BAC Information

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BAC

Clone NameB6Ng01-165E24
Chromosome4 (Build37)
Map Location 15,881,775 - 16,010,059
singlet/doubletdoublet
Overlap geneNbn, Osgin2
Upstream geneEfcbp1, Tmem64, LOC100040095, LOC633695, Calb1, Decr1
Downstream geneRipk2, LOC667150, LOC383994, LOC100040154, LOC667212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165E24.bB6Ng01-165E24.g
ACCDH957405DH957406
length1,1481,166
definitionDH957405|Mus musculus domesticus DNA, BAC clone: B6Ng01-165E24, 5' end.DH957406|Mus musculus domesticus DNA, BAC clone: B6Ng01-165E24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,881,775 - 15,882,927)(16,008,893 - 16,010,059)
sequence
gaattcactgtgtagaccagctagcctcgaactcacagagatctgcttgc
ctctgtatcctgagtgctgggattaaagaagtgtaccagcacacccagct
gggaatatagtttcttagtggccttttagatgtagctgaagatcatatac
atgatacagtcatgccataatcaccctaagacacttcagaggtgcaaccc
ttttctcagaaacccacagccatgcttttggatatgtcctaacctttccc
tgagtacttctatgttaactcctacatttaaatctgtttaaacatttctc
tcaaacaaactccaattctgctttatgaaattcttctctgcagtggagtt
aaggatccagctttgtctggatggcagaacctaaaggataaggcagtcca
caggctgctgacaccagatctgggctgcttcattctgttcctctgctgac
agggtaactgattaaaactctgtgatttcgaagagttgaaatgttataaa
tccaaagtcaaattatcttaggctacctttaatgcccttaatagccattt
agtgcacctacttctgtgtctgactcaacagctttgtaccagttaaatcc
ttttaacatgtattaacagacaactagcttccagcaacaaaagggctaag
atgtattgctccgacctgcagggataatcagagggcaatccatggcaaag
ggagtgagagagtgggagggaaagagacaggaagaatgagagaaagtcaa
tcatactgattaagctctgaaaaactttattcaggagtggcaatataagc
ataagcaagaggaggctccaagggaggggagaagagcccgggggctccct
ggaggtcaggtggccatcttctgctcctggaaccaacagtcacagagtcc
tctttacccacaaacattcttactgttagaaccatgactggtctctcaga
ttgtttatgtaagctagaaactttccacaaagccaggctcctggcaatgt
atataccccctctcttctctcttgctgtacctgcttacctggaaatttca
cccaagaaattgatttagggctttctctgttctgtaacaataaaaagctc
aagaaacttatgtccgtgtgtgggaccgggtactttagaacaacctgt
gaattccctattgttagtgatggtgatacagtatttaataggaggaaaaa
ttgagttgcaaaatgtttctcttaattatagttgtttattacatctaaaa
tgcttcttttttattaagatctctaatggaaagttccaagactcaaaaga
taaaataatatgtttagaaggaactaaagtcccattgatagctgagaaaa
gacaaggtcatatagttattttcattattaaagtaaagagctctgaaagg
attacccacatcagccacaaacagctctcaataacctgctgaggttcaga
ccacggacaaacagctgagatgcacattttgcataccaaagcagacttgg
tctccaggttccaccagcatcccacagtctctacatgttacagggctact
gcaccctctcccatgaacactcaaacccatgggctgggcttcccctttcc
cagaagctctttaatatattatctagacattttggtgtctccccccttcc
cttcctctctacctccctcccttcctcttttcatccctccctccctccct
ccctctcttgctctctcactcttgctcttgttctcactctcgctctctgc
attttctctctctcctggagtatgctctttttctctttcacttccccatt
ccctttgtcgcctctccgcagtgacttctctggcctctttccttggaagg
gaccagtaagccagctcaagagtacttttatatactttaatctggattga
attgtctcatttcaccagcagagaaatagctttactataacctacaatag
ataacaaagaatgggagaagtacaagagaaatgaacactgggctgttctc
atgaaagaacagggaaggaatcctcttctaagagccattctctgggtgag
gttcctgagagccaccgtagagctcactgataattgccttaatgttgcct
gagttagtacattgcatttacccttcttcctaatcctatagatatggcag
aggggcaaatttataaaaattaacctagtacattttagaaatttagaggg
ctttggaaaaacttgatatctcatggctatagtgatgctgtacataatgg
tctaaatgtcccaggtcctacctataagagactcttgaaggccaaaaata
ttttccccacacagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_15881775_15882927
seq2: B6Ng01-165E24.b_43_1190

seq1  GAATTCACTGTGTAGACCAGCTAGCCTCGAACTCACAGAGATCTGCTTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTGTAGACCAGCTAGCCTCGAACTCACAGAGATCTGCTTGC  50

seq1  CTCTGTATCCTGAGTGCTGGGATTAAAGAAGTGTACCAGCACACCCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTATCCTGAGTGCTGGGATTAAAGAAGTGTACCAGCACACCCAGCT  100

seq1  GGGAATATAGTTTCTTAGTGGCCTTTTAGATGTAGCTGAAGATCATATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATATAGTTTCTTAGTGGCCTTTTAGATGTAGCTGAAGATCATATAC  150

seq1  ATGATACAGTCATGCCATAATCACCCTAAGACACTTCAGAGGTGCAACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACAGTCATGCCATAATCACCCTAAGACACTTCAGAGGTGCAACCC  200

seq1  TTTTCTCAGAAACCCACAGCCATGCTTTTGGATATGTCCTAACCTTTCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAGAAACCCACAGCCATGCTTTTGGATATGTCCTAACCTTTCCC  250

seq1  TGAGTACTTCTATGTTAACTCCTACATTTAAATCTGTTTAAACATTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACTTCTATGTTAACTCCTACATTTAAATCTGTTTAAACATTTCTC  300

seq1  TCAAACAAACTCCAATTCTGCTTTATGAAATTCTTCTCTGCAGTGGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAAACTCCAATTCTGCTTTATGAAATTCTTCTCTGCAGTGGAGTT  350

seq1  AAGGATCCAGCTTTGTCTGGATGGCAGAACCTAAAGGATAAGGCAGTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCCAGCTTTGTCTGGATGGCAGAACCTAAAGGATAAGGCAGTCCA  400

seq1  CAGGCTGCTGACACCAGATCTGGGCTGCTTCATTCTGTTCCTCTGCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGCTGACACCAGATCTGGGCTGCTTCATTCTGTTCCTCTGCTGAC  450

seq1  AGGGTAACTGATTAAAACTCTGTGATTTCGAAGAGTTGAAATGTTATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTAACTGATTAAAACTCTGTGATTTCGAAGAGTTGAAATGTTATAAA  500

seq1  TCCAAAGTCAAATTATCTTAGGCTACCTTTAATGCCCTTAATAGCCATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGTCAAATTATCTTAGGCTACCTTTAATGCCCTTAATAGCCATTT  550

seq1  AGTGCACCTACTTCTGTGTCTGACTCAACAGCTTTGTACCAGTTAAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCACCTACTTCTGTGTCTGACTCAACAGCTTTGTACCAGTTAAATCC  600

seq1  TTTTAACATGTATTAACAGACAACTAGCTTCCAGCAACAAAAGGGCTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACATGTATTAACAGACAACTAGCTTCCAGCAACAAAAGGGCTAAG  650

seq1  ATGTATTGCTCCGACCTGCAGGGATAATCAGAGGGCAATCCATGGCAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTGCTCCGACCTGCAGGGATAATCAGAGGGCAATCCATGGCAAAG  700

seq1  GGAGTGAGAGAGTGGGAGGGAAAGAGACAGGAAGAATGAGAGAAAGTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGAGAGAGTGGGAGGGAAAGAGACAGGAAGAATGAGAGAAAGTCAA  750

seq1  TCATACTGATTAAGCTCTGAAAAACTTTATTCAGGAGTGGCAATATAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTGATTAAGCTCTGAAAAACTTTATTCAGGAGTGGCAATATAAGC  800

seq1  ATAAGCAAGAGGAGGCTCCAAGGGAGGGGAGAAGAGCCCGGGGGCTCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAAGAGGAGGCTCCAAGGGAGGGGAGAAGAGCCCGGGGGCTCCCT  850

seq1  GGAGGTCAGGTGGCCATCTTCTGCTCCTGGAACCAACAGTCACAGAGTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCAGGTGGCCATCTTCTGCTCCTGGAACCAACAGTCACAGAGTCC  900

seq1  TCTTTACCCACAAACATTCTTACTGTTAGAACCATGACTGGTCTCTCAGG  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCTTTACCCACAAACATTCTTACTGTTAGAACCATGACTGGTCTCTCA-G  949

seq1  ATTGTTTATGTAAGCTAGAAACTTTCCACAAAGCCAAGGCTCCTGGCAAT  1000
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATTGTTTATGTAAGCTAGAAACTTTCCACAAAGCC-AGGCTCCTGGCAAT  998

seq1  GTATTATACCCCCCTCTCTCTCTCCTTTGCTGTAACCTGCTTACCTGGAA  1050
      ||| |||| |||||||||| ||||  ||||||| ||||||||||||||||
seq2  GTA-TATA-CCCCCTCTCT-TCTCTCTTGCTGT-ACCTGCTTACCTGGAA  1044

seq1  TTTTCACCAAGGAATATTGATTTAGGGCTTTCTTCTGTTCTGTAACTATA  1100
       ||||||| | ||| ||||||||||||||||| ||||||||||||| |||
seq2  ATTTCACCCAAGAA-ATTGATTTAGGGCTTTC-TCTGTTCTGTAACAATA  1092

seq1  AAAGCTTCAGGAAAC-TATGTCCGTGTG-GGAACGGGGTAC-TTAGAACA  1147
      |||   ||| ||||| |||||||||||| || || |||||| ||||||||
seq2  AAAAGCTCAAGAAACTTATGTCCGTGTGTGGGACCGGGTACTTTAGAACA  1142

seq1  ACCTGT  1153
      ||||||
seq2  ACCTGT  1148

seq1: chr4_16008893_16010059
seq2: B6Ng01-165E24.g_67_1232 (reverse)

seq1  TTC--TGTTGGGAAAATATTTT--GCTTTCAA-AGT-TCTTTATGGTATG  44
      |||  ||| |||||||||||||  || ||||| ||| ||||   |||| |
seq2  TTCTGTGTGGGGAAAATATTTTTGGCCTTCAAGAGTCTCTTATAGGTA-G  49

seq1  GACTTGGGGACATTTAG-CCATTATGTACCAGCATCACTATAGCCCATGA  93
      ||| | ||||||||||| |||||||||| |||||||||||||| ||||||
seq2  GACCT-GGGACATTTAGACCATTATGTA-CAGCATCACTATAG-CCATGA  96

seq1  AGTACTCAAGTTTTTCCAAAAGCCCCTCTAAATTTTCTAAAATGTACTAG  143
        || |||||||||||||||   ||||||||| |||||||||||||||||
seq2  GATA-TCAAGTTTTTCCAAA--GCCCTCTAAA-TTTCTAAAATGTACTAG  142

seq1  GTTTATTTTTATTAAATTTGCCTCCTCTGCCATATCTATAGGATTTAGGA  193
      ||| ||||||| |||||||||| |||||||||||||||||||| ||||||
seq2  GTTAATTTTTA-TAAATTTGCC-CCTCTGCCATATCTATAGGA-TTAGGA  189

seq1  AGAAGGGTAAATGC-ATGTACTAACTCAGGCAACATTAAGGCAATTATCA  242
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGAAGGGTAAATGCAATGTACTAACTCAGGCAACATTAAGGCAATTATCA  239

seq1  GTGAGCTCTACGGTGGCTCTCAGGAACCTCACCCAGAGAATGGCTCTTAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTCTACGGTGGCTCTCAGGAACCTCACCCAGAGAATGGCTCTTAG  289

seq1  AAGAGGATTCCTTCCCTGTTCTTTCATGAGAACAG-CCAGTGTTCATTTC  341
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAGAGGATTCCTTCCCTGTTCTTTCATGAGAACAGCCCAGTGTTCATTTC  339

seq1  TCTTGTACTTCTCCCATTCTTTGTTATCTATTGTAGGTTATAGT-AAGCT  390
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTTGTACTTCTCCCATTCTTTGTTATCTATTGTAGGTTATAGTAAAGCT  389

seq1  ATTTCTCTGCTGGTGAAATGAGACAATTCAATCCAGATTAAAGTATATAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTGCTGGTGAAATGAGACAATTCAATCCAGATTAAAGTATATAA  439

seq1  AAGTACTCTTGAGCTGGCTTACTGGTCCCTTCCAAGGAAAGAGGCCAGAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACTCTTGAGCTGGCTTACTGGTCCCTTCCAAGGAAAGAGGCCAGAG  489

seq1  AAGTCACTGCGGAGAGGCGACAAAGGGAATGGGGAAGTGAAAGAGAAAAA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACTGCGGAGAGGCGACAAAGGGAATGGGGAAGTGAAAGAGAAAAA  539

seq1  GAGCATACTCCAGGAGAGAGAGAAAATGCAGAGAGCGAGAGTGAGAACAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATACTCCAGGAGAGAGAGAAAATGCAGAGAGCGAGAGTGAGAACAA  589

seq1  GAGCAAGAGTGAGAGAGCAAGAGAGGGAGGGAGGGAGGGAGGGATGAAAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGAGTGAGAGAGCAAGAGAGGGAGGGAGGGAGGGAGGGATGAAAA  639

seq1  GAGGAAGGGAGGGAGGTAGAGAGGAAGGGAAGGGGGGAGACACCAAAATG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGGAGGGAGGTAGAGAGGAAGGGAAGGGGGGAGACACCAAAATG  689

seq1  TCTAGATAATATATTAAAGAGCTTCTGGGAAAGGGGAAGCCCAGCCCATG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATAATATATTAAAGAGCTTCTGGGAAAGGGGAAGCCCAGCCCATG  739

seq1  GGTTTGAGTGTTCATGGGAGAGGGTGCAGTAGCCCTGTAACATGTAGAGA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGAGTGTTCATGGGAGAGGGTGCAGTAGCCCTGTAACATGTAGAGA  789

seq1  CTGTGGGATGCTGGTGGAACCTGGAGACCAAGTCTGCTTTGGTATGCAAA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGATGCTGGTGGAACCTGGAGACCAAGTCTGCTTTGGTATGCAAA  839

seq1  ATGTGCATCTCAGCTGTTTGTCCGTGGTCTGAACCTCAGCAGGTTATTGA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCATCTCAGCTGTTTGTCCGTGGTCTGAACCTCAGCAGGTTATTGA  889

seq1  GAGCTGTTTGTGGCTGATGTGGGTAATCCTTTCAGAGCTCTTTACTTTAA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTTTGTGGCTGATGTGGGTAATCCTTTCAGAGCTCTTTACTTTAA  939

seq1  TAATGAAAATAACTATATGACCTTGTCTTTTCTCAGCTATCAATGGGACT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAAAATAACTATATGACCTTGTCTTTTCTCAGCTATCAATGGGACT  989

seq1  TTAGTTCCTTCTAAACATATTATTTTATCTTTTGAGTCTTGGAACTTTCC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCCTTCTAAACATATTATTTTATCTTTTGAGTCTTGGAACTTTCC  1039

seq1  ATTAGAGATCTTAATAAAAAAGAAGCATTTTAGATGTAATAAACAACTAT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGATCTTAATAAAAAAGAAGCATTTTAGATGTAATAAACAACTAT  1089

seq1  AATTAAGAGAAACATTTTGCAACTCAATTTTTCCTCCTATTAAATACTGT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAGAAACATTTTGCAACTCAATTTTTCCTCCTATTAAATACTGT  1139

seq1  ATCACCATCACTAACAATAGGGAATTC  1167
      |||||||||||||||||||||||||||
seq2  ATCACCATCACTAACAATAGGGAATTC  1166