BAC Information

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BAC

Clone NameB6Ng01-166I24
Chromosome4 (Build37)
Map Location 44,802,806 - 44,803,864
singlet/doubletsinglet
Overlap geneZcchc7
Upstream geneOlfr156, LOC100040268, Olfr155, Reck, Glipr2, Ccin, Clta, Gne, LOC100040313, OTTMUSG00000007209, Rnf38, Melk, Pax5, 5730488B01Rik, LOC545618
Downstream geneD4Wsu132e, Grhpr, Zbtb5, 1700055D18Rik, Polr1e, Fbxo10, 1110019J04Rik, Frmpd1, Rg9mtd3, Exosc3, LOC666325, Wdr32, Mcart1, Shb, LOC100040140, LOC100040557, Gm829, LOC100040567, LOC100040580
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166I24.bB6Ng01-166I24.g
ACCDH958310DH958311
length2351,089
definitionDH958310|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I24, 5' end.DH958311|Mus musculus domesticus DNA, BAC clone: B6Ng01-166I24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atagatgaagcactaacagctcaggggactgtgtgtggggataggggctt
caaggaggtcattcaagtaaactgagtcatgagggtgaggctaatgtgct
gtgtggtgttgtcatgaggagagctacaccaggggcctgggggtgtggct
cagtggtagagcacctgcctagcttgtgcaggctctgtgttctgttaggt
ggggaagagggaaagagaatgtgaggggagagaga
gaattctttacatatcacactcacagcacagagaactaaaacagaaaaaa
ggagaactacacaagaagtacagcaattaaaaaattacctatgtagtaag
gaaagaaatgtttttgtcagccatgtatgtgatagagttcccaattgtat
ggatatgtaaggcacatgtaaccctcaaaataataacataaataacccaa
ttgaaaatggacgagaaacttgaattgatcatttttctcaagaaatatag
ttggataaaaaaatatggtgctcaatatcactagtcatagggaaatgcaa
gtcagagccaccatgagatgtcacctcatacctattcaaatggcttttat
taaaatgataaatcataccaataattgacaccgatgtgagggaaaggaaa
cctgtgtacattccagtgcagccattataggaaacagtgtcaaaatccct
caaagatctgaaaagtagcaaatggtctactactcatcccacccctgaat
gtttacatccaaagaaaacagatacttttctcaaagagaaactatgcaag
tatatacttggtaagcttgcttttcagcaggttcagttagaatagagtgg
gtgaactgagagtggtgtgttgctaatgattaagtgttctgtatcttcgg
tatattgtataaaattagttgaaagcattgatcgttaagatatctaagaa
aagacttgtgaatattgtgacattttgagactatatagtgtttctagata
gaaaccaatcagaatgctctgaggaatggatacagtccatatatatattt
ttttttttctttctgtgttccagagtgtttgttggtgtcagaagaaagct
gtatagtggtaaatacttagcaccaagttaaataagaacttgcaggctga
acagggccagtgagtaaagcagaagtgggagaatcagatctaaagctttg
attgtgtgctcgtagtcaaggaacagagatggaaacgtgtaagatattgt
aattgtacccttgactcacagtatgaacataacagtgcattacttacctg
gatgtggaacaatactttctgtttctggttaattactaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_44802806_44803864
seq2: B6Ng01-166I24.g_106_1154

seq1  ACAGAAAAAAGGAGAACTACACAAGAAGTACAGCAATTAAAAAATTACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAAAAGGAGAACTACACAAGAAGTACAGCAATTAAAAAATTACCT  50

seq1  ATGTAGTAAGGAAAGAAATGTTTTTGTCAGCCATGTATGTGATAGAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTAAGGAAAGAAATGTTTTTGTCAGCCATGTATGTGATAGAGTTC  100

seq1  CCAATTGTATGGATATGTAAGGCACATGTAACCCTCAAAATAATAACATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGTATGGATATGTAAGGCACATGTAACCCTCAAAATAATAACATA  150

seq1  AATAACCCAATTGAAAATGGACGAGAAACTTGAATTGATCATTTTTCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCCAATTGAAAATGGACGAGAAACTTGAATTGATCATTTTTCTCA  200

seq1  AGAAATATAGTTGGATAAAAAAATATGGTGCTCAATATCACTAGTCATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATATAGTTGGATAAAAAAATATGGTGCTCAATATCACTAGTCATAG  250

seq1  GGAAATGCAAGTCAGAGCCACCATGAGATGTCACCTCATACCTATTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCAAGTCAGAGCCACCATGAGATGTCACCTCATACCTATTCAAA  300

seq1  TGGCTTTTATTAAAATGATAAATCATACCAATAATTGACACCGATGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTATTAAAATGATAAATCATACCAATAATTGACACCGATGTGAG  350

seq1  GGAAAGGAAACCTGTGTACATTCCAGTGCAGCCATTATAGGAAACAGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGAAACCTGTGTACATTCCAGTGCAGCCATTATAGGAAACAGTGT  400

seq1  CAAAATCCCTCAAAGATCTGAAAAGTAGCAAATGGTCTACTACTCATCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATCCCTCAAAGATCTGAAAAGTAGCAAATGGTCTACTACTCATCCC  450

seq1  ACCCCTGAATGTTTACATCCAAAGAAAACAGATACTTTTCTCAAAGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGAATGTTTACATCCAAAGAAAACAGATACTTTTCTCAAAGAGAA  500

seq1  ACTATGCAAGTATATACTTGGTAAGCTTGCTTTTCAGCAGGTTCAGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGCAAGTATATACTTGGTAAGCTTGCTTTTCAGCAGGTTCAGTTAG  550

seq1  AATAGAGTGGGTGAACTGAGAGTGGTGTGTTGCTAATGATTAAGTGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGTGGGTGAACTGAGAGTGGTGTGTTGCTAATGATTAAGTGTTCT  600

seq1  GTATCTTCGGTATATTGTATAAAATTAGTTGAAAGCATTGATCGTTAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTCGGTATATTGTATAAAATTAGTTGAAAGCATTGATCGTTAAGA  650

seq1  TATCTAAGAAAAGACTTGTGAATATTGTGACATTTTGAGACTATATAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAGAAAAGACTTGTGAATATTGTGACATTTTGAGACTATATAGTG  700

seq1  TTTCTAGATAGAAACCAATCAGAATGCTCTGAGGAATGGATACAGTCCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGATAGAAACCAATCAGAATGCTCTGAGGAATGGATACAGTCCAT  750

seq1  ATATATA-TTTTTTTTTTCTTTCTGTGTTCCAGAGTGTTTGTTGGTGTCA  799
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTTTTTTTTTTCTTTCTGTGTTCCAGAGTGTTTGTTGGTGTCA  800

seq1  GAAGAAAGCTGTATAGTGGTAAATACTTAGCACCAAGTTAAATAAGAACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGCTGTATAGTGGTAAATACTTAGCACCAAGTTAAATAAGAACT  850

seq1  TGCAGGCTGAACAGGGCCAGTGAGTAAAGCAGAAGTGGGAGAATCAGAAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  TGCAGGCTGAACAGGGCCAGTGAGTAAAGCAGAAGTGGGAGAATCAG-AT  899

seq1  CTAAAGCTTTGATTGTGTGCTCGTAGTCAAGGAACAGAGAATGGAAACGT  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTAAAGCTTTGATTGTGTGCTCGTAGTCAAGGAACAGAG-ATGGAAACGT  948

seq1  GTAAAGATAATTGTAATTGTACCCTTTGACTCACAGTAATGAACATAACA  999
      || ||||| ||||||||||||||| |||||||||||| ||||||||||| 
seq2  GT-AAGAT-ATTGTAATTGTACCC-TTGACTCACAGT-ATGAACATAAC-  993

seq1  AGTGCATATACTTACCT-GATGTGGAAACAAATACTTTCTGTTTCTGGGT  1048
      ||||||| ||||||||| |||||||||   |||||||||||||||| |||
seq2  AGTGCAT-TACTTACCTGGATGTGGAA--CAATACTTTCTGTTTCT-GGT  1039

seq1  TAATTAACTAA  1059
      ||||| |||||
seq2  TAATT-ACTAA  1049