BAC Information

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BAC

Clone NameB6Ng01-164M10
Chromosome4 (Build37)3 (Build37)
Map Location 16,520,443 - 16,521,602112,140,754 - 112,141,151
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100040095, LOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164M10.bB6Ng01-164M10.g
ACCDH957011DH957012
length1,1521,012
definitionDH957011|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M10, 5' end.DH957012|Mus musculus domesticus DNA, BAC clone: B6Ng01-164M10, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(16,520,443 - 16,521,602)(112,140,754 - 112,141,151)
sequence
gaattcacttttcacagtggtagcagcttgaagccttaaaataaggagcc
acgaaaaccagcttttgttctccttgacttttattatgagggctctaatc
ccattcacaaagccttcacttttatgaccttatcagctcccaaaagttat
tttttaaaatatatttttaccctctgtagatttttctcatataaaattct
atctaaattttctttaataagaaaactttatataaatttgagtttagttg
aggctgggaatatagcctagtaggcaaagcatcagcacacagataaacac
ctagacatgtaataagtgtctgtgatcccagcattgaggaagtagagaca
ggaggatcctcagtgcttggtggctggtaatcttgcttattcagtttttt
caaggttcaatgagagactctgtgtccaaaatcaaggcagaaagcaatag
aggaaggaatccaatataaatctctggcttctaaatgtacatgaatatat
acgtgaaatatttacgtgtatatgccacagtcacttgaacaaatgtactg
cacacaaattcattaatatacacacatatatatatatattcatatataca
tatatacatacaaacacatactcatggacatgcacacacactttgttttc
tatttttttcctttccctaatttttcttttattattttcttcatttacat
ttcaaatgctatcccggaagtctgctataccctcccccatcctgcccccc
tacacacccactcctacatcttggccctggtgttcccctgtactggggca
tataaagtttgcaagaccaaagggcctctcttcctaatgatgactgacta
tgccatcttctgttacatatgcagccagagacatgagctctgggggtact
ggttagttgataatgttgttccacctatagggttgcagaccacttcaact
ccttgtgtactttctctagccctccattgggggccttgtattccatccag
tagctgactatgaacacccaattctgtgtttgccagtcactggcatagcc
tccaagagacagctatatcaggttctttcagtaaaatcttgcttgataat
gcatactgtccgcattgtaggatatatgggataagaccttggggtaccag
tc
gaattcttaggaattaaagggcattattctcagctctttttgtgcctcct
tcattggttaatgagttcattttctcttggtatcacaaagtacctaagac
tgggttttatatttaaagaaagaaaagaggtatacttagccctcaatttg
gaaggctcaaagatgaagatcagaggacttcagagataatttagtcagtg
aaggacttgtcttacagccaagagaacctaaattaaagcttcagaattta
ggtaaaaataccagatgtgattttcaatcacagcaaccgtgacatgaaga
gggaagctgacctaggccttactgtttagcctagtttgtgagttccaggc
cattaagatatgttatcttaaggggagtgaatggtgtttctgaggagagc
acctcaagttgttctatggtttccacaatatgtaacttctattatattca
tgggcacacacacacacacacacacacaaacacacacacacacacacaca
cacaccacacacacacatgatcataggcactcatacaaataactatacat
acttatattaaaaaaaaagaagtcgcccttccgctcgactcgagactcga
gccccgggctaacttgccagcagagtcttgcccaacacccgcaagggccc
acacgggactccccacgggaccctaagacctctggtgagtggaccacagt
gcctgccccaatccaatcgcgcggaacttgagactgcggtacatagggaa
gcaggctacccgggcctgatctggggcacaagtcccttccgctcgactcg
agactcgagccccgggctaccttgccagcagagtctttcccaacacccgc
aagggtccacacgggactccccacgggaccctaagacctctggtgagtga
tcacagtgcctgccccatccaatcgcgcggaacttgagactgcagtacat
agggaagcaggctacccgggcctgatctggggcaataagtcccttccgct
cgactcgagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16520443_16521602
seq2: B6Ng01-164M10.b_46_1197

seq1  GAATTCACTTTTCACAGTGGTAGCAGCTTGAAGCCTTAAAATAAGGAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTCACAGTGGTAGCAGCTTGAAGCCTTAAAATAAGGAGCC  50

seq1  ACGAAAACCAGCTTTTGTTCTCCTTGACTTTTATTATGAGGGCTCTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAACCAGCTTTTGTTCTCCTTGACTTTTATTATGAGGGCTCTAATC  100

seq1  CCATTCACAAAGCCTTCACTTTTATGACCTTATCAGCTCCCAAAAGTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCACAAAGCCTTCACTTTTATGACCTTATCAGCTCCCAAAAGTTAT  150

seq1  TTTTTAAAATATATTTTTACCCTCTGTAGATTTTTCTCATATAAAATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAATATATTTTTACCCTCTGTAGATTTTTCTCATATAAAATTCT  200

seq1  ATCTAAATTTTCTTTAATAAGAAAACTTTATATAAATTTGAGTTTAGTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAATTTTCTTTAATAAGAAAACTTTATATAAATTTGAGTTTAGTTG  250

seq1  AGGCTGGGAATATAGCCTAGTAGGCAAAGCATCAGCACACAGATAAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGGAATATAGCCTAGTAGGCAAAGCATCAGCACACAGATAAACAC  300

seq1  CTAGACATGTAATAAGTGTCTGTGATCCCAGCATTGAGGAAGTAGAGACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGACATGTAATAAGTGTCTGTGATCCCAGCATTGAGGAAGTAGAGACA  350

seq1  GGAGGATCCTCAGTGCTTGGTGGCTGGTAATCTTGCTTATTCAGTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGATCCTCAGTGCTTGGTGGCTGGTAATCTTGCTTATTCAGTTTTTT  400

seq1  CAAGGTTCAATGAGAGACTCTGTGTCCAAAATCAAGGCAGAAAGCAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTCAATGAGAGACTCTGTGTCCAAAATCAAGGCAGAAAGCAATAG  450

seq1  AGGAAGGAATCCAATATAAATCTCTGGCTTCTAAATGTACATGAATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGAATCCAATATAAATCTCTGGCTTCTAAATGTACATGAATATAT  500

seq1  ACGTGAAATATTTACGTGTATATGCCACAGTCACTTGAACAAATGTACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGAAATATTTACGTGTATATGCCACAGTCACTTGAACAAATGTACTG  550

seq1  CACACAAATTCATTAATATACACACATATATATATATATTCATATATACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAATTCATTAATATACACACATATATATATATATTCATATATACA  600

seq1  TATATACATACAAACACATACTCATGGACATGCACACACACTTTGTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATACAAACACATACTCATGGACATGCACACACACTTTGTTTTC  650

seq1  TATTTTTTTCCTTTCCCTAATTTTTCTTTTATTATTTTCTTCATTTACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTCCTTTCCCTAATTTTTCTTTTATTATTTTCTTCATTTACAT  700

seq1  TTCAAATGCTATCCCGGAAGTCTGCTATACCCTCCCCCATCCTGCCCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGCTATCCCGGAAGTCTGCTATACCCTCCCCCATCCTGCCCCCC  750

seq1  TACACACCCACTCCTACATCTTGGCCCTGGTGTTCCCCTGTACTGGGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACCCACTCCTACATCTTGGCCCTGGTGTTCCCCTGTACTGGGGCA  800

seq1  TATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCTAATGATGACTGACTA  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TATAAAGTTTGCAAGACCAAAGGGCCTCTCTTCCTAATGATGACTGACTA  850

seq1  TGCCATCTTCTGTTACATATGCAGCCAGAGACATGAGCTCTGGGGGTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTTCTGTTACATATGCAGCCAGAGACATGAGCTCTGGGGGTACT  900

seq1  GGTTAGTTGATAATGTTGTTCCACCTATAGGGTTGCAGACCACTTCAACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGTTGATAATGTTGTTCCACCTATAGGGTTGCAGACCACTTCAACT  950

seq1  CCTTGTGTACTTTCTCTAGCCCCTCCATTGGGGGCCTTGTATTCCATCCA  1000
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTTGTGTACTTTCTCTAG-CCCTCCATTGGGGGCCTTGTATTCCATCCA  999

seq1  GTAGCTGACTATGAACACCCATTTCTGTGTTTGCCAGTCACTGGCATAGC  1050
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GTAGCTGACTATGAACACCCAATTCTGTGTTTGCCAGTCACTGGCATAGC  1049

seq1  CTCACAAGAGACAGCTATATCAGGGTCCTTTCAGTAAAATCTTGCTGGTA  1100
      ||| |||||||||||||||||| ||| ||||||||||||||||||| |  
seq2  CTC-CAAGAGACAGCTATATCA-GGTTCTTTCAGTAAAATCTTGCTTGAT  1097

seq1  TATGCAATACTGTCTGCATTTGGTAGGTGATTATGGGATAGACCCCTGGG  1150
       |||| |||||||| |||||  |||||  | ||||||||| |  ||| ||
seq2  AATGC-ATACTGTCCGCATT--GTAGGATA-TATGGGATA-AGACCTTGG  1142

seq1  TGTACCAGTC  1160
       |||||||||
seq2  GGTACCAGTC  1152

seq1: chr3_112140754_112141151
seq2: B6Ng01-164M10.g_645_1040 (reverse)

seq1  GCCCGGGTAGCCTGCTTCCCTATGTACCGCAGTCTCAAGTTCCATGCGAT  50
      ||||||||||||||||||||||||||| |||||||||||||||  |||||
seq2  GCCCGGGTAGCCTGCTTCCCTATGTACTGCAGTCTCAAGTTCCGCGCGAT  50

seq1  TGGATTGGGGTAGGCGCTGTGTTCCACTCACCAGAGGTCTTAGGGTCCCG  100
      |||| ||||| |||| ||||| | ||||||||||||||||||||||||||
seq2  TGGA-TGGGGCAGGCACTGTGAT-CACTCACCAGAGGTCTTAGGGTCCCG  98

seq1  TGGGGAGTCCCGTGTGGGCCCTTGCGGGTGTTGGGCAAGACTCTGCTGTC  150
      ||||||||||||||||| ||||||||||||||||| |||||||||||| |
seq2  TGGGGAGTCCCGTGTGGACCCTTGCGGGTGTTGGGAAAGACTCTGCTGGC  148

seq1  AAGGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCGGAAGGGACTTGTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCGGAAGGGACTTGTGCCC  198

seq1  CAGATCAGGCCCGGGTAGCCTGCTTCCCTATGTACCGCAGTCTCAAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCAGGCCCGGGTAGCCTGCTTCCCTATGTACCGCAGTCTCAAGTTC  248

seq1  CGCGCGATTGGATTGGGGCAGGCACTGTGATCCACTCACCAGAGGTCTTA  300
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CGCGCGATTGGATTGGGGCAGGCACTGTGGTCCACTCACCAGAGGTCTTA  298

seq1  GGGTCCCGTGGGGAGTCCCGTGTGGACCCTTGCGGGTGTTGGGCAAGACT  350
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGGTCCCGTGGGGAGTCCCGTGTGGGCCCTTGCGGGTGTTGGGCAAGACT  348

seq1  CTGCTGGCAAGGTAGCCCGGGGCTCGAGTCTCGAGTCGAGCGGAAGGG  398
      ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGCAAGTTAGCCCGGGGCTCGAGTCTCGAGTCGAGCGGAAGGG  396