,474 - 9,512,570
singlet/doubletsinglet
Overlap geneAsph
Upstream geneRab2, EG666752, LOC666760, Chd7, LOC666782, LOC100039584, 4933402J24Rik
Downstream geneGdf6, 4930448K20Rik, LOC666840
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163I16.bB6Ng01-163I16.g
ACCDH956100DH956101
length2401,092
definitionDH956100|Mus musculus domesticus DNA, BAC clone: B6Ng01-163I16, 5' end.DH956101|Mus musculus domesticus DNA, BAC clone: B6Ng01-163I16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattttctgtgaatccttgacatttttcctcatttgtttttgtg
acaatattagttctgactggggtgtgataaatctcaatgtaattttaagt
ttcatttccctaattgactgaagatattaaacatcttcttcttaagctta
ttgacaatttacagttcatcttttaagagttgtcagttcatttcaaaagc
tcatttactgattgaggttggggggtgttatttgggtggt
gaattctctctccagcccatgtgtccttagaggcgtggagcgagttagac
ttgcttatttacttttaaacatggatttttctctgtagcccaggctggcc
tggaacttgtggcgagcttcctgcaggaaggaagagtctggggtttggga
tcacatccagccttctgtttccttttatgtaaaatagatttaattatttt
gagcatgatttatataattaaaaataagttacaccaagcacaaaaatgaa
taaaaaaggcatatcaatattttgaacattagttagaaaaatgtaaaaaa
ttaatctccccctattattattattattattattattatcacttattttg
tttgtttttggaaacatggtctctctatataacccttgctgttctggaac
ttgccatataaactaggctggcctcaagtcacagagatcctcctgcctct
gccttcccagtactactgtgtgccattcacatctgtcttcttacaattcc
taaggaatagaactaacaatctcatgtaaggtagtgttaagtgggttgct
gggtttgatgaaactagtatttcaggtaatttatagagtgattctgattg
gctggtgatggctgcagcctctctagctctcgagaaggaaagaaagccag
ctaaagttcacatccacagcttcaagtcagagtaggacatctgagaattc
agcgctagctcatgctggagtgcagggttccgattcagtgtgtggctgtt
tatagctcacagggcaagggctttctctaatggaagtggtttcagagctc
tttggggaagggaggcagtcatgacccacggtaataccacaagtcgcatt
tcacatccaacctctcgaagagagttgatgagttttcttgcccagggact
ggtacattttagctcaggactggtagattttgtggcccatggattggaag
ttttgttgagtttcaaccagagtggccttggacctttactctttactgca
cattagcaccttaaaacaaaaatatatatagcgattcatcttaaagattt
atttttccaaaagagcttcccgagcagtggttggatttcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_9511474_9512570
seq2: B6Ng01-163I16.g_73_1164 (reverse)

seq1  GTTGAAATCAAACACCATGCTCGGAAAAGCTCTTTTGGAAAAAAATAATC  50
      ||||||||| ||| |  |||||||  ||||||||||||||||| | ||||
seq2  GTTGAAATCCAAC-CACTGCTCGG-GAAGCTCTTTTGGAAAAATA-AATC  47

seq1  TTTAAGATGAATCTGCATTTTATTTTTATGTTTT-AGGTGCT-ATGTGCT  98
      ||||||||||||| ||  | ||| ||| |||||| ||||||| |||||| 
seq2  TTTAAGATGAATC-GCTATATATATTTTTGTTTTAAGGTGCTAATGTGCA  96

seq1  GTATAGAGTAAAAGGTCCAAGGCCACTTCTGGGTTTGAAAACTCAACAAA  148
      ||| ||||| |||||||||||||||| |||||  ||| ||||||||||||
seq2  GTAAAGAGT-AAAGGTCCAAGGCCAC-TCTGG--TTG-AAACTCAACAAA  141

seq1  ACCTTCCAATCCATGGGCCCCAAAATCTACCAGTCCCTGAGCTAAAATTG  198
      | ||||||||||||||||| |||||||||||||| |||||||||||| ||
seq2  A-CTTCCAATCCATGGGCCACAAAATCTACCAGT-CCTGAGCTAAAA-TG  188

seq1  TACCAGTCCCTGGGCAGGAAAACTCATC-ACTCTCTTTCGAGAGGTTGGT  247
      |||||||||||||||| ||||||||||| |||||| ||||||||||||| 
seq2  TACCAGTCCCTGGGCAAGAAAACTCATCAACTCTC-TTCGAGAGGTTGGA  237

seq1  TGTGAAATGCGACTTGTGGTATT-CCGTGGGTCCTGACTGCCTCCCTTCC  296
      ||||||||||||||||||||||| ||||||||| ||||||||||||||||
seq2  TGTGAAATGCGACTTGTGGTATTACCGTGGGTCATGACTGCCTCCCTTCC  287

seq1  CC-AAGAGCTCTG-AACCACTTCCATTAGAG-AAGCCCTTGCCCTGTGAG  343
      || |||||||||| ||||||||||||||||| ||||||||||||||||||
seq2  CCAAAGAGCTCTGAAACCACTTCCATTAGAGAAAGCCCTTGCCCTGTGAG  337

seq1  CTAT-AACAGCCACACACTGAATCGGAACCCTGCACTCCAGCATGAGCTA  392
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAACAGCCACACACTGAATCGGAACCCTGCACTCCAGCATGAGCTA  387

seq1  GCGCTGAATTCTCAGATGTCCTACTCTGACTTGAAGCTGTGGATGTGAAC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTGAATTCTCAGATGTCCTACTCTGACTTGAAGCTGTGGATGTGAAC  437

seq1  TTTAGCTGGCTTTCTTTCCTTCTCGAGAGCTAGAGAGGCTGCAGCCATCA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGCTGGCTTTCTTTCCTTCTCGAGAGCTAGAGAGGCTGCAGCCATCA  487

seq1  CCAGCCAATCAGAATCACTCTATAAATTACCTGAAATACTAGTTTCATCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAATCAGAATCACTCTATAAATTACCTGAAATACTAGTTTCATCA  537

seq1  AACCCAGCAACCCACTTAACACTACCTTACATGAGATTGTTAGTTCTATT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGCAACCCACTTAACACTACCTTACATGAGATTGTTAGTTCTATT  587

seq1  CCTTAGGAATTGTAAGAAGACAGATGTGAATGGCACACAGTAGTACTGGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGGAATTGTAAGAAGACAGATGTGAATGGCACACAGTAGTACTGGG  637

seq1  AAGGCAGAGGCAGGAGGATCTCTGTGACTTGAGGCCAGCCTAGTTTATAT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGAGGCAGGAGGATCTCTGTGACTTGAGGCCAGCCTAGTTTATAT  687

seq1  GGCAAGTTCCAGAACAGCAAGGGTTATATAGAGAGACCATGTTTCCAAAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTTCCAGAACAGCAAGGGTTATATAGAGAGACCATGTTTCCAAAA  737

seq1  ACAAACAAAATAAGTGATAATAATAATAATAATAATAATAATAGGGGGAG  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAATAAGTGATAATAATAATAATAATAATAATAATAGGGGGAG  787

seq1  ATTAATTTTTTACATTTTTCTAACTAATGTTCAAAATATTGATATGCCTT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTTTACATTTTTCTAACTAATGTTCAAAATATTGATATGCCTT  837

seq1  TTTTATTCATTTTTGTGCTTGGTGTAACTTATTTTTAATTATATAAATCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCATTTTTGTGCTTGGTGTAACTTATTTTTAATTATATAAATCA  887

seq1  TGCTCAAAATAATTAAATCTATTTTACATAAAAGGAAACAGAAGGCTGGA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAAAATAATTAAATCTATTTTACATAAAAGGAAACAGAAGGCTGGA  937

seq1  TGTGATCCCAAACCCCAGACTCTTCCTTCCTGCAGGAAGCTCGCCACAAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATCCCAAACCCCAGACTCTTCCTTCCTGCAGGAAGCTCGCCACAAG  987

seq1  TTCCAGGCCAGCCTGGGCTACAGAGAAAAATCCATGTTTAAAAGTAAATA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGCCAGCCTGGGCTACAGAGAAAAATCCATGTTTAAAAGTAAATA  1037

seq1  AGCAAGTCTAACTCGCTCCACGCCTCTAAGGACACATGGGCTGGAGAGAG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGTCTAACTCGCTCCACGCCTCTAAGGACACATGGGCTGGAGAGAG  1087

seq1  AATTC  1097
      |||||
seq2  AATTC  1092