MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-165A14
Chromosome	4 (Build37)
Map Location	112,680,965 - 112,682,091
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC639781, 9530098N22Rik, A430090E18Rik, A030013N09Rik, LOC665949, LOC630887, OTTMUSG00000008540, LOC100040581, A030001H23Rik, LOC433745, LOC545668
Downstream gene	LOC230622, LOC100040607, LOC242627
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC639781 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:639781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	9530098N22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320640 MGI:2444425
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A430090E18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:195564 MGI:3045331
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A030013N09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329918 MGI:3045341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665949 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665949
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC630887 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:630887
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	OTTMUSG00000008540 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329919 MGI:3649629
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040581 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040581
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	A030001H23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230613 MGI:2685416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433745 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 mRNAs, 2754 ESTs, 17 Proteins

name	LOC545668 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545668
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 4 Proteins pseudo : _no_value

name	LOC230622 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:230622
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins

name	LOC100040607 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040607
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein pseudo : _no_value

name	LOC242627 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:242627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins

name	LOC639781 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252853 GeneID:639781
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : hypothetical LOC639781 transcript_id : XM_001474878.1

name	9530098N22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385268 GeneID:320640 MGI:2444425
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9530098N22 gene transcript_id : NM_178786.3

name	A430090E18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387664 GeneID:195564 MGI:3045331
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A430090E18 gene transcript_id : NM_177578.3

name	A030013N09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342817 GeneID:329918 MGI:3045341
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A030013N09 gene transcript_id : NM_177864.2

name	OTTMUSG00000008540 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378009 GeneID:329919 MGI:3649629
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, OTTMUSG00000008540 transcript_id : NM_177865.3

name	A030001H23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157500 GeneID:230613 MGI:2685416
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A030001H23 gene transcript_id : NM_177668.2

name	LOC433745 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252851 GeneID:433745
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 1665 ESTs, 4 Proteins product : similar to ribosomal protein L3 transcript_id : XM_001475733.1

name	LOC230622 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252856 GeneID:230622
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 4 Proteins product : hypothetical LOC230622 transcript_id : XM_144000.8

name	LOC242627 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252859 GeneID:242627
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 3 Proteins product : hypothetical protein LOC242627 transcript_id : XM_144002.6

name	LOC639781 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252854 GeneID:639781
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474928.1

name	9530098N22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520259 GeneID:320640 MGI:2444425
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC320640 protein_id : NP_848901.1

name	A430090E18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243928 GeneID:195564 MGI:3045331
definition	codon_start : 1 note : novel protein containing an Immunoglobulin domain product : hypothetical protein LOC195564 protein_id : NP_808246.1

name	A030013N09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244462 GeneID:329918 MGI:3045341
definition	codon_start : 1 product : butyrophilin-like protein protein_id : NP_808532.1

name	OTTMUSG00000008540 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244464 GeneID:329919 MGI:3649629
definition	codon_start : 1 note : novel protein containing an Immunoglobulin domain product : hypothetical protein LOC329919 protein_id : NP_808533.1

name	A030001H23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46810291 GeneID:230613 MGI:2685416
definition	codon_start : 1 product : hypothetical protein LOC230613 protein_id : NP_808336.1

name	LOC433745 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252852 GeneID:433745
definition	codon_start : 1 product : similar to ribosomal protein L3 protein_id : XP_001475783.1

name	LOC230622 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252857 GeneID:230622
definition	codon_start : 1 product : hypothetical protein protein_id : XP_144000.8

name	LOC242627 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252860 GeneID:242627
definition	codon_start : 1 product : hypothetical protein protein_id : XP_144002.6

name	LOC665949 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665949
definition	number : 1 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 1 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 2 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 3 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 4 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 5 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 6 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 7 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 8 pseudo : _no_value

name	LOC630887 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:630887
definition	number : 9 pseudo : _no_value

name	LOC100040581 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040581
definition	number : 1 pseudo : _no_value

name	LOC100040581 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040581
definition	number : 2 pseudo : _no_value

name	LOC545668 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252855 GeneID:545668
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 4 Proteins product : similar to Minpp1 protein pseudo : _no_value transcript_id : XR_032007.1

name	LOC100040607 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252858 GeneID:100040607
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : hypothetical protein LOC100040607 pseudo : _no_value transcript_id : XR_032022.1

clone name	MSMg01-436J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078M23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-527G17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-306F12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-328J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356I15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-524E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074J16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-151E19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-048K05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-142K10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-302F03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-334G15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-090G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-526N21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-211O12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-384I11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-396I05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309D21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-422P19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-091E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535G08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-406A17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-360G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-429I01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-545P16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-296D10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534N22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-353H02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-548P07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-345K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513P08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346I06
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-214I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336C11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161G07
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-165A14.b	B6Ng01-165A14.g
ACC	DH957202	DH957203
length	1,119	981
definition	DH957202\|Mus musculus domesticus DNA, BAC clone: B6Ng01-165A14, 5' end.	DH957203\|Mus musculus domesticus DNA, BAC clone: B6Ng01-165A14, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcacatcatggcctaaaaatgaaaattatataattgggagttgaaa gaaacattacattgggaagataaagggaaggtggagcagaaatttaggaa agagaagaaggagaaaatggaaatgggagaggacacagaggaagtggcag aaaaaaagcagtgcagaaacaaatggtctggagaatatacaagttctaaa cagtgaaatagatgtagactatgggagtatagtggtagatcggcccaatc taggcacagagtatatattcatattaattgcattgtgttttcattgctgg agcatttttgggttggaaatttactccaactaaatggcaccccacatatt gatttgaactaaactaacctaagataacaattccctgcctccaaggcatg agtgggtcgtgtgcagcaatgtaggctgcagcaggcaagactcaaacgtg gctggttttgaggatttactgaggatggtatagaggcatctacacagcct ttctgtgttcatgtccccctatccttcacaccctaccctgtctcccacat gcaaaaaaagggacacagacaatgtgggtctttttacactcagctcctcc ctgagaataaagaatcaggtaataaatgtacaagggctctggaccagaaa attcactgttataaagagagaaatataacttttggtacttaaatatggga aatttcacctgcagttctgaaatagatggggaacattagccactgactcc aagtagagagagtggtaataatcacctgctatgaacgggtattaattaat agaagactgtggatccaggtagaaagcataacagatagatagtataatat gtattaattaaataaatgtctttggctcaagatagagagcataaaaaata gatgttataacaggttggctgcactaggtgtggagagcttacaattaaaa actagctgtttcctataggcagatattagtgaagtttgaaataattgttt taaaattgtataaagatatattgctctaataatcttacatgaatatttaa atttgtctaaatggctccatcgaatttggttttaaatcctgttttaaagt ggccttcttttaagcatgt	gaattctgttcttgtggctgtcttctttttggtttgttgagggattactt tcttgcttgttctagggcgtgatttccatcctttcattgcttcttttctg ttattgtcatttgaagggctggattcgtggaaagatattgtgtgaatttg gttttgtcgtggaatactttggtttccccatctatggtaattgaaagttt ggctgggtatagtagcctgggctggcatttgtgttctcttagtgtctgta taacatctgtccagtatcttctggctttcatagtctctggtgaaaagtct ggtgtaattctgataggccttcttttatatgttacttgacctttctccct tactgcttttaatattctatctttctttagtgcatttgttgttctgatta ttatgtgtcgggaggaatttcttttctggtccagtctatttggagttctg taggcttcttgtatgatcatgagcatctctttctttatgtttgggaagtt ttcttctattattttgttgaagatattagctggccctttaagttgaaaat cttcattctcatccactcctattatccgtgggtttggtcttctcattatg tcctggatttcctggatgttttgagttaagatccttttgcattttgtatt ttctttgactgttgtgtcgatattccctatggaatcttctgcacctgaga ttctctcttccatttcttgtattctgtttctgatgctcgcatctatggtt ccagatctctttcctagggtttctatctccagcgttgcctcactttgggt tttcttaattgtgtctacttccctttttagttctagtatggtttgttcat ttccatcacctgtttggatgtgtttcctgttttctttaaggacttctacc tgttggtgtgttttcctgcttttctttaagggcctgtactccttagcagg gctcttctggaattgtttagtgacttaagga
quality values	Open. Hide. 61 43 28 37 61 36 25 61 39 61 43 47 61 61 61 61 61 61 61 61 61 61 61 47 61 61 28 28 34 24 19 26 28 21 37 27 27 55 55 55 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 55 55 55 59 59 59 59 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 43 61 61 61 61 61 61 61 61 61 61 53 61 61 50 61 61 61 61 61 61 61 50 61 61 61 61 61 61 53 61 53 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 53 61 53 61 61 61 61 61 52 61 61 61 61 61 61 61 61 57 57 45 57 53 57 57 57 53 57 57 57 53 57 53 53 57 57 53 45 57 53 53 46 57 53 43 57 53 57 45 57 57 57 53 57 57 57 57 57 53 45 53 53 57 57 57 45 53 53 53 53 57 47 57 57 53 57 53 57 34 57 34 38 53 57 57 53 57 53 45 57 50 53 57 45 57 52 45 50 57 53 53 52 52 45 50 45 52 50 57 52 38 53 53 45 53 57 47 37 57 36 33 57 57 57 50 24 52 50 40 52 53 57 34 53 39 52 37 57 52 37 53 42 53 39 43 57 38 30 38 50 36 47 50 53 57 57 53 53 37 31 40 45 34 53 43 57 53 50 42 38 43 41 33 50 57 32 24 41 57 37 30 50 57 38 53 42 40 35 37 53 50 38 20 27 57 33 40 32 33 41 32 53 57 53 52 37 35 24 28 37 40 35 29 40 40 30 40 33 40 33 37 52 44 53 28 36 33 36 36 24 53 37 52 24 52 27 28 41 46 30 37 37 37 41 37 37 53 27 24 53 40 48 30 37 31 30 30 40 36 37 34 57 51 30 23 22 53 41 40 32 53 37 41 32 30 30 38 33 24 31 19 30 46 27 46 24 27 28 35 47 29 48 25 29 29 21 30 46 30 25 32 27 40 28 31 29 23 31 33 19 29 28 29 31 44 29 26 34 29 30 34 29 24 29 39 23 35 29 36 29 33 27 33 24 51 39 33 34 51 29 28 33 15 43 29 51 29 29 28 20 35 34 19 33 21 29 22 33 20 43 30 29 27 28 29 28 29 51 51 51 51 35 31 34 15 28 22 33 13 29 23 29 26 18 28 12 27 29 26 28 31 34 31 28 25 19 20 28 23 22 23 28 10 11 10 12 31 29 16 28 18 29 34 14 31 22 20 28 24 33 26 51 51 51 19 17 18 36 22 34 30 24 14 51 29 22 26 31 34 28 20 14 28 25 27 19 24 7 7 5 25 21 9 12 8 12 11 6 4 34 16 22 22 39 28 27 9 24 7 8 29 8 33 35 18 7 31 39 20 23 19 30 9 20 12 4 44 13 9 20 7 5 6 17 26 12 20 13 10 18 21 31 17 14 14 25 18 4 6 26 20 9 5 20 29 20 6 4 7 16 30 13 15 42 13 22 24 10 25 9 18 13 26 37 28 9 22 14 9 15 24 22 6 10 6 20 11 16 14 32 17 3 14 5 12 25 17 8 27 13 4 9 4 3 7 6 18 16 18 13 24 14 8 19 6 7 21 16 8 7 7 14 12 4 4 4 24 7 12 11 4 7 2	Open. Hide. 61 47 55 47 61 55 18 20 14 15 20 31 34 22 20 41 47 49 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 52 59 35 43 43 44 49 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 47 53 53 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 53 61 61 61 53 61 47 53 61 61 61 61 61 43 61 61 61 61 50 61 42 53 61 53 61 50 61 61 61 61 50 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 53 61 61 61 61 45 47 61 61 52 52 39 53 61 37 33 61 61 61 61 53 52 45 52 50 53 61 57 53 39 57 47 57 35 53 53 57 57 45 57 53 57 53 43 53 52 53 52 50 47 53 50 57 53 52 53 37 47 32 46 50 53 57 50 57 32 53 34 57 42 53 53 53 38 53 38 38 43 38 53 40 53 42 57 57 50 57 57 57 52 40 45 50 57 57 53 46 33 53 33 57 57 42 53 53 57 57 50 53 37 42 57 30 45 53 34 57 30 48 37 50 35 40 41 45 53 57 53 38 50 38 53 45 40 48 36 53 38 52 53 50 31 35 32 43 32 43 47 57 32 41 46 52 53 45 32 36 41 47 47 18 14 13 7 13 16 52 50 50 36 11 50 43 23 37 33 53 47 53 37 53 38 30 40 27 42 36 53 50 27 38 33 42 50 37 37 42 40 53 17 18 21 52 28 21 33 21 42 53 39 36 57 52 36 52 29 40 24 57 52 29 57 25 47 31 35 35 41 40 38 33 29 37 48 33 28 36 37 32 33 40 36 24 32 37 57 41 32 57 29 20 57 57 26 41 23 37 30 27 26 25 22 11 22 9 44 22 29 38 30 30 44 48 46 30 47 46 46 36 34 25 21 29 32 17 31 22 13 36 17 33 30 33 45 27 14 10 32 29 15 29 48 33 34 39 28 31 35 33 35 47 27 43 7 47 27 30 16 34 15 46 12 37 28 30 46 16 29 27 43 30 41 39 25 32 20 27 5 23 16 26 25 25 21 17 27 19 26 33 15 27 23 36 21 21 14 14 12 9 11 29 26 41 46 25 33 9 8 15 8 11 6 43 19 29 27 46 19 23 20 29 51 15 20 24 21 31 20 36 14 14 9 6 12 7 20 9 31 29 8 8 15 14 9 6 12 16 8 12 16 10 16 19 25 28 24 9 38 13 33 11 6 10 12 9 5 10 5 8 5 5 5

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_112680965_112682091
seq2: B6Ng01-165A14.b_48_1166

seq1  GAATTCACATCATGGCCTAAAAATGAAAATTATATAATTGGGAGTTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCATGGCCTAAAAATGAAAATTATATAATTGGGAGTTGAAA  50

seq1  GAAACATTACATTGGGAAGATAAAGGGAAGGTGGAGCAGAAATTTAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTACATTGGGAAGATAAAGGGAAGGTGGAGCAGAAATTTAGGAA  100

seq1  AGAGAAGAAGGAGAAAATGGAAATGGGAGAGGACACAGAGGAAGTGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAAGGAGAAAATGGAAATGGGAGAGGACACAGAGGAAGTGGCAG  150

seq1  AAAAAAAGCAGTGCAGAAACAAATGGTCTGGAGAATATACAAGTTCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGCAGTGCAGAAACAAATGGTCTGGAGAATATACAAGTTCTAAA  200

seq1  CAGTGAAATAGATGTAGACTATGGGAGTATAGTGGTAGATCGGCCCAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAATAGATGTAGACTATGGGAGTATAGTGGTAGATCGGCCCAATC  250

seq1  TAGGCACAGAGTATATATTCATATTAATTGCATTGTGTTTTCATTGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCACAGAGTATATATTCATATTAATTGCATTGTGTTTTCATTGCTGG  300

seq1  AGCATTTTTGGGTTGGAAATTTACTCCAACTAAATGGCACCCCACATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTTGGGTTGGAAATTTACTCCAACTAAATGGCACCCCACATATT  350

seq1  GATTTGAACTAAACTAACCTAAGATAACAATTCCCTGCCTCCAAGGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAACTAAACTAACCTAAGATAACAATTCCCTGCCTCCAAGGCATG  400

seq1  AGTGGGTCGTGTGCAGCAATGTAGGCTGCAGCAGGCAAGACTCAAACGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGTCGTGTGCAGCAATGTAGGCTGCAGCAGGCAAGACTCAAACGTG  450

seq1  GCTGGTTTTGAGGATTTACTGAGGATGGTATAGAGGCATCTACACAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTTTGAGGATTTACTGAGGATGGTATAGAGGCATCTACACAGCCT  500

seq1  TTCTGTGTTCATGTCCCCCTATCCTTCACACCCTACCCTGTCTCCCACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTTCATGTCCCCCTATCCTTCACACCCTACCCTGTCTCCCACAT  550

seq1  GCAAAAAAAGGGACACAGACAATGTGGGTCTTTTTACACTCAGCTCCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAAAGGGACACAGACAATGTGGGTCTTTTTACACTCAGCTCCTCC  600

seq1  CTGAGAATAAAGAATCAGGTAATAAATGTACAAGGGCTCTGGACCAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAATAAAGAATCAGGTAATAAATGTACAAGGGCTCTGGACCAGAAA  650

seq1  ATTCACTGTTATAAAGAGAGAAATATAACTTTTGGTACTTAAATATGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACTGTTATAAAGAGAGAAATATAACTTTTGGTACTTAAATATGGGA  700

seq1  AATTTCACCTGCAGTTCTGAAATAGATGGGGAACATTAGCCACTGACTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCACCTGCAGTTCTGAAATAGATGGGGAACATTAGCCACTGACTCC  750

seq1  AAGTAGAGAGAGTGGTAATAATCACCTGCTATGAACGGGTATTAATTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGAGAGAGTGGTAATAATCACCTGCTATGAACGGGTATTAATTAAT  800

seq1  AGAAGACTGTGGATCCAGGTAGAAAGCATAACAGATAGATAGTATAATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACTGTGGATCCAGGTAGAAAGCATAACAGATAGATAGTATAATAT  850

seq1  GTATTAATTAAATAAATGTCTTTGGCTCAAGATAGAGAGCATAAAAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAATTAAATAAATGTCTTTGGCTCAAGATAGAGAGCATAAAAAATA  900

seq1  GATGTTATAACAGGTTGGCTGCACTAGGTGTGGAGAGCTTAACAATTAAA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GATGTTATAACAGGTTGGCTGCACTAGGTGTGGAGAGCTT-ACAATTAAA  949

seq1  AACTAGCTGTTTCCTATAGGCAGATATTAGTGAAGGTTTGAAATAATTGT  1000
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AACTAGCTGTTTCCTATAGGCAGATATTAGTGAA-GTTTGAAATAATTGT  998

seq1  TTTAAAATTGTATAAAGATATATTGCTCTAATAATTCTTACATG-ATATT  1049
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  TTTAAAATTGTATAAAGATATATTGCTCTAATAA-TCTTACATGAATATT  1047

seq1  TAAATTTTGTCTAAAATGGGCTCCATCGGAATTTTGGTTTTAAATCCTGT  1099
      |||| ||||||||||   ||||||||||  | ||||||||||||||||| 
seq2  TAAA-TTTGTCTAAA--TGGCTCCATCG--AATTTGGTTTTAAATCCTG-  1091

seq1  TTTTTAAAGTTGCC-TCTTATAAGCATGT  1127
       ||||||||| ||| |||| |||||||||
seq2  -TTTTAAAGTGGCCTTCTTTTAAGCATGT  1119

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information