BAC Information

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BAC

Clone NameB6Ng01-164I22
Chromosome4 (Build37)
Map Location 77,253,237 - 77,254,387
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667858, LOC667862
Downstream geneLOC100039974, LOC100039996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164I22.bB6Ng01-164I22.g
ACCDH956849DH956850
length1,1421,185
definitionDH956849|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I22, 5' end.DH956850|Mus musculus domesticus DNA, BAC clone: B6Ng01-164I22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattttatcattgagatgtagcatataatgctgcctgtgatatc
atgtaacttaaatataagtcatttttcagcactcgttatttctagtattt
aaatcatatattagtttctttaatactattatgagtgatactcagatgag
attgggtttatttttggctcactgtctcagagatgtttcagaatcccacc
gtgaaataggtatggcagtggaatcgtgaagcagctggagacacggggac
acccgtaaagcaaacaaagaagcaagaaccagaggttcctgatgacctac
ttccataacaggttccatctctagaagctccatagccttcaaattatcac
cttaggtttgtgtctgtggaggatccccttggcacaaactataacaatta
aagtattatatgactaatatcagtagcttcaacataaaggcaaagcggta
ctaataataatcccaatacaagaacattagttattaaaagaatttgttct
gtagtgagtatatttgtgagatctctgatccaataaaatgttaacacttt
ccttttcatctagttatcatctcacaaactctatatcttttctaggtgac
tacataactcactgtgcactgtaatttctggaagtttgcactctaataat
tgtctttggaattttgtactgtaagcagccacccaaacatatacccaagc
atatacacacgtgcacttaagtctttgaaaatgcttctactaagaagcag
tagctttgttcttgttctgcttagcacttacagtcttataatgaagagca
ttctcatactgggaatcttcacgggcaggtaagagtatgactggacacat
gcagtactgagttgaggctgacatggtcctgcactgataaaactccattt
tctcatcaccagacatcaggaacagtgacatgaatttttaaaaccatctt
acaggataagatggtcacagtgaaagttctaagaacttgcttctatggag
cataagcactttcacatctgctctctcatattcccttctcttatgaaact
ttcttttttctaagtcttcttatcgtatcagaacaaaggagaagtagagc
tagggcaggattctaactgtttgattctgaagtgccacagta
gaattcaataactcacttaaagaaatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcga
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagt
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcggcacaacaatcaaagaaaatggaaaatgcaaaa
agatcctaactcaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaacatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacaccaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaaaccaata
caggacgggaaccacgcctagaaaaacaagaagatatccctcaacaacct
taaagaagacagccacagaacagaatgccaactttaacacaaaaatatag
aagcacaattacctttctaatatctcttatatcaatggactcatcccatg
agactagactaacgactggctaccaacagaatccacatctgcttgcttac
aggaacccctatcttctcaggaaaaaggatactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_77253237_77254387
seq2: B6Ng01-164I22.b_45_1186 (reverse)

seq1  TACTGTGGGCAC-TCAGAATCAAACCAGGTTAGATCCCTGCCCTAGGCTC  49
      |||||| ||||| ||||||||||||   ||||||  ||||||||| ||||
seq2  TACTGT-GGCACTTCAGAATCAAAC--AGTTAGAATCCTGCCCTA-GCTC  46

seq1  TGACTTCCTCTTTTGTTCTGATAACGATA--GAGAATTAGAAAAAGAAAG  97
      | |||| ||| ||||||||||| ||||||   ||| |||||||||  || 
seq2  T-ACTT-CTCCTTTGTTCTGAT-ACGATAAGAAGACTTAGAAAAAAGAAA  93

seq1  GTTTCATAAGAGAAGGGAAATATTGGAGAGAGCAGATGTGAAAGTGCTTA  147
      ||||||||||||||||| |||||  |||||||||||||||||||||||||
seq2  GTTTCATAAGAGAAGGG-AATAT--GAGAGAGCAGATGTGAAAGTGCTTA  140

seq1  TGCTCCCTTAGAAGCAAGTTCTTAGAACTTTCACTGTGACCATCTTATCC  197
      |||| || ||||||||||||||||||||||||||||||||||||||||||
seq2  TGCT-CCATAGAAGCAAGTTCTTAGAACTTTCACTGTGACCATCTTATCC  189

seq1  TTGTAAGATGGTTTTAAAAATTCATGTCACTGTTCCTGATGTCTGGTGAT  247
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TGTAAGATGGTTTTAAAAATTCATGTCACTGTTCCTGATGTCTGGTGAT  238

seq1  GAGAAAATGGAGTTTTATCAGTGCAGGACCATGTCAGCCTCAACTCAGTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAATGGAGTTTTATCAGTGCAGGACCATGTCAGCCTCAACTCAGTA  288

seq1  CTGCATGTGTCCAGTCATACTCTTACCTGCCCCTGAAGATTCCCAGTATG  347
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CTGCATGTGTCCAGTCATACTCTTACCTGCCCGTGAAGATTCCCAGTATG  338

seq1  AGAATGCTCTTCATTATAAGACTGTAAGTGCTAAGCAGAACAAGAACAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCTCTTCATTATAAGACTGTAAGTGCTAAGCAGAACAAGAACAAA  388

seq1  GCTACTGCTTCTTAGTAGAAGCATTTTCAAAGACTTAAGTGCACGTGTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGCTTCTTAGTAGAAGCATTTTCAAAGACTTAAGTGCACGTGTGT  438

seq1  ATATGCTTGGGTATATGTTTGGGTGGCTGCTTACAGTACAAAATTCCAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTTGGGTATATGTTTGGGTGGCTGCTTACAGTACAAAATTCCAAA  488

seq1  GACAATTATTAGAGTGCAAACTTCCAGAAATTACAGTGCACAGTGAGTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTATTAGAGTGCAAACTTCCAGAAATTACAGTGCACAGTGAGTTA  538

seq1  TGTAGTCACCTAGAAAAGATATAGAGTTTGTGAGATGATAACTAGATGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCACCTAGAAAAGATATAGAGTTTGTGAGATGATAACTAGATGAA  588

seq1  AAGGAAAGTGTTAACATTTTATTGGATCAGAGATCTCACAAATATACTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGTGTTAACATTTTATTGGATCAGAGATCTCACAAATATACTCA  638

seq1  CTACAGAACAAATTCTTTTAATAACTAATGTTCTTGTATTGGGATTATTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGAACAAATTCTTTTAATAACTAATGTTCTTGTATTGGGATTATTA  688

seq1  TTAGTACCGCTTTGCCTTTATGTTGAAGCTACTGATATTAGTCATATAAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACCGCTTTGCCTTTATGTTGAAGCTACTGATATTAGTCATATAAT  738

seq1  ACTTTAATTGTTATAGTTTGTGCCAAGGGGATCCTCCACAGACACAAACC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAATTGTTATAGTTTGTGCCAAGGGGATCCTCCACAGACACAAACC  788

seq1  TAAGGTGATAATTTGAAGGCTATGGAGCTTCTAGAGATGGAACCTGTTAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGATAATTTGAAGGCTATGGAGCTTCTAGAGATGGAACCTGTTAT  838

seq1  GGAAGTAGGTCATCAGGAACCTCTGGTTCTTGCTTCTTTGTTTGCTTTAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAGGTCATCAGGAACCTCTGGTTCTTGCTTCTTTGTTTGCTTTAC  888

seq1  GGGTGTCCCCGTGTCTCCAGCTGCTTCACGATTCCACTGCCATACCTATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTCCCCGTGTCTCCAGCTGCTTCACGATTCCACTGCCATACCTATT  938

seq1  TCACGGTGGGATTCTGAAACATCTCTGAGACAGTGAGCCAAAAATAAACC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGGTGGGATTCTGAAACATCTCTGAGACAGTGAGCCAAAAATAAACC  988

seq1  CAATCTCATCTGAGTATCACTCATAATAGTATTAAAGAAACTAATATATG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTCATCTGAGTATCACTCATAATAGTATTAAAGAAACTAATATATG  1038

seq1  ATTTAAATACTAGAAATAACGAGTGCTGAAAAATGACTTATATTTAAGTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATACTAGAAATAACGAGTGCTGAAAAATGACTTATATTTAAGTT  1088

seq1  ACATGATATCACAGGCAGCATTATATGCTACATCTCAATGATAAAATTGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATATCACAGGCAGCATTATATGCTACATCTCAATGATAAAATTGA  1138

seq1  ATTC  1151
      ||||
seq2  ATTC  1142