BAC Information

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BAC

Clone NameB6Ng01-165E14
Chromosome4 (Build37)
Map Location 63,230,271 - 63,380,048
singlet/doubletdoublet
Overlap gene6330416G13Rik, LOC670833, 1700018C11Rik, LOC667451
Upstream geneRgs3, Zfp618, Ambp, Kif12, Col27a1, Orm1, Orm-ps, Orm3, Orm2, Akna, Whrn, Atp6v1g1
Downstream geneTnfsf15, Tnfsf8, Rpl17-ps, Tnc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165E14.bB6Ng01-165E14.g
ACCDH957385DH957386
length1,030919
definitionDH957385|Mus musculus domesticus DNA, BAC clone: B6Ng01-165E14, 5' end.DH957386|Mus musculus domesticus DNA, BAC clone: B6Ng01-165E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,379,018 - 63,380,048)(63,230,271 - 63,231,190)
sequence
gaattctcaaatcctaccctgaacaacatatctccaacaaagacgcacct
cctaatccttcccatacagttcatcaactgagtaccaagcattcaaatat
atgagcctgtgtgggccattctcattcaaaccaccacaatctcttaggtg
gaacacagagaaaatattttttttaactcccagctaattcgttctagttg
aattttccatgcaccgatacctgaggctatggagcaaggctatggaagta
gatagatgtatgatctctcctctgccgtgttccagctctgagactcagat
agctgaaccagtctgtctgcactttacctcctccatctacaaagcagtaa
gattagggtgatacccttgagaggcaaaaggaaacagtacacatgacagc
aactgatgatggttctgtcgagatccttggtccctgctcagtaagaacca
gctgtcacactttctgaacatgaccctgatggtctgtggtctccttctct
tttcttctgcacatactaaattacaaacagtatgaagccataaggccaca
gtggcatgtcaggctctgccaagtgccatgtgtgagacggataaggctaa
cagactcgccaaatatttgcactattgagttgaaatagagagtacaataa
gggaattactaaataattgccaagtgattgtgataaaggttataaaggaa
acaagaaaggctttggggatttaaaaacaaagacagggccttttatcaca
agcgactcagagtttgtatcccagacacttattgcacactttcaaagttt
aggtaacattgggtttgtgacctcacaatacgatcatcggctataacaag
tgtgactcactctaatttcagacctttgggggtcaaagaccaagaggcca
aaacactggccggctgccagctgtctcttgggcaaagcagtaagctgcac
cctgggcttgggcccgcatgctccttccatgcacttagacagtaagagtt
ttccttacagctgctgcagaaaggtccaaa
gaattctttccagagcgtcctgccgcttttgtgtttcatttgaaattggg
gtgaggagggcttaggagtgactgacctcgctatcaaacttgagggctca
caacttttaccccggctccggctcagccagccatcttcaataggccgact
aaaagaaccagttaagaatggaatgcagaaaagggagatttagtcaatgt
ggcctcactggaaagagcgacacagagactcagcaaacactccagaggtc
ctgaagggagagcagagtttaagcacacagacacggccaagcacatctaa
gcagccaggtcaagatgtggccccgcccaccattttcccaccatcctctg
ggctccagtctcatcctggatggtagcctaacaagtcattagagctgtgg
gacatttcccatcatgagattcctagcagagttcccatttcttgggagtc
cgtagtttcagcagcctgagagacacgagtgtctctttagaatatcctca
tttctgccaggccagttacaacctgttgtcaagattcacccaataagtat
tgaataggagccatcccaggatcagcatggtttcctccaggcccctggga
ggctgttttgacccccagggtggcagggatatctgacagggtgcccctga
gtggagctgctgttcctggcagctccatgccttctacagctctccttgtc
ttctacaggtgttctacgtgttggtgtgggccaacatctactccaccagc
caaatgtttgccctgggcaccagtgggcaggcgtgctgctttgctaccct
tggctgctttcagcccgaccctgacccttgtgctggtctttgaaaggcag
cagaggaatgtgaggtgtccggggccctgtccgtccctccttaaggctgg
tggtctgatctttctttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_63379018_63380048
seq2: B6Ng01-165E14.b_44_1073 (reverse)

seq1  TTTGGACCTTCTTGCAGCAGCTGTAAGAGAAACACTTACTGTCTAAGTGC  50
      ||||||||||  |||||||||||||||  |||| ||||||||||||||||
seq2  TTTGGACCTTTCTGCAGCAGCTGTAAGGAAAACTCTTACTGTCTAAGTGC  50

seq1  ATGGAATGGAGCATGCGGG-CCAAGCCCAGGGTGCAGCTTACTTGCTTTG  99
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  ATGGAA-GGAGCATGCGGGCCCAAGCCCAGGGTGCAGCTTAC-TGCTTTG  98

seq1  GCCCAGAGACAGCTGGCAGCCGGCCAGTGTTTTGGCCTCCTTGGTCTTTG  149
       || |||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCAAGAGACAGCTGGCAGCCGGCCAGTGTTTTGGCCT-CTTGGTCTTTG  147

seq1  ACCCCCAAAGGTCTGGAATTAGAGTGAGTCACACTTGTTATTAGCCGATG  199
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  ACCCCCAAAGGTCTGAAATTAGAGTGAGTCACACTTGTTA-TAGCCGATG  196

seq1  ATCGTATTGTGAGGTCACAAACCCAATGTTACCTAAACTTTG-AAGTGTG  248
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATCGTATTGTGAGGTCACAAACCCAATGTTACCTAAACTTTGAAAGTGTG  246

seq1  CAATAAGTGTCTGGGATACAAACTCTGAGTCGCTTGTGAT-AAAGGCCCT  297
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAATAAGTGTCTGGGATACAAACTCTGAGTCGCTTGTGATAAAAGGCCCT  296

seq1  GTCTTTGTTTTTAAATCCCCAAAGCCTTTCTTGTTTCCTTTATAACCTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGTTTTTAAATCCCCAAAGCCTTTCTTGTTTCCTTTATAACCTTT  346

seq1  ATCACAATCACTTGGCAATTATTTAGTAATTCCCTTATTGTACTCTCTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAATCACTTGGCAATTATTTAGTAATTCCCTTATTGTACTCTCTAT  396

seq1  TTCAACTCAATAGTGCAAATATTTGGCGAGTCTGTTAGCCTTATCCGTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTCAATAGTGCAAATATTTGGCGAGTCTGTTAGCCTTATCCGTCT  446

seq1  CACACATGGCACTTGGCAGAGCCTGACATGCCACTGTGGCCTTATGGCTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATGGCACTTGGCAGAGCCTGACATGCCACTGTGGCCTTATGGCTT  496

seq1  CATACTGTTTGTAATTTAGTATGTGCAGAAGAAAAGAGAAGGAGACCACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGTTTGTAATTTAGTATGTGCAGAAGAAAAGAGAAGGAGACCACA  546

seq1  GACCATCAGGGTCATGTTCAGAAAGTGTGACAGCTGGTTCTTACTGAGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATCAGGGTCATGTTCAGAAAGTGTGACAGCTGGTTCTTACTGAGCA  596

seq1  GGGACCAAGGATCTCGACAGAACCATCATCAGTTGCTGTCATGTGTACTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCAAGGATCTCGACAGAACCATCATCAGTTGCTGTCATGTGTACTG  646

seq1  TTTCCTTTTGCCTCTCAAGGGTATCACCCTAATCTTACTGCTTTGTAGAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTTGCCTCTCAAGGGTATCACCCTAATCTTACTGCTTTGTAGAT  696

seq1  GGAGGAGGTAAAGTGCAGACAGACTGGTTCAGCTATCTGAGTCTCAGAGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGGTAAAGTGCAGACAGACTGGTTCAGCTATCTGAGTCTCAGAGC  746

seq1  TGGAACACGGCAGAGGAGAGATCATACATCTATCTACTTCCATAGCCTTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACACGGCAGAGGAGAGATCATACATCTATCTACTTCCATAGCCTTG  796

seq1  CTCCATAGCCTCAGGTATCGGTGCATGGAAAATTCAACTAGAACGAATTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAGCCTCAGGTATCGGTGCATGGAAAATTCAACTAGAACGAATTA  846

seq1  GCTGGGAGTTAAAAAAAATATTTTCTCTGTGTTCCACCTAAGAGATTGTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAGTTAAAAAAAATATTTTCTCTGTGTTCCACCTAAGAGATTGTG  896

seq1  GTGGTTTGAATGAGAATGGCCCACACAGGCTCATATATTTGAATGCTTGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTGAATGAGAATGGCCCACACAGGCTCATATATTTGAATGCTTGG  946

seq1  TACTCAGTTGATGAACTGTATGGGAAGGATTAGGAGGTGCGTCTTTGTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGTTGATGAACTGTATGGGAAGGATTAGGAGGTGCGTCTTTGTTG  996

seq1  GAGATATGTTGTTCAGGGTAGGATTTGAGAATTC  1031
      ||||||||||||||||||||||||||||||||||
seq2  GAGATATGTTGTTCAGGGTAGGATTTGAGAATTC  1030

seq1: chr4_63230271_63231190
seq2: B6Ng01-165E14.g_70_988

seq1  GAATTCTTTCCAGAGCGTCCTGCCGCTTTTGTGTTTCATTTGAAATTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCAGAGCGTCCTGCCGCTTTTGTGTTTCATTTGAAATTGGG  50

seq1  GTGAGGAGGGCTTAGGAGTGACTGACCTCGCTATCAAACTTGAGGGCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAGGGCTTAGGAGTGACTGACCTCGCTATCAAACTTGAGGGCTCA  100

seq1  CAACTTTTACCCCGGCTCCGGCTCAGCCAGCCATCTTCAATAGGCCGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTTACCCCGGCTCCGGCTCAGCCAGCCATCTTCAATAGGCCGACT  150

seq1  AAAAGAACCAGTTAAGAATGGAATGCAGAAAAGGGAGATTTAGTCAATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACCAGTTAAGAATGGAATGCAGAAAAGGGAGATTTAGTCAATGT  200

seq1  GGCCTCACTGGAAAGAGCGACACAGAGACTCAGCAAACACTCCAGAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCACTGGAAAGAGCGACACAGAGACTCAGCAAACACTCCAGAGGTC  250

seq1  CTGAAGGGAGAGCAGAGTTTAAGCACACAGACACGGCCAAGCACATCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGGAGAGCAGAGTTTAAGCACACAGACACGGCCAAGCACATCTAA  300

seq1  GCAGCCAGGTCAAGATGTGGCCCCGCCCACCATTTTCCCACCATCCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCAGGTCAAGATGTGGCCCCGCCCACCATTTTCCCACCATCCTCTG  350

seq1  GGCTCCAGTCTCATCCTGGATGGTAGCCTAACAAGTCATTAGAGCTGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGTCTCATCCTGGATGGTAGCCTAACAAGTCATTAGAGCTGTGG  400

seq1  GACATTTCCCATCATGAGATTCCTAGCAGAGTTCCCATTTCTTGGGAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTCCCATCATGAGATTCCTAGCAGAGTTCCCATTTCTTGGGAGTC  450

seq1  CGTAGTTTCAGCAGCCTGAGAGACACGAGTGTCTCTTTAGAATATCCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGTTTCAGCAGCCTGAGAGACACGAGTGTCTCTTTAGAATATCCTCA  500

seq1  TTTCTGCCAGGCCAGTTACAACCTGTTGTCAAGATTCACCCAATAAGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCAGGCCAGTTACAACCTGTTGTCAAGATTCACCCAATAAGTAT  550

seq1  TGAATAGGAGCCATCCCAGGATCAGCATGGTTTCCTCCAGGCCCCTGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGGAGCCATCCCAGGATCAGCATGGTTTCCTCCAGGCCCCTGGGA  600

seq1  GGCTG-TTTGACCCCCAGGGTGGCAGGGATATCTGACAGGGTGCCCCTGA  649
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTTTTGACCCCCAGGGTGGCAGGGATATCTGACAGGGTGCCCCTGA  650

seq1  GTGGAGCTGCTGTTCCTGGCAGCTCCATGCCTTCTACAGCTCTCCTTGTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGCTGCTGTTCCTGGCAGCTCCATGCCTTCTACAGCTCTCCTTGTC  700

seq1  TTCTACAGGTGTTCTACGTGTTGGTGTGGGCCAACATCTACTCCACCAGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAGGTGTTCTACGTGTTGGTGTGGGCCAACATCTACTCCACCAGC  750

seq1  CAAATGTTTGCCCTGGGCAACCAGTGGGCAGGCGTGCTGC-TTGCGACCC  798
      |||||||||||||||||| ||||||||||||||||||||| |||| ||||
seq2  CAAATGTTTGCCCTGGGC-ACCAGTGGGCAGGCGTGCTGCTTTGCTACCC  799

seq1  -TGGCTGCTTTCAGCCTGACCCTGACCCTTGTGCTGGTCTTTGAGAGGCA  847
       ||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  TTGGCTGCTTTCAGCCCGACCCTGACCCTTGTGCTGGTCTTTGAAAGGCA  849

seq1  GCAGAGGAAGGTGAGGTGTCCGGGGCCCTGTCTGTCCCCTCCTTAGGGCT  897
      ||||||||| |||||||||||||||||||||| || ||||||||| ||||
seq2  GCAGAGGAATGTGAGGTGTCCGGGGCCCTGTCCGT-CCCTCCTTAAGGCT  898

seq1  GGGTGGTCTGATACTTTCTTTGT  920
       ||||||||||| ||||||||||
seq2  -GGTGGTCTGAT-CTTTCTTTGT  919