BAC Information

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BAC

Clone NameB6Ng01-166B06
Chromosome4 (Build37)
Map Location 151,687,367 - 151,795,696
singlet/doubletdoublet
Overlap geneRnf207, Rpl22, Chd5, Kcnab2
Upstream geneCamta1, LOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt
Downstream geneLOC100042028, Nphp4, LOC667039, Gm833, LOC100042089, Ajap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166B06.bB6Ng01-166B06.g
ACCDH957957DH957958
length1,167594
definitionDH957957|Mus musculus domesticus DNA, BAC clone: B6Ng01-166B06, 5' end.DH957958|Mus musculus domesticus DNA, BAC clone: B6Ng01-166B06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,794,572 - 151,795,696)(151,687,367 - 151,687,960)
sequence
gaattcaatcccccaaacccacataacagtggacagaaaaaacagatgcc
ataaaagctgtcctctgacctctacacatacacctacctccatgcccaca
ggcagtaataatgagactataaaatcaggacttggcatattttcatcagc
accccctctcaccaagaaattgctgtattccttgtcccttcctactcccc
tcccaccctggcaaccgtcagtccaccgtgtgggttttccctagttttag
cctctcgtggaaacgaatgacgaggtgtggccttttacaatctgcttctt
tcgcttggcagctcgggggtttgttcatccatgtcgtagcacgtctctga
atttcttttgatggctgaaggatattctgttgtgtgatggactgcgtgta
ggtcagccgtttttgagttcatgggcattccagttgttcccatcctttga
cgacggtgagaagtgttaccgtggacattgatgttctcaatttcctgggc
tcatatgacttgcgttctctgtgaacatactgaggagtgggttccctgct
tctgccatgactgactctcctggcttcccccaccccctgccgtttatggc
acactgtgtggttaagagcgactatggcggagccctgaggccccagccct
tgtgagatgccatggtttgccagcacagagaaatgcataaagaaaggagc
tgggctcctgctagatcagatgtgtagctcaaagctctcacttaaatata
cctgtggctggagaggcgggccagaggttggaagtgcactcgactcacgc
aaatgacccaaatatgatttccagtacccatgtcaggtggttcacaacca
cctgaaacttcaactctaggtatgccatgttttctctggcctctctggat
agccacacacacacacacacacacacacacacacacacacacacacacac
atacacacacacacatgcacacgagaacgcgcagatgcacacacatgcac
gctcgtgtgccaccccaacatgtacgcatgcatacccacatacagaccac
ccatgtaaccataaaaataaaaataagttgtttaaaaaggtcttcagccg
tgagtggtgtacaacacctttaatccagccacttgggaggcagaggccag
tgatttctgagttcaag
gaattctgcgcggtggtcgctggcgatctggaccggggattgagtcatga
gcggctcttctaacccggtgtctcccgtcccaatccccgaccgggcgcct
gcgcaccttgctgctctgagccggtcttaggcgatgcggccgcgtgacga
tgccttgaagtctctccatcagctcctgtcacagggaaagagctcagaac
gagggggtgtggcaaggaggtggcagccagggtgggagagagaagtggag
gacttgaaggcactggagctagtctagcggacgtttgacctcgtctccct
tagaagtgccaaccctcctctaggactgtccagaaccaggcacgcccaca
tctgtaggaggggaggtggagcgcccgcagacagacgctgcagtttggcg
aaacagaggcttatgaggcttattatgctcactgcccttttaaaagggat
tcacctggtctgaaaaaggctcatagtgaaagggaagagaagcccagaga
tcccaagttagcctgcgggcgaaatgagacacgcagcctctatgcagggc
agactctacagtgaggaaaggggcgggtgtgtgtgtgtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_151794572_151795696
seq2: B6Ng01-166B06.b_90_1212 (reverse)

seq1  CTTGAACTCAGAAATTCACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAA  50
      |||||||||||||| ||||  ||||||||||||||||||   ||||||||
seq2  CTTGAACTCAGAAA-TCACTGGCCTCTGCCTCCCAAGTGGCTGGATTAAA  49

seq1  GGTG-TGTACCACCACTCACGGCTGGAGACTTTTTTAAACAACTTATTTT  99
      |||| |||| ||||||||||||||| |||| |||||||||||||||||||
seq2  GGTGTTGTA-CACCACTCACGGCTGAAGACCTTTTTAAACAACTTATTTT  98

seq1  TATTTTTAATGTGTACATGTGT-GTCTGTATGTGGGTATGCATGCGTACA  148
      ||||||| |||  |||||| || |||||||||||||||||||||||||||
seq2  TATTTTT-ATGGTTACATGGGTGGTCTGTATGTGGGTATGCATGCGTACA  147

seq1  TGTTTGTGTGTGCACACGAGCGTGCATGTGTGTGCATCTGCGCGTTCTCG  198
      |||| | ||| |||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGGGTG-GCACACGAGCGTGCATGTGTGTGCATCTGCGCGTTCTCG  196

seq1  TGTGCATGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  246

seq1  TGTGTGTGTGTGTGTGTGGCTATCCAGAGAGGCCAGAGAAAACATGGCAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGGCTATCCAGAGAGGCCAGAGAAAACATGGCAT  296

seq1  ACCTAGAGTTGAAGTTTCAGGTGGTTGTGAACCACCTGACATGGGTACTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGAGTTGAAGTTTCAGGTGGTTGTGAACCACCTGACATGGGTACTG  346

seq1  GAAATCATATTTGGGTCATTTGCGTGAGTCGAGTGCACTTCCAACCTCTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATATTTGGGTCATTTGCGTGAGTCGAGTGCACTTCCAACCTCTG  396

seq1  GCCCGCCTCTCCAGCCACAGGTATATTTAAGTGAGAGCTTTGAGCTACAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCGCCTCTCCAGCCACAGGTATATTTAAGTGAGAGCTTTGAGCTACAC  446

seq1  ATCTGATCTAGCAGGAGCCCAGCTCCTTTCTTTATGCATTTCTCTGTGCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATCTAGCAGGAGCCCAGCTCCTTTCTTTATGCATTTCTCTGTGCT  496

seq1  GGCAAACCATGGCATCTCACAAGGGCTGGGGCCTCAGGGCTCCGCCATAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAACCATGGCATCTCACAAGGGCTGGGGCCTCAGGGCTCCGCCATAG  546

seq1  TCGCTCTTAACCACACAGTGTGCCATAAACGGCAGGGGGTGGGGGAAGCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTCTTAACCACACAGTGTGCCATAAACGGCAGGGGGTGGGGGAAGCC  596

seq1  AGGAGAGTCAGTCATGGCAGAAGCAGGGAACCCACTCCTCAGTATGTTCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGTCAGTCATGGCAGAAGCAGGGAACCCACTCCTCAGTATGTTCA  646

seq1  CAGAGAACGCAAGTCATATGAGCCCAGGAAATTGAGAACATCAATGTCCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAACGCAAGTCATATGAGCCCAGGAAATTGAGAACATCAATGTCCA  696

seq1  CGGTAACACTTCTCACCGTCGTCAAAGGATGGGAACAACTGGAATGCCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTAACACTTCTCACCGTCGTCAAAGGATGGGAACAACTGGAATGCCCA  746

seq1  TGAACTCAAAAACGGCTGACCTACACGCAGTCCATCACACAACAGAATAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAAAAACGGCTGACCTACACGCAGTCCATCACACAACAGAATAT  796

seq1  CCTTCAGCCATCAAAAGAAATTCAGAGACGTGCTACGACATGGATGAACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGCCATCAAAAGAAATTCAGAGACGTGCTACGACATGGATGAACA  846

seq1  AACCCCCGAGCTGCCAAGCGAAAGAAGCAGATTGTAAAAGGCCACACCTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCGAGCTGCCAAGCGAAAGAAGCAGATTGTAAAAGGCCACACCTC  896

seq1  GTCATTCGTTTCCACGAGAGGCTAAAACTAGGGAAAACCCACACGGTGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTCGTTTCCACGAGAGGCTAAAACTAGGGAAAACCCACACGGTGGA  946

seq1  CTGACGGTTGCCAGGGTGGGAGGGGAGTAGGAAGGGACAAGGAATACAGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGGTTGCCAGGGTGGGAGGGGAGTAGGAAGGGACAAGGAATACAGC  996

seq1  AATTTCTTGGTGAGAGGGGGTGCTGATGAAAATATGCCAAGTCCTGATTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTGGTGAGAGGGGGTGCTGATGAAAATATGCCAAGTCCTGATTT  1046

seq1  TATAGTCTCATTATTACTGCCTGTGGGCATGGAGGTAGGTGTATGTGTAG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCTCATTATTACTGCCTGTGGGCATGGAGGTAGGTGTATGTGTAG  1096

seq1  AGGTCAGAGGACAGCTTTTATGGCATC  1125
      |||||||||||||||||||||||||||
seq2  AGGTCAGAGGACAGCTTTTATGGCATC  1123

seq1: chr4_151687367_151687960
seq2: B6Ng01-166B06.g_68_661

seq1  GAATTCTGCGCGGTGGTCGCTGGCGATCTGGACCGGGGATTGAGTCATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCGCGGTGGTCGCTGGCGATCTGGACCGGGGATTGAGTCATGA  50

seq1  GCGGCTCTTCTAACCCGGTGTCTCCCGTCCCAATCCCCGACCGGGCGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTCTTCTAACCCGGTGTCTCCCGTCCCAATCCCCGACCGGGCGCCT  100

seq1  GCGCACCTTGCTGCTCTGAGCCGGTCTTAGGCGATGCGGCCGCGTGACGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCACCTTGCTGCTCTGAGCCGGTCTTAGGCGATGCGGCCGCGTGACGA  150

seq1  TGCCTTGAAGTCTCTCCATCAGCTCCTGTCACAGGGAAAGAGCTCAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGAAGTCTCTCCATCAGCTCCTGTCACAGGGAAAGAGCTCAGAAC  200

seq1  GAGGGGGTGTGGCAAGGAGGTGGCAGCCAGGGTGGGAGAGAGAAGTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGTGTGGCAAGGAGGTGGCAGCCAGGGTGGGAGAGAGAAGTGGAG  250

seq1  GACTTGAAGGCACTGGAGCTAGTCTAGCGGACGTTTGACCTCGTCTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAAGGCACTGGAGCTAGTCTAGCGGACGTTTGACCTCGTCTCCCT  300

seq1  TAGAAGTGCCAACCCTCCTCTAGGACTGTCCAGAACCAGGCACGCCCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTGCCAACCCTCCTCTAGGACTGTCCAGAACCAGGCACGCCCACA  350

seq1  TCTGTAGGAGGGGAGGTGGAGCGCCCGCAGACAGACGCTGCAGTTTGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGGAGGGGAGGTGGAGCGCCCGCAGACAGACGCTGCAGTTTGGCG  400

seq1  AAACAGAGGCTTATGAGGCTTATTATGCTCACTGCCCTTTTAAAAGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGGCTTATGAGGCTTATTATGCTCACTGCCCTTTTAAAAGGGAT  450

seq1  TCACCTGGTCTGAAAAAGGCTCATAGTGAAAGGGAAGAGAAGCCCAGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGGTCTGAAAAAGGCTCATAGTGAAAGGGAAGAGAAGCCCAGAGA  500

seq1  TCCCAAGTTAGCCTGCGGGCGAAATGAGACACGCAGCCTCTATGCAGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTTAGCCTGCGGGCGAAATGAGACACGCAGCCTCTATGCAGGGC  550

seq1  AGACTCTACAGTGAGGAAAGGGGCGGGTGTGTGTGTGTGGGGGG  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTACAGTGAGGAAAGGGGCGGGTGTGTGTGTGTGGGGGG  594