BAC Information

Click to search

BAC

Clone NameB6Ng01-167D11
Chromosome4 (Build37)
Map Location 150,600,192 - 150,735,198
singlet/doubletdoublet
Overlap geneCamta1
Upstream geneLOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3
Downstream geneLOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167D11.bB6Ng01-167D11.g
ACCDH958773DH958774
length802232
definitionDH958773|Mus musculus domesticus DNA, BAC clone: B6Ng01-167D11, 5' end.DH958774|Mus musculus domesticus DNA, BAC clone: B6Ng01-167D11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,600,192 - 150,600,992)(150,734,967 - 150,735,198)
sequence
gaattctcctccaggaggggaacctgagcactgcccttcatctccccagt
gctggattgaggaggaaacactcatagaatgtaggtgtagccacagagtt
gcctcattgaaggcacgatgatcttaggggcaggctctgggcccctccct
cccaaggctgtgagtgttcacctgtcatggagggccttggtcaatggaat
caccttgctcagtgcctgcgtcctcctccccccccccccaaaataaactg
atctgcggcctgaacaggtccactgagctccaaactttgccccctgtgaa
aatctgaagcatgcagctgggctggctgccccctccgctccctgatcctt
taatctgagactattaaaacttcattccacttctattggtaaaccatcca
tcactctcaccaagcagcgcagggctgtgggagcccagcgggagggcggc
aggcagagggaggggtaggcaggcagactgcccccagctgcctgccctgc
cagtcctggccagaatggggcggggaggccgctgtccttgaagaggacaa
ggctcgtgagtgaagggacatgacaaagtgatgtcagggtgggggacatg
gcagaggcttgccatggccgcaggagggctgactggggcccgccctcaat
gtgtggaggcagaaccacaatgaagcagacattaccattggtgccagctg
acactccctgaccctggcacggtggtcttagatctccctaggtggctgct
tgcttcctattctttgacaccaggccctactttaccctggtctttgacat
ca
cctagccacgtgccctcctcctgggcaagggtcagccacagcttacccac
ttcccagagttttctgaaggtccaaggggtagaaatgatgatctggctgg
cctggggctgcctggagttgagctctaaactcagagcttgctagtgtaag
agctaggggttgagtgtcctatacaaagacagccttcacttctgacacta
gctgcaagttccgggtgggtggggtggggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_150600192_150600992
seq2: B6Ng01-167D11.b_46_847

seq1  GAATTCTCCTCCAGGAGGGGAACCTGAGCACTGCCCTTCATCTCCCCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTCCAGGAGGGGAACCTGAGCACTGCCCTTCATCTCCCCAGT  50

seq1  GCTGGATTGAGGAGGAAACACTCATAGAATGTAGGTGTAGCCACAGAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATTGAGGAGGAAACACTCATAGAATGTAGGTGTAGCCACAGAGTT  100

seq1  GCCTCATTGAAGGCACGATGATCTTAGGGGCAGGCTCTGGGCCCCTCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATTGAAGGCACGATGATCTTAGGGGCAGGCTCTGGGCCCCTCCCT  150

seq1  CCCAAGGCTGTGAGTGTTCACCTGTCATGGAGGGCCTTGGTCAATGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGCTGTGAGTGTTCACCTGTCATGGAGGGCCTTGGTCAATGGAAT  200

seq1  CACCTTGCTCAGTGCCTGCGTCCTCCT-CCCCCCCCCCCAAAATAAACTG  249
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CACCTTGCTCAGTGCCTGCGTCCTCCTCCCCCCCCCCCCAAAATAAACTG  250

seq1  ATCTGCGGCCTGAACAGGTCCACTGAGCTCCAAACTTTGCCCCCTGTGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCGGCCTGAACAGGTCCACTGAGCTCCAAACTTTGCCCCCTGTGAA  300

seq1  AATCTGAAGCATGCAGCTGGGCTGGCTGCCCCCTCCGCTCCCTGATCCTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAAGCATGCAGCTGGGCTGGCTGCCCCCTCCGCTCCCTGATCCTT  350

seq1  TAATCTGAGACTATTAAAACTTCATTCCACTTCTATTGGTAAACCATCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGAGACTATTAAAACTTCATTCCACTTCTATTGGTAAACCATCCA  400

seq1  TCACTCTCACCAAGCAGCGCAGGGCTGTGGGAGCCCAGCGGGAGGGCGGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTCACCAAGCAGCGCAGGGCTGTGGGAGCCCAGCGGGAGGGCGGC  450

seq1  AGGCAGAGGGAGGGGTAGGCAGGCAGACTGCCCCCAGCTGCCTGCCCTGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGGAGGGGTAGGCAGGCAGACTGCCCCCAGCTGCCTGCCCTGC  500

seq1  CAGTCCTGGCCAGAATGGGGCGGGGAGGCCGCTGTCCTTGAAGAGGACAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTGGCCAGAATGGGGCGGGGAGGCCGCTGTCCTTGAAGAGGACAA  550

seq1  GGCTCGTGAGTGAAGGGACATGACAAAGTGATGTCAGGGTGGGGGACATG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCGTGAGTGAAGGGACATGACAAAGTGATGTCAGGGTGGGGGACATG  600

seq1  GCAGAGGCTTGCCATGGCCGCAGGAGGGCTGACTGGGGCCCGCCCTCAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCTTGCCATGGCCGCAGGAGGGCTGACTGGGGCCCGCCCTCAAT  650

seq1  GTGTGGAGGCAGAACCACAATGAAGCAGACATTACCATTGGTGCCAGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGAGGCAGAACCACAATGAAGCAGACATTACCATTGGTGCCAGCTG  700

seq1  ACACTCCCTGACCCTGGCACGGTGGTCTTAGATCTCCCTAGGTGGCTGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCCCTGACCCTGGCACGGTGGTCTTAGATCTCCCTAGGTGGCTGCT  750

seq1  TGCTTCCTATTCTTTGACACCAGGCCCTACTTTACCCTGGCCTTTGACAA  799
      |||||||||||||||||||||||||||||||||||||||| |||||||| 
seq2  TGCTTCCTATTCTTTGACACCAGGCCCTACTTTACCCTGGTCTTTGACAT  800

seq1  CA  801
      ||
seq2  CA  802

seq1: chr4_150734967_150735198
seq2: B6Ng01-167D11.g_74_305 (reverse)

seq1  ACCCCCCACCCCACCCACCCGGAACTTGCAGCTAGTGTCAGAAGTGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCCACCCCACCCACCCGGAACTTGCAGCTAGTGTCAGAAGTGAAGG  50

seq1  CTGTCTTTGTATAGGACACTCAACCCCTAGCTCTTACACTAGCAAGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTGTATAGGACACTCAACCCCTAGCTCTTACACTAGCAAGCTCT  100

seq1  GAGTTTAGAGCTCAACTCCAGGCAGCCCCAGGCCAGCCAGATCATCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTAGAGCTCAACTCCAGGCAGCCCCAGGCCAGCCAGATCATCATTT  150

seq1  CTACCCCTTGGACCTTCAGAAAACTCTGGGAAGTGGGTAAGCTGTGGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCCTTGGACCTTCAGAAAACTCTGGGAAGTGGGTAAGCTGTGGCTG  200

seq1  ACCCTTGCCCAGGAGGAGGGCACGTGGCTAGG  232
      ||||||||||||||||||||||||||||||||
seq2  ACCCTTGCCCAGGAGGAGGGCACGTGGCTAGG  232