BAC Information

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BAC

Clone NameB6Ng01-166M07
Chromosome4 (Build37)
Map Location 25,402,048 - 25,532,835
singlet/doubletdoublet
Overlap geneLOC625732
Upstream geneF730047E07Rik, Klhl32, 1110007M04Rik, C230012O17Rik, Gpr63, Fhl5, 1810074P20Rik, Prdx6-rs2, LOC665019
Downstream geneFut9, LOC100040780, Hn1-ps1, Manea, Bhmt-ps1, LOC665079, Gng2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-166M07.bB6Ng01-166M07.g
ACCDH958452DH958453
length1,0191,103
definitionDH958452|Mus musculus domesticus DNA, BAC clone: B6Ng01-166M07, 5' end.DH958453|Mus musculus domesticus DNA, BAC clone: B6Ng01-166M07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(25,402,048 - 25,403,067)(25,531,721 - 25,532,835)
sequence
gaattctattatatactgaaggccaactgtgacatctagtcttgtggact
gaaaaactactagattcgtggactttctgtttttagacagctgttgttgg
attagcaaaaaaaacccaaatcattctattccattttctttctctctcaa
ggaaacaaaccctctaaatcgaaattattgttgaatgtatgaacacacag
agctgaggctgtgtgtgcaagacctgcgtgagtctgcatcaatagggtcc
tagagatgaaaggagaagtagatacatgccctatctctcacccagaagta
atctccaactgagaaacactacaaaggaaactttagattcctccaaggga
gacaaattactcttaagtataggttatatggccagcactagatggcctac
acagaaagaattaaatggcatccttggaggttccttgtctcacaatgtca
tatcagggcttcaacttgctttttgttaattttatctttttttttttttc
ctgagacgggtttgtgtagccctggctgtcctggaactcactgtgtaaac
caggcatggcctcaaactcagaaatctgcctgcctctgcctcccaagtgc
tgggattaaaggtatgtgccaccactacccagcttgttaattttaacttc
tctttaattttgttatattttatttatatatttttattctcttcttaccc
tacatattctttgcatatatattatgacttccaatttagtgttttttata
tgattcttgagtatgtaaatgagtgggtctcattctggtgtctgtagtat
caaaaaaattaaataaaatccatcagtgggtttctcgatacccaccccaa
tgttatgggttccaaatgaaagacacacccactgcatttatcttttctta
ttccttaatcagctccatggctgggccactttctaacctacatgtggtta
atccacctcccaccagtaatctcaatttataacttaataaattctatatt
tatcttgggctgccctgga
ctcttcacagcagtccatccttctattttcacacctaacttgcctttgtg
ctttgtttttattttaaccactgtgttttatatctttgcttatacgaata
actataaatagggagttacatacttgagcatgagctgtctgtcactaaag
aaagtgacaatgctctctgtaattattaactacccacagtcacttagcag
gggtggagcttcaaaggcctctcctctgtatggtggagggtgtggacccc
atcttgtataggttttgttttggcacaaatatgtgagtagtatatgtgaa
tgtgcccttttcacatatatgtgagtttatggcaggcctgaactcctata
agagaagaggaaatcagagagaacacatactaccttgtgacatgatgttt
tccactaaacaagatccatcaagaagactcactggatgcctaccagaccc
tggtgctagtctctagtacttctatacttcatgaaccttgacacaaaagg
aactccactcttaagtaaatttgcagtcacaattatgcagcaatagcaac
aaaacatggaccaaaacactgctttatatttcttaatatatattataaaa
gtaataaatatatcaacatgagtatataaggttaaattttattaatgaaa
caaaattccaccaatatccttaaaaattccatcaatgaataggaaaaaca
gcttgttttcacgcaagaaccagaaggcaaaatttaaatagttttaatgt
agggtttaatgctttacagacttttatttgaaaagcaaagaaaagatttt
attgaaaggacccagatgtagctgtctcttgtgagactatgccgggccta
gcaaacacagaagtggatgctcacagtcagctaatggatggatcataggc
ttccaatgagagctagagaaagtagccaaggagctaaaggatctgcaacc
ctatagtggaacaacattatggactaaccagtaccccggagcctctgacc
tcttagctgcatataatcaaagaatggctagtcgcccattcactggaagg
aaggccattgactctgcaaccttaatgctccagtacagggacaccaggtc
caa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_25402048_25403067
seq2: B6Ng01-166M07.b_47_1065

seq1  GAATTCTATTATATACTGAAGGCCAACTGTGACATCTAGTCTTGTGGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTATATACTGAAGGCCAACTGTGACATCTAGTCTTGTGGACT  50

seq1  GAAAAACTACTAGATTCGTGGACTTTCTGTTTTTAGACAGCTGTTGTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAACTACTAGATTCGTGGACTTTCTGTTTTTAGACAGCTGTTGTTGG  100

seq1  ATTAGCAAAAAAAACCCAAATCATTCTATTCCATTTTCTTTCTCTCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAAAAAAAACCCAAATCATTCTATTCCATTTTCTTTCTCTCTCAA  150

seq1  GGAAACAAACCCTCTAAATCGAAATTATTGTTGAATGTATGAACACACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAACCCTCTAAATCGAAATTATTGTTGAATGTATGAACACACAG  200

seq1  AGCTGAGGCTGTGTGTGCAAGACCTGCGTGAGTCTGCATCAATAGGGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGCTGTGTGTGCAAGACCTGCGTGAGTCTGCATCAATAGGGTCC  250

seq1  TAGAGATGAAAGGAGAAGTAGATACATGCCCTATCTCTCACCCAGAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATGAAAGGAGAAGTAGATACATGCCCTATCTCTCACCCAGAAGTA  300

seq1  ATCTCCAACTGAGAAACACTACAAAGGAAACTTTAGATTCCTCCAAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCAACTGAGAAACACTACAAAGGAAACTTTAGATTCCTCCAAGGGA  350

seq1  GACAAATTACTCTTAAGTATAGGTTATATGGCCAGCACTAGATGGCCTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATTACTCTTAAGTATAGGTTATATGGCCAGCACTAGATGGCCTAC  400

seq1  ACAGAAAGAATTAAATGGCATCCTTGGAGGTTCCTTGTCTCACAATGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGAATTAAATGGCATCCTTGGAGGTTCCTTGTCTCACAATGTCA  450

seq1  TATCAGGGCTTCAACTTGCTTTTTGTTAATTTTATCTTTTTTTTTTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGGCTTCAACTTGCTTTTTGTTAATTTTATCTTTTTTTTTTTTTC  500

seq1  CTGAGACGGGTTTGTGTAGCCCTGGCTGTCCTGGAACTCACTGTGTAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACGGGTTTGTGTAGCCCTGGCTGTCCTGGAACTCACTGTGTAAAC  550

seq1  CAGGCATGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATGGCCTCAAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGC  600

seq1  TGGGATTAAAGGTATGTGCCACCACTACCCAGCTTGTTAATTTTAACTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTAAAGGTATGTGCCACCACTACCCAGCTTGTTAATTTTAACTTC  650

seq1  TCTTTAATTTTGTTATATTTTATTTATATATTTTTATTCTCTTCTTACCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAATTTTGTTATATTTTATTTATATATTTTTATTCTCTTCTTACCC  700

seq1  TACATATTCTTTGCATATATATTATGACTTCCAATTTAGTGTTTTTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTCTTTGCATATATATTATGACTTCCAATTTAGTGTTTTTTATA  750

seq1  TGATTCTTGAGTATGTAAATGAGTGGGTCTCATTCTGGTGTCTGTAGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTGAGTATGTAAATGAGTGGGTCTCATTCTGGTGTCTGTAGTAT  800

seq1  CAAAAAAATTAAATAAAATCCATCAGTGGGTTTCTCGATACCCACCCCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAATTAAATAAAATCCATCAGTGGGTTTCTCGATACCCACCCCAA  850

seq1  TGTTATGGGTTCCCAAATGAAAGACACACCCACTGCATTTATCTTTTCTT  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGTTATGGGTT-CCAAATGAAAGACACACCCACTGCATTTATCTTTTCTT  899

seq1  ATTCCTTAATCAGCTCCATGGCTGGGCCACTTTCTAACCTACATGTGGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTAATCAGCTCCATGGCTGGGCCACTTTCTAACCTACATGTGGTT  949

seq1  AATCCACCTCCCACCAGTAATCTCAATTTATTACTTAATAAATTCTATAT  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  AATCCACCTCCCACCAGTAATCTCAATTTATAACTTAATAAATTCTATA-  998

seq1  TTTATCTT-GGCTGCTCTGGA  1020
      |||||||| |||||| |||||
seq2  TTTATCTTGGGCTGCCCTGGA  1019

seq1: chr4_25531721_25532835
seq2: B6Ng01-166M07.g_146_1248 (reverse)

seq1  TTGGCCCTGGTGTTCCCCTGTACTGGGGCATATAAAGTTTGCA-AGTCCA  49
      |||| ||||||||  ||||||||||| ||  || ||| ||||| ||| ||
seq2  TTGGACCTGGTGT--CCCTGTACTGGAGC--ATTAAGGTTGCAGAGT-CA  45

seq1  ATGGGCCTCTCTTTCCAGTG-ATGGCCGACTAGGCCATCTTTTGATATAT  98
      || ||||| || |||||||| |||| |||||| |||||  |||||| |||
seq2  AT-GGCCT-TCCTTCCAGTGAATGGGCGACTA-GCCATTCTTTGAT-TAT  91

seq1  ATGCAGCT-AGA-GTCAAGAGCTCCGGGGTACTGGTTAGTTCATAATGTT  146
      |||||||| ||| ||||   |||||||||||||||||||| |||||||||
seq2  ATGCAGCTAAGAGGTCAGAGGCTCCGGGGTACTGGTTAGTCCATAATGTT  141

seq1  GTTCCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGCTACTTTCTCT  196
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTCCA-CTATAGGGTTGCAGAT-CCTTTAGCTCCTTGGCTACTTTCTCT  189

seq1  AGCTCCTCCATTGGGAGCCCTATGATCCATCCATTAGCTGACTGTGAGCA  246
      |||||   |||||| || ||||||||||||||||||||||||||||||||
seq2  AGCTC--TCATTGGAAG-CCTATGATCCATCCATTAGCTGACTGTGAGCA  236

seq1  TCCACTTCTGTGTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTA  296
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCACTTCTGTGTTTGCTAGG-CCCGGCATAGTCTCACAAGAGACAGCTA  285

seq1  CATCTGGGTCCTTTCAATAAAATCTTTTTCTTTGCTTTTCAAATAAAAGT  346
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CATCTGGGTCCTTTCAATAAAATC-TTTTCTTTGCTTTTCAAATAAAAGT  334

seq1  CTGTAAAGCATTAAACCCTACATTAAAACTATTTAAATTTTGCCTTCTGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAAGCATTAAACCCTACATTAAAACTATTTAAATTTTGCCTTCTGG  384

seq1  TTCTTGCCTGAAAACAAGCTGTTTTTCCTATTCATTGATGGAATTTTTAA  446
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCGTGAAAACAAGCTGTTTTTCCTATTCATTGATGGAATTTTTAA  434

seq1  GGATATTGGTGGAATTTTGTTTCATTAATAAAATTTAACCTTATATACTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTGGTGGAATTTTGTTTCATTAATAAAATTTAACCTTATATACTC  484

seq1  ATGTTGATATATTTATTACTTTTATAATATATATTAAGAAATATAAAGCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGATATATTTATTACTTTTATAATATATATTAAGAAATATAAAGCA  534

seq1  GTGTTTTGGTCCATGTTTTGTTGCTATTGCTGCATAATTGTGACTGCAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGGTCCATGTTTTGTTGCTATTGCTGCATAATTGTGACTGCAAA  584

seq1  TTTACTTAAGAGTGGAGTTCCTTTTGTGTCAAGGTTCATGAAGTATAGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTAAGAGTGGAGTTCCTTTTGTGTCAAGGTTCATGAAGTATAGAA  634

seq1  GTACTAGAGACTAGCACCAGGGTCTGGTAGGCATCCAGTGAGTCTTCTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAGAGACTAGCACCAGGGTCTGGTAGGCATCCAGTGAGTCTTCTTG  684

seq1  ATGGATCTTGTTTAGTGGAAAACATCATGTCACAAGGTAGTATGTGTTCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCTTGTTTAGTGGAAAACATCATGTCACAAGGTAGTATGTGTTCT  734

seq1  CTCTGATTTCCTCTTCTCTTATAGGAGTTCAGGCCTGCCATAAACTCACA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATTTCCTCTTCTCTTATAGGAGTTCAGGCCTGCCATAAACTCACA  784

seq1  TATATGTGAAAAGGGCACATTCACATATACTACTCACATATTTGTGCCAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGAAAAGGGCACATTCACATATACTACTCACATATTTGTGCCAA  834

seq1  AACAAAACCTATACAAGATGGGGTCCACACCCTCCACCATACAGAGGAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCTATACAAGATGGGGTCCACACCCTCCACCATACAGAGGAGA  884

seq1  GGCCTTTGAAGCTCCACCCCTGCTAAGTGACTGTGGGTAGTTAATAATTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTGAAGCTCCACCCCTGCTAAGTGACTGTGGGTAGTTAATAATTA  934

seq1  CAGAGAGCATTGTCACTTTCTTTAGTGACAGACAGCTCATGCTCAAGTAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCATTGTCACTTTCTTTAGTGACAGACAGCTCATGCTCAAGTAT  984

seq1  GTAACTCCCTATTTATAGTTATTCGTATAAGCAAAGATATAAAACACAGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCCCTATTTATAGTTATTCGTATAAGCAAAGATATAAAACACAGT  1034

seq1  GGTTAAAATAAAAACAAAGCACAAAGGCAAGTTAGGTGTGAAAATAGAAG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAATAAAAACAAAGCACAAAGGCAAGTTAGGTGTGAAAATAGAAG  1084

seq1  GATGGACTGCTGTGAAGAG  1115
      |||||||||||||||||||
seq2  GATGGACTGCTGTGAAGAG  1103