BAC Information

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BAC

Clone NameB6Ng01-167I20
Chromosome4 (Build37)
Map Location 146,820,767 - 146,821,904
singlet/doubletsinglet
Overlap genenone
Upstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701
Downstream geneOTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167I20.bB6Ng01-167I20.g
ACCDH959014DH959015
length1,2411,131
definitionDH959014|Mus musculus domesticus DNA, BAC clone: B6Ng01-167I20, 5' end.DH959015|Mus musculus domesticus DNA, BAC clone: B6Ng01-167I20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccattaatccacctacttatttctttctataccagtaccatacaa
atttttattactatttttctgccatacatctttaagttacagaaattgat
agctccagatttttttttgttgttcaagaatattttatctatcctgtggt
ttttgttttgtttactgttccatacaacgttgagaatatttctttcaaga
tctgtgaagatttgtgctaaatttttgataagaattgtactgagtgtcta
gattgctttttggtaagatggacatattcattatgttaatcctattgata
catgaacaagagagatcttttcatgttctgatatcttcctgtttctttct
taagatactttaagttcttctcctacaggttttcacttgcttgtttagag
gtaactgaaggtattttattttgtttgtggctaaagtggagggttctgtt
tccataacttctttttcaacccttttaatcaattgtgtgtagcagggcta
aggctttctttaagtcaattgtgtatgcagacactttgctaaaatgttta
tcaactgtaattttttggtagaattttttgtctcacttatatacattatc
ataatatctgaatttcttcttttccaaattgtattcccttgatctcttaa
gctgctttattgcttgagctaatacttccagtactatatcaaagagatga
ggggatagtggacagcttttccttgttcctgattttaatggaaatgctta
aaatttctctctatttagtttgattttgggtgatagattgctgaacattg
cctatattttgtttaggtataccccttgcattctgtccctccaaacgtat
cctaaaggggggttgaattttccaaatacctttttggcatttggtgagat
atttatgtgggcttatctttcacttttttttcctatggtgcattatgtga
ttgcttatcctggttgtcaacttgactaaacctggaatgcactaccatcc
ataaatacaggaaatacctgtgatcagatctgcggctttaagaaacagct
tacattgtgacatagatgagaacacttttttcagatcttgaggcatagaa
gcatgagatggtagctagtaaggttgtatatgctttatttcagggaacta
gcaagcgaaactcctgaattaagcagctggcagatcaactccaagcagtc
tagtggtgtattacccattatagtgaagagaacatctccag
gaattctcatgtgacctcttaggttcaaaacctgttgtgatgattatgag
aggttaaaatggattctagctcagcatggaggtgagggctcagaagcaca
aacccaaacctgggggtctgactttaaagaacagggttctgtgcccatgg
acacctttcagatggcagggctacttgtttcccattggggtgaattttag
tttttcccatattgtacttatgctaaaaaaaaagtcacaagctaattgat
tcctcatatgtgaatagattaaacatactagtgattaataatgcatctgt
gttgagttaaggaaagaaatgaaagccttttcctcagaggcatttaactg
agtgtgagtacaaagttgaattctctacttcatgttccctgtgcttccat
cctctgtgtgtctgttcagttagtttaaatctgtaacttcctgaaggctg
cttgtatagctctccctttctgtctgccttttgtctccatgtttgtgtct
atctgtgcaatctgttgtctgtttgtatctctctgactggccttaagaga
gagctttggagtgcttctagaacatcaagggaaccatcacatggggaaag
aatgggatagtgaagagtaatcttttataaatgattaggtaactggctcc
aagtggtcaagtggacaagacaacaagcatttataaacatgacttttatc
aaccaatacctataactgtatatgcatttttgaactatgttttaagcctc
tgtatttcatgctttcatcaaatgacactcatgcagattctgagcaggac
ttgaaaaagtacataaattaccattgtatctatgcatcaagttaggtttt
aaaagttgatatcaagagaagtccaaggagaataatgttagtttttacgt
tgttctttgaaagtgtgctaaaccctcaagttgagtaaacagtaggatca
cagctttaaatcttaaattttttcaagttgccttaattctggttgtgagt
caggaaaattcttcatctatacaagtagatgttttatataatacatgtcc
cacgtatggtcttgcatgcatagaagcaccatggagcaaagactcaatgg
agtcctgctgatgtagcttagaaagatgttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146820767_146821904
seq2: B6Ng01-167I20.g_66_1196 (reverse)

seq1  GAACATCTTACTAAGACTACATCCAGCAGGACTCCATGGAGTC-TTGCTC  49
      ||||||||| ||||| |||||| |||||||||||||| ||||| ||||||
seq2  GAACATCTTTCTAAG-CTACAT-CAGCAGGACTCCATTGAGTCTTTGCTC  48

seq1  CATGGTGCTTTCCTATGCATTGGCAGAACTGTACGTGTGACAATGTATTA  99
      ||||||||||  ||||||||  |||  ||  |||||| ||| ||||||||
seq2  CATGGTGCTT--CTATGCAT--GCAAGACCATACGTGGGAC-ATGTATTA  93

seq1  TATAAAACATCTTAACTTGTAATAGATGGGGAATTTTCCTGGACCTCACA  149
      ||||||||||||  |||||| |||||||  |||||||||||   ||||||
seq2  TATAAAACATCT--ACTTGT-ATAGATGAAGAATTTTCCTG--ACTCACA  138

seq1  ACCAGAATTAAGGAAACTTGAAGAAATTTAAGATTTAAAGCTGTGATCCT  199
      ||||||||||||| |||||||| |||||||||||||||||||||||||||
seq2  ACCAGAATTAAGGCAACTTGAAAAAATTTAAGATTTAAAGCTGTGATCCT  188

seq1  ACTGTTTATTCAACTTGAGGGTTTAGTACACTTTTCAAAGAACAACGTAA  249
      |||||||| ||||||||||||||||| |||| ||||||||||||||||||
seq2  ACTGTTTACTCAACTTGAGGGTTTAGCACAC-TTTCAAAGAACAACGTAA  237

seq1  AAACTAACATTATTCTCCTTTGACTTCTCTTGATATCAACTTTTAAAACC  299
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAACTAACATTATTCTCCTTGGACTTCTCTTGATATCAACTTTTAAAACC  287

seq1  TAACTTGATGCATAGATACAATGGTAATTTATGTACTTTTTCAAGTCCTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGATGCATAGATACAATGGTAATTTATGTACTTTTTCAAGTCCTG  337

seq1  CTCAGAAACTGCATGAGTGTCACTTGATGAAAGCATGAAATACAGAGGCT  399
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  CTCAGAATCTGCATGAGTGTCATTTGATGAAAGCATGAAATACAGAGGCT  387

seq1  TAAAACATAGTTCAAAAATGCATATACAGTTATGGGTATTGGTTGATAAA  449
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TAAAACATAGTTCAAAAATGCATATACAGTTATAGGTATTGGTTGATAAA  437

seq1  AGTCATGTTTATAAATGTCTGTTGTCTTGACCACTTGACCACTTGGAGCC  499
      |||||||||||||||||  |||||||||| ||||||||||||||||||||
seq2  AGTCATGTTTATAAATGCTTGTTGTCTTGTCCACTTGACCACTTGGAGCC  487

seq1  AGTTACCTAATCCTTTATAAAATATTACTATTCACTATCCCATTCTTTCC  549
      |||||||||||| ||||||||| |||||| ||||||||||||||||||||
seq2  AGTTACCTAATCATTTATAAAAGATTACTCTTCACTATCCCATTCTTTCC  537

seq1  CCATGTGATGGATCCCTTGATGTTCTAGAAGCACTCCAAAGCTCTCTCTC  599
      ||||||||||| ||||||||||||||||||||||||||||||||||||| 
seq2  CCATGTGATGGTTCCCTTGATGTTCTAGAAGCACTCCAAAGCTCTCTCTT  587

seq1  AAGGCCAGTCAGAGAGATACAAATAGACAACAGATTACAC----AGACAC  645
      ||||||||||||||||||||||| |||||||||||| |||    ||||||
seq2  AAGGCCAGTCAGAGAGATACAAACAGACAACAGATTGCACAGATAGACAC  637

seq1  CAACATGGAGACAAAAGGCAGACAGAAAGGGAGAGCTATACAAGCAGCCT  695
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGAGACAAAAGGCAGACAGAAAGGGAGAGCTATACAAGCAGCCT  687

seq1  TCAGGAAGTTACAGATTTAAACTAACTGAACAGATACACAGAGGATGGAA  745
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCAGGAAGTTACAGATTTAAACTAACTGAACAGACACACAGAGGATGGAA  737

seq1  GCACAGGGAACATGAAGTAGAGAATTCAACTTTGTACTCACACTCAGTTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGGAACATGAAGTAGAGAATTCAACTTTGTACTCACACTCAGTTA  787

seq1  AATGCCTCTGAGGAAAAGGCTTTCATTTCTTTCCTTAACTCAACACAGAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTCTGAGGAAAAGGCTTTCATTTCTTTCCTTAACTCAACACAGAT  837

seq1  GCATTATTAATCACTAGTATGTTTAATCTATTCACATATGAGGAATCAAT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATTAATCACTAGTATGTTTAATCTATTCACATATGAGGAATCAAT  887

seq1  TAGCTTGTGAC-TTTTTTTTAGCATAAGTACAATATGGGAAAAACTAAAA  944
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTGTGACTTTTTTTTTAGCATAAGTACAATATGGGAAAAACTAAAA  937

seq1  TTCACCCCAATGGGAAACAAGTAGCCCTGTCATCTGAAAGGTGTCCATGG  994
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTCACCCCAATGGGAAACAAGTAGCCCTGCCATCTGAAAGGTGTCCATGG  987

seq1  GCACAGAACCCTGTTCTTTAAAGTCAGACCCCCAGGTTTGGGTTTGTGCT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAACCCTGTTCTTTAAAGTCAGACCCCCAGGTTTGGGTTTGTGCT  1037

seq1  TCTGAGCTCTCACCTCCATGCTGAGCTAGAATCCATTTTAACCTCTCATA  1094
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGCCCTCACCTCCATGCTGAGCTAGAATCCATTTTAACCTCTCATA  1087

seq1  ATCATCACAACAGGTTTTGAACCTAAGAGGTCACATGAGAATTC  1138
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCACAACAGGTTTTGAACCTAAGAGGTCACATGAGAATTC  1131