BAC Information

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BAC

Clone NameB6Ng01-167E07
Chromosome4 (Build37)
Map Location 128,965,398 - 129,168,393
singlet/doubletdoublet
Overlap geneSync, Rbbp4, Zbtb8os, 2410081M15Rik, LOC100039588, Zbtb8, Bsdc1, Tssk3
Upstream geneZscan20, Tlr12, Phc2, A3galt2, BC039093, LOC667354, Trim62, Adc, Ak2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080
Downstream gene1700125D06Rik, Marcksl1, Hdac1, Lck, BC030183, Eif3s2, 2510006D16Rik, LOC667452, Iqcc, Ccdc28b, Txlna, Kpna6, Tmem39b, Khdrbs1, LOC100040532, Ptp4a2, LOC622469, LOC622480, 1700003M07Rik, Bai2, Col16a1, Pef1, Hcrtr1, Tinagl, Gm853, Serinc2, Fabp3, Zcchc17, Wdr57, 2610200G18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167E07.bB6Ng01-167E07.g
ACCDH958811DH958812
length1,080897
definitionDH958811|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E07, 5' end.DH958812|Mus musculus domesticus DNA, BAC clone: B6Ng01-167E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,965,398 - 128,966,476)(129,167,493 - 129,168,393)
sequence
gaattcactgcatttgagccacttggtgcagggttgggcacctgccagct
tgaagttgagtctgttcggtcagctctctctccctggtgtggctcagggt
ggtggcctagagaggcagttgttctcctggcctagcactgggccctggct
gagcccaacagctgtccacactggaactttaccactggggattgtggagt
cattttgcctcaggtcacattgtggcccagggacttcccagtgtatcaaa
ttatgggaatacttcctggtaaaccctgttgtcacatgagaagacaaccc
taagctgggttcttaacacattttgcctgtattccctacacacacactaa
taagcttgaagccaggcacgaacctttgtttgcatgacatgtaatacaca
cgtccaagtcacagtctgatggacagcataaaggagttgcccaagtcctc
tgggacagagacagagtggcagaggtgttgaggtcagggaccccagctgg
gccctgtccctctcttgcttggcctcctgtaatctgcttctatgccagct
cagtagagaggcagttagccgaggacaacctctggtacccagggtggtgt
ggcagcctgtaactcaggaggcctgggttctataccacagacctgccact
tgaccttgggcacaacttcccctggaagttcagttgttttcttcttgcct
tccaagggccccacaagtagccctgtcctcaggacatccgctctcatcca
gtggacaaacgtacctgtataacttaaagtcactcctcctgatgatgaaa
ctgcattccattcagaatgtcctgaagacacaagttggtattgttgggat
acggtaccaaggagatggagttgcagcatgtttagacatttgttaagtaa
acagattttttaaaaaaatatttctttagccctggccatcctgggaaatc
actctgtagatcagctggcctttaactcactgaaatccacctgcttctgc
ctcccaagtgctgggattaagacatgccgccaccacctgcccagcaccga
ttacctttttttttttttaagatatttatt
gaattcttaggcagtcccagagcgttccggcatttagtgagggcccgggc
ctgaggccagagggctctggagatcgcaccttggtgaccagtttgcactc
tttcccaacagctggatggggacttcggaggtgagggcgacctgcctgga
agcggagcccacatggagaaggcccgcctccctgacctacgcggccaccc
aggcccgttccccagcatcgctaccactctgcgccttgctcaagactgac
ttaacccatgctggatttgctggtggtggcgagggaaagtagggacactg
cccatgttgtctgagggtcacacagcatttacatcacaattgggcaggag
tttaaaaatgtctggtcctctccctccccaccacctgtggctgtgtccag
acggagaatgttctagccctggaggcagctgtgaatgaagtccttggggg
gaaaagaagcaggccgagggcgatggtggagtagagctgcctcgcagagg
cagcatgagctgagagggtgacaagaaggaggcgctacacagcatggagg
actttctactctccaatgggtatcagctgggcaagaccattggggaaggg
acctactcaaaagtcaaagaagcattttccaaaaaacatcaaagaaaagt
ggcaattaaaattatagacaagatgggagggccagaaggtgagctggggt
ccttgggaggaagggtgggctagccaacacgggttggccctttcctcaga
gcatctcttcctccctttgagtcaggatggcagatagcaagtcagattcc
tgccctaaatagaaggatgtagggaaccaggatcctcacaccttccagag
ccacatcgtagctcaagaaaaagaaaggtcctaaaccgggcgtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_128965398_128966476
seq2: B6Ng01-167E07.b_45_1124

seq1  GAATTCACTGCATTTGAGCCACTTGGTGCAGGGTTGGGCACCTGCCAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCATTTGAGCCACTTGGTGCAGGGTTGGGCACCTGCCAGCT  50

seq1  TGAAGTTGAGTCTGTTCGGTCAGCTCTCTCTCCCTGGTGTGGCTCAGGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTGAGTCTGTTCGGTCAGCTCTCTCTCCCTGGTGTGGCTCAGGGT  100

seq1  GGTGGCCTAGAGAGGCAGTTGTTCTCCTGGCCTAGCACTGGGCCCTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCCTAGAGAGGCAGTTGTTCTCCTGGCCTAGCACTGGGCCCTGGCT  150

seq1  GAGCCCAACAGCTGTCCACACTGGAACTTTACCACTGGGGATTGTGGAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCAACAGCTGTCCACACTGGAACTTTACCACTGGGGATTGTGGAGT  200

seq1  CATTTTGCCTCAGGTCACATTGTGGCCCAGGGACTTCCCAGTGTATCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGCCTCAGGTCACATTGTGGCCCAGGGACTTCCCAGTGTATCAAA  250

seq1  TTATGGGAATACTTCCTGGTAAACCCTGTTGTCACATGAGAAGACAACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGGAATACTTCCTGGTAAACCCTGTTGTCACATGAGAAGACAACCC  300

seq1  TAAGCTGGGTTCTTAACACATTTTGCCTGTATTCCCTACACACACACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTGGGTTCTTAACACATTTTGCCTGTATTCCCTACACACACACTAA  350

seq1  TAAGCTTGAAGCCAGGCACGAACCTTTGTTTGCATGACATGTAATACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTTGAAGCCAGGCACGAACCTTTGTTTGCATGACATGTAATACACA  400

seq1  CGTCCAAGTCACAGTCTGATGGACAGCATAAAGGAGTTGCCCAAGTCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCAAGTCACAGTCTGATGGACAGCATAAAGGAGTTGCCCAAGTCCTC  450

seq1  TGGGACAGAGACAGAGTGGCAGAGGTGTTGAGGTCAGGGACCCCAGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACAGAGACAGAGTGGCAGAGGTGTTGAGGTCAGGGACCCCAGCTGG  500

seq1  GCCCTGTCCCTCTCTTGCTTGGCCTCCTGTAATCTGCTTCTATGCCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGTCCCTCTCTTGCTTGGCCTCCTGTAATCTGCTTCTATGCCAGCT  550

seq1  CAGTAGAGAGGCAGTTAGCCGAGGACAACCTCTGGTACCCAGGGTGGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAGAGGCAGTTAGCCGAGGACAACCTCTGGTACCCAGGGTGGTGT  600

seq1  GGCAGCCTGTAACTCAGGAGGCCTGGGTTCTATACCACAGACCTGCCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCTGTAACTCAGGAGGCCTGGGTTCTATACCACAGACCTGCCACT  650

seq1  TGACCTTGGGCACAACTTCCCCTGGAAGTTCAGTTGTTTTCTTCTTGCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTGGGCACAACTTCCCCTGGAAGTTCAGTTGTTTTCTTCTTGCCT  700

seq1  TCCAAGGGCCCCACAAGTAGCCCTGTCCTCAGGACATCCGCTCTCATCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGGCCCCACAAGTAGCCCTGTCCTCAGGACATCCGCTCTCATCCA  750

seq1  GTGGACAAACGTACCTGTATAACTTAAAGTCACTCCTCCTGATGATGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACAAACGTACCTGTATAACTTAAAGTCACTCCTCCTGATGATGAAA  800

seq1  CTGCATTCCATTCAGAATGTCCTGAAGACACAAGTTGGTATTGTTGGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTCCATTCAGAATGTCCTGAAGACACAAGTTGGTATTGTTGGGAT  850

seq1  ACGGTACCAAGGAGATGGAGTTGCAGCATGTTTAGACATTTGTTAAGTAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTACCAAGGAGATGGAGTTGCAGCATGTTTAGACATTTGTTAAGTAA  900

seq1  ACAGATTTTTTAAAAAAATATTTCTTTTAGCCCTGGCCATCCT-GGAAAT  949
      |||||||||||||||||||||||| |||||||||||||||||| ||||||
seq2  ACAGATTTTTTAAAAAAATATTTC-TTTAGCCCTGGCCATCCTGGGAAAT  949

seq1  CACTCTGTAGATCAGGCTGGCCTTTAACTCACTGAAATCCACCTGCTTCT  999
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CACTCTGTAGATCA-GCTGGCCTTTAACTCACTGAAATCCACCTGCTTCT  998

seq1  GCCTCCCAAGTGCTGGGATTAAAGACATG-CGCCACCA-CTGCCCAGCAA  1047
      |||||||||||||||||||| |||||||| |||||||| ||||||||| |
seq2  GCCTCCCAAGTGCTGGGATT-AAGACATGCCGCCACCACCTGCCCAGC-A  1046

seq1  CAGATTACTTTTTTTTTTTTTAAAG--ATTTATT  1079
      | |||||| |||||||||||| |||  |||||||
seq2  CCGATTACCTTTTTTTTTTTTTAAGATATTTATT  1080

seq1: chr4_129167493_129168393
seq2: B6Ng01-167E07.g_67_963 (reverse)

seq1  CACCACGCCCGGTTTAGGACCCTTTCTTTTTCTTGTGCTACGATTGTGGC  50
      ||||||||||||||||||| ||||||||||||||| ||||||| ||||||
seq2  CACCACGCCCGGTTTAGGA-CCTTTCTTTTTCTTGAGCTACGA-TGTGGC  48

seq1  TCTGGAAAGGTGTGAGGATCCTGGTTTCCCTACATCCTTCTATTTAGGGC  100
      ||||| |||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTGG-AAGGTGTGAGGATCCTGG-TTCCCTACATCCTTCTATTTAGGGC  96

seq1  AGGAATCTGACTTGCTTTCTGCCATCCTGACTCAAAGGGAGGAAGAGATG  150
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AGGAATCTGACTTGCTATCTGCCATCCTGACTCAAAGGGAGGAAGAGATG  146

seq1  CTCTGAGGAAAGGGCCTACCCGTGTTGGCTAGCCCACCCTTCCTCCCAAG  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CTCTGAGGAAAGGGCCAACCCGTGTTGGCTAGCCCACCCTTCCTCCCAAG  196

seq1  GACCCCAGCTCACCTTCTGGCCCTCCCATCTTGTCTATAATTTTAATTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCAGCTCACCTTCTGGCCCTCCCATCTTGTCTATAATTTTAATTGC  246

seq1  CACTTTTCTTTGATGTTTTTTGGAAAATGCTTCTTTGACTTTTGAGTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTCTTTGATGTTTTTTGGAAAATGCTTCTTTGACTTTTGAGTAGG  296

seq1  TCCCTTCCCCAATGGTCTTGCCCAGCTGATACCCATTGGAGAGTAGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCCCCAATGGTCTTGCCCAGCTGATACCCATTGGAGAGTAGAAAG  346

seq1  TCCTCCATGCTGTGTAGCGCCTCCTTCTTGTCACCCTCTCAGCTCATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATGCTGTGTAGCGCCTCCTTCTTGTCACCCTCTCAGCTCATGCT  396

seq1  GCCTCTGCGAGGCAGCTCTACTCCACCATCGCCCTCGGCCTGCTTCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCGAGGCAGCTCTACTCCACCATCGCCCTCGGCCTGCTTCTTTT  446

seq1  CCCCCCAAGGACTTCATTCACAGCTGCCTCCAGGGCTAGAACATTCTCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCAAGGACTTCATTCACAGCTGCCTCCAGGGCTAGAACATTCTCCG  496

seq1  TCTGGACACAGCCACAGGTGGTGGGGAGGGAGAGGACCAGACATTTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACACAGCCACAGGTGGTGGGGAGGGAGAGGACCAGACATTTTTAA  546

seq1  ACTCCTGCCCAATTGTGATGTAAATGCTGTGTGACCCTCAGACAACATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGCCCAATTGTGATGTAAATGCTGTGTGACCCTCAGACAACATGG  596

seq1  GCAGTGTCCCTACTTTCCCTCGCCACCACCAGCAAATCCAGCATGGGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGTCCCTACTTTCCCTCGCCACCACCAGCAAATCCAGCATGGGTTA  646

seq1  AGTCAGTCTTGAGCAAGGCGCAGAGTGGTAGCGATGCTGGGGAACGGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTCTTGAGCAAGGCGCAGAGTGGTAGCGATGCTGGGGAACGGGCC  696

seq1  TGGGTGGCCGCGTAGGTCAGGGAGGCGGGCCTTCTCCATGTGGGCTCCGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGCCGCGTAGGTCAGGGAGGCGGGCCTTCTCCATGTGGGCTCCGC  746

seq1  TTCCAGGCAGGTCGCCCTCACCTCCGAAGTCCCCATCCAGCTGTTGGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGCAGGTCGCCCTCACCTCCGAAGTCCCCATCCAGCTGTTGGGAA  796

seq1  AGAGTGCAAACTGGTCACCAAGGTGCGATCTCCAGAGCCCTCTGGCCTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCAAACTGGTCACCAAGGTGCGATCTCCAGAGCCCTCTGGCCTCA  846

seq1  GGCCCGGGCCCTCACTAAATGCCGGAACGCTCTGGGACTGCCTAAGAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGGGCCCTCACTAAATGCCGGAACGCTCTGGGACTGCCTAAGAATT  896

seq1  C  901
      |
seq2  C  897