BAC Information

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BAC

Clone NameB6Ng01-165M19
Chromosome4 (Build37)
Map Location 25,343,810 - 25,344,821
singlet/doubletsinglet
Overlap genenone
Upstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019
Downstream geneLOC625732, Fut9, LOC100040780, Hn1-ps1, Manea, Bhmt-ps1, LOC665079
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-165M19.bB6Ng01-165M19.g
ACCDH957762DH957763
length7581,019
definitionDH957762|Mus musculus domesticus DNA, BAC clone: B6Ng01-165M19, 5' end.DH957763|Mus musculus domesticus DNA, BAC clone: B6Ng01-165M19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaccaggagcctggagcataaaccacacaggaccactgattac
tggctactctggtgctctcatgaagctatttgtttctgtatagcccagat
ctacctaccagggactggtaccacccacagcagacagagccttcccacat
caatttgcaattaagaaaatattcctctctaactcaattgtcatcagaga
ggcttcagcctgcaatggatgaaaacaaatgcagaaacccaaagtcaaac
atgtgacagagcttggagaatcctgtggaagaggggcaggaggattgtag
gagcctgacggtccatagacaccacaagaaaacccagagtcatctaactt
gagctcatgggatcttgcagagatgggaccaccgaccaggaagcctgcat
gggtctgacttaggccctccacacatgttatagttctgtagctagatctt
cttgtaggagtactaacagtggaaaggggagctgtctctgactctcttga
ctgctgttgagacccttgcccctactgggctgccttgtctagccttaata
gaagaggaggtgcttactcttactgcaacttgatgtgccttgaatgttat
ccctctaggttggcccttttctgaaaagggggagagggacttggaggtga
ggagggaggggaaactgtggttcagatgtaaaaataaaattaaaattaaa
taaaaagaaaaaaatttgtctctttggatattactattagcagagctggt
atgggata

gaattcctctttcctttcggatgtcattagttctgtgctattcaacaaat
ataaaacaaatctctttgttagtgacagtcaaacatcagaagacagcatt
caagctggcagagacacatatagcaggcagacaacagatgggccagaccc
tacagacttcagacagaccgaagatacattggtagatggagagaatacaa
attggtgtgcactcttggccaagtgattataagtagaagtgctttggttt
tattccttgatttgacaaatgtactttttagtgcttctgaagttatcttt
aatatattaaccaacacaatgaatatcgaaaaaactaaaaagaatgaaag
gctttaagttcccataattaaaattacactgtcatgttaaatttttaaaa
acctgaggcagtttactggctaaagtatagttttgatcttattttctatt
ttagtttagtttagtttagcttttgttttgttttgttttgttttgttttg
ttttgttttgttttgttttgttttgttttgagacagggtttctctgtata
gctctggatgtcctggaactcactgtgtaggccaggctggcctcaaactc
agaaatctgcctgcctctgcctcccaagtgctgggattaaagatatgtgc
cttcttttaggtttttatgattatgtagacatatacttccttctgaaatc
attccttcaatgtttagaaaatttgtagggaaatttgtagagagggcaac
aaaataatatatgcagccactgaaagtctgaattgatggcattcctacat
cacctacttagtgagactctgaatagatcccaaagaatctctattgaaat
aatatctaagtgatcctcacacacatgattatctccagaaaatataactt
tctttcttttttttttttttaaattttttttattattataagataaggta
cactgttactgtcttcagaacaaccagaagaagggcatcagaatctcatt
atgggttggttgtggagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_25343810_25344821
seq2: B6Ng01-165M19.g_67_1085

seq1  GAATTCCTCTTTCCTTTCGGATGTCATTAGTTCTGTGCTATTCAACAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTCCTTTCGGATGTCATTAGTTCTGTGCTATTCAACAAAT  50

seq1  ATAAAACAAATCTCTTTGTTAGTGACAGTCAAACATCAGAAGACAGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACAAATCTCTTTGTTAGTGACAGTCAAACATCAGAAGACAGCATT  100

seq1  CAAGCTGGCAGAGACACATATAGCAGGCAGACAACAGATGGGCCAGACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGGCAGAGACACATATAGCAGGCAGACAACAGATGGGCCAGACCC  150

seq1  TACAGACTTCAGACAGACCGAAGATACATTGGTAGATGGAGAGAATACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACTTCAGACAGACCGAAGATACATTGGTAGATGGAGAGAATACAA  200

seq1  ATTGGTGTGCACTCTTGGCCAAGTGATTATAAGTAGAAGTGCTTTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGTGCACTCTTGGCCAAGTGATTATAAGTAGAAGTGCTTTGGTTT  250

seq1  TATTCCTTGATTTGACAAATGTACTTTTTAGTGCTTCTGAAGTTATCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTTGATTTGACAAATGTACTTTTTAGTGCTTCTGAAGTTATCTTT  300

seq1  AATATATTAACCAACACAATGAATATCGAAAAAACTAAAAAGAATGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTAACCAACACAATGAATATCGAAAAAACTAAAAAGAATGAAAG  350

seq1  GCTTTAAGTTCCCATAATTAAAATTACACTGTCATGTTAAATTTTTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAAGTTCCCATAATTAAAATTACACTGTCATGTTAAATTTTTAAAA  400

seq1  ACCTGAGGCAGTTTACTGGCTAAAGTATAGTTTTGATCTTATTTTCTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAGGCAGTTTACTGGCTAAAGTATAGTTTTGATCTTATTTTCTATT  450

seq1  TTAGTTTAGTTTAGTTTAGCTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTAGTTTAGTTTAGCTTTTGTTTTGTTTTGTTTTGTTTTGTTTTG  500

seq1  TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGAGACAGGGTTTCTCTGTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGAGACAGGGTTTCTCTGTATA  550

seq1  GCTCTGGATGTCCTGGAACTCACTGTGTAGGCCAGGCTGGCCTCAAACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGATGTCCTGGAACTCACTGTGTAGGCCAGGCTGGCCTCAAACTC  600

seq1  AGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGATATGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGATATGTGC  650

seq1  CTTCTTTTAGGTTTTTATGATTATGTAGACATATACTTCCTTCTGAAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTAGGTTTTTATGATTATGTAGACATATACTTCCTTCTGAAATC  700

seq1  ATTCCTTCAATGTTTAGAAAATTTGTAGGGAAATTTGTAGAGAGGGCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTCAATGTTTAGAAAATTTGTAGGGAAATTTGTAGAGAGGGCAAC  750

seq1  AAAATAATATATGCAGCCACTGAAAGTCTGAATTGATGGCATTCCTACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATATATGCAGCCACTGAAAGTCTGAATTGATGGCATTCCTACAT  800

seq1  CACCTACTTAGTGAGACTCTGAATAGATCCCAAAGAATCTCTATTGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTACTTAGTGAGACTCTGAATAGATCCCAAAGAATCTCTATTGAAAT  850

seq1  AATATCTAAGTGATCCTCACACACATGATTATCTCCAGAAAAATATAACT  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATATCTAAGTGATCCTCACACACATGATTATCTCCAG-AAAATATAACT  899

seq1  TTCTTTCTTTTTTTTTTTTT--AGATTTATTTATTATTAT-AGATAA-GT  946
      ||||||||||||||||||||  |  ||| ||||||||||| |||||| ||
seq2  TTCTTTCTTTTTTTTTTTTTTAAATTTTTTTTATTATTATAAGATAAGGT  949

seq1  ACACTGTTACTGTCTTCAGACACACCAGAAG-AGGGCATCAG-ATCTCAT  994
      ||||||||||||||||||||   |||||||| |||||||||| |||||||
seq2  ACACTGTTACTGTCTTCAGAACAACCAGAAGAAGGGCATCAGAATCTCAT  999

seq1  TATGGG-TGGTTGT-GAGCC  1012
      |||||| ||||||| |||||
seq2  TATGGGTTGGTTGTGGAGCC  1019


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