BAC Information

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BAC

Clone NameB6Ng01-164F06
Chromosome4 (Build37)
Map Location 4,259,162 - 4,260,234
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC631371, LOC666513, Tmem68, Tgs1, Lyn, LOC621858, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik
Downstream geneLOC100039297, LOC622019, Impad1, LOC100039338
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164F06.bB6Ng01-164F06.g
ACCDH956683DH956684
length1,0821,191
definitionDH956683|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F06, 5' end.DH956684|Mus musculus domesticus DNA, BAC clone: B6Ng01-164F06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctaacttgtctctcagttaaccccttatcaacttcactcagc
agctgattatttccagtatgtttatttattttagtcacattatttagctc
tgtaatttccatttggctccttttgcttgtgagcaagagcacgttgaaac
cactgagctagaccagtctagtgaagacagttcactgagggaatctagac
tgccaactgactcttggtgggtgagtggggcacagaacaacagccagaag
gaaaaccttgttagttttatgaggagacagagaggcaggaggactggtgg
aagccagagcagctgaggtgtttagcatgaggcctttgatctattgtagg
ctatttggtttaatcaggaactagatgccctttgtctgaagtatttggcc
attggggtggaaaaagaaataatggtttttccttacacacagaacatacc
tcacaggatttcttaggaatgttgagtttaggtttttctttatcctatag
cactccttttattaacccaggcagagtccagtctaagctgagcccaggct
gtcatttagaacattgttagcagcactgacattttgggggtctgctttgg
acctaacatccttaacaccttttctgttgttaatgtctattagtcttcat
tggctaagagaatttgtaattaactatcaaaatgtttataatagttacct
taaaatccttctcagataatgccaatttggttggtatggtattggtttat
gctggtattgcttttgatgcttgtcctttctcattcaagatgatattcct
ggttctccaaatggaagggcttttgggcagtggcatcctgagtattttga
ttattcaatttaagagtattctaagtattttcttccttttcatagtagat
tcccttttggtggatttagcccattgaacttgggcctacattttgttatt
cttaaaggtaatcttttgccatgtcttctggtcttctcaattccctgcat
caactgggctctattctgatggtgtcatctaataggagcggcagacattg
gccttgtttgctgtgttactaaatggctcttg
gaattcctttgagtccctgactgagttgtggcaaaggaaagcaccggaga
agtgaatgtaaatcaaagtcccataaagatgggactcctctcactaaaga
agcgggtaagacaaaaaacgatggaattgcatgtttcagttgtaaaaaac
gggggcacctgagtaaggattgtaagaatccctcgggaaacaagaagggc
ctttctctaggtctccgtccaggctgtggtggagagaaccttggaggaat
gaatgattgcaaatcaaagtcccataaagatgagactccgctcactaaat
aagcaggtaagacaaaaaaaaactaaaggggcagtctcttagccccgttc
aggaactgtggacctcattataggacacagccgcagttataagaaaaact
tcaagttgtggattctgatactttaggtaaaattaaaagttatagttaaa
ttatggttaaagtataaaaagagacttcataaaggtcaaaatataggtca
attcttattgttaccttacttacaacttctcaatcctacattgtgccaaa
aattcatagataaggttttataggaagttagtatagagattgtgtgtttt
ctcagaaaattaccctcagattaaataaattggaagttttggatgcttgc
cagaagctgttagaaaattttgggttttaatcttggcttgaaaagctgcc
tctcacaagcaggaaaggaaaaaaggatagaggaaaatagattttagaac
tctcccagggataaagagaaatcaggggacgccctgttttattctctctg
gcccctacaggagaagttctctaccctctttgtattgtctatgtttggtg
caccaatctgtccacatgtcaatccatgtatgtttttgtttcgttgtctg
aatattgaatgttttgtgtttcatgttggaaaataaaatggctaaacttt
atctgctgatcagtggagtgcgagagtggcccacactttagccagatcag
cacagctaggagatccctgctgaaagcttgttttcaagaaaaggatctgc
acctcttagtctagcaatagctgattggttgttgtttttttctagaaatc
tcttgcatcgtgatttgtgttatgcaaatggccaatggcctttatcctga
ttagcttgaaaacaatctctgatggttaaattttaagaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_4259162_4260234
seq2: B6Ng01-164F06.b_48_1129

seq1  GAATTCTCCTAACTTGTCTCTCAGTTAACCCCTTATCAACTTCACTCAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTAACTTGTCTCTCAGTTAACCCCTTATCAACTTCACTCAGC  50

seq1  AGCTGATTATTTCCAGTATGTTTATTTATTTTAGTCACATTATTTAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGATTATTTCCAGTATGTTTATTTATTTTAGTCACATTATTTAGCTC  100

seq1  TGTAATTTCCATTTGGCTCCTTTTGCTTGTGAGCAAGAGCACGTTGAAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTCCATTTGGCTCCTTTTGCTTGTGAGCAAGAGCACGTTGAAAC  150

seq1  CACTGAGCTAGACCAGTCTAGTGAAGACAGTTCACTGAGGGAATCTAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGCTAGACCAGTCTAGTGAAGACAGTTCACTGAGGGAATCTAGAC  200

seq1  TGCCAACTGACTCTTGGTGGGTGAGTGGGGCACAGAACAACAGCCAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAACTGACTCTTGGTGGGTGAGTGGGGCACAGAACAACAGCCAGAAG  250

seq1  GAAAACCTTGTTAGTTTTATGAGGAGACAGAGAGGCAGGAGGACTGGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCTTGTTAGTTTTATGAGGAGACAGAGAGGCAGGAGGACTGGTGG  300

seq1  AAGCCAGAGCAGCTGAGGTGTTTAGCATGAGGCCTTTGATCTATTGTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAGAGCAGCTGAGGTGTTTAGCATGAGGCCTTTGATCTATTGTAGG  350

seq1  CTATTTGGTTTAATCAGGAACTAGATGCCCTTTGTCTGAAGTATTTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGGTTTAATCAGGAACTAGATGCCCTTTGTCTGAAGTATTTGGCC  400

seq1  ATTGGGGTGGAAAAAGAAATAATGGTTTTTCCTTACACACAGAACATACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGTGGAAAAAGAAATAATGGTTTTTCCTTACACACAGAACATACC  450

seq1  TCACAGGATTTCTTAGGAATGTTGAGTTTAGGTTTTTCTTTATCCTATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGATTTCTTAGGAATGTTGAGTTTAGGTTTTTCTTTATCCTATAG  500

seq1  CACTCCTTTTATTAACCCAGGCAGAGTCCAGTCTAAGCTGAGCCCAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTTTTATTAACCCAGGCAGAGTCCAGTCTAAGCTGAGCCCAGGCT  550

seq1  GTCATTTAGAACATTGTTAGCAGCACTGACATTTTGGGGGTCTGCTTTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTAGAACATTGTTAGCAGCACTGACATTTTGGGGGTCTGCTTTGG  600

seq1  ACCTAACATCCTTAACACCTTTTCTGTTGTTAATGTCTATTAGTCTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACATCCTTAACACCTTTTCTGTTGTTAATGTCTATTAGTCTTCAT  650

seq1  TGGCTAAGAGAATTTGTAATTAACTATCAAAATGTTTATAATAGTTACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAAGAGAATTTGTAATTAACTATCAAAATGTTTATAATAGTTACCT  700

seq1  TAAAATCCTTCTCAGATAATGCCAATTTGGTTGGTATGGTATTGGTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCCTTCTCAGATAATGCCAATTTGGTTGGTATGGTATTGGTTTAT  750

seq1  GCTGGTATTGCTTTTGATGCTTGTCCTTTCTCATTCAAGATGATATTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTATTGCTTTTGATGCTTGTCCTTTCTCATTCAAGATGATATTCCT  800

seq1  GGTTCTCCAAATGGAAGGGCTTTTGGGCAGTGGCATCCTGAGTATTTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTCCAAATGGAAGGGCTTTTGGGCAGTGGCATCCTGAGTATTTTGA  850

seq1  TTATTCAATTTAAAGAGTATTCTAAGTA-TTTCTTCCTTTTCATAGTAGA  899
      ||||||||||| |||||||||||||||| |||||||||||||||||||||
seq2  TTATTCAATTT-AAGAGTATTCTAAGTATTTTCTTCCTTTTCATAGTAGA  899

seq1  TTACC-TTTGGTGGATTTAG-CCACTGAACTT-GGCCTACATTT--GTAT  944
      || || |||||||||||||| ||| ||||||| |||||||||||   |||
seq2  TTCCCTTTTGGTGGATTTAGCCCATTGAACTTGGGCCTACATTTTGTTAT  949

seq1  TC-TAAGGGTAATC-TTTGCCATGTCTTCTGGTCTTCTCCATTTCCCTGC  992
      || ||| ||||||| ||||||||||||||||||||||| || ||||||||
seq2  TCTTAAAGGTAATCTTTTGCCATGTCTTCTGGTCTTCT-CAATTCCCTGC  998

seq1  ATCAACTGTGCTCTATCCTGAT-GTGTCATCT-ATAGGAGCGGCAGACAT  1040
      |||||||| ||||||| ||||| ||||||||| |||||||||||||||||
seq2  ATCAACTGGGCTCTATTCTGATGGTGTCATCTAATAGGAGCGGCAGACAT  1048

seq1  T-GCCTTGGTTGCTGTGTTACTAAATGGCTCTTG  1073
      | |||||| |||||||||||||||||||||||||
seq2  TGGCCTTGTTTGCTGTGTTACTAAATGGCTCTTG  1082