BAC Information

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BAC

Clone NameB6Ng01-168E06
Chromosome4 (Build37)
Map Location 128,930,381 - 128,931,339
singlet/doubletsinglet
Overlap genenone
Upstream geneHmgb4, 4930546G22Rik, Zscan20, Tlr12, Phc2, A3galt2, BC039093, LOC667354, Trim62, Adc, Ak2, Ibrdc3, Tmem54, Hpca, Fndc5, S100pbp, Yars, C77080
Downstream geneSync, Rbbp4, Zbtb8os, 2410081M15Rik, LOC100039588, Zbtb8, Bsdc1, Tssk3, 1700125D06Rik, Marcksl1, Hdac1, Lck, BC030183, Eif3s2, 2510006D16Rik, LOC667452, Iqcc, Ccdc28b, Txlna, Kpna6, Tmem39b, Khdrbs1, LOC100040532, Ptp4a2, LOC622469, LOC622480, 1700003M07Rik, Bai2, Col16a1, Pef1, Hcrtr1, Tinagl, Gm853, Serinc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-168E06.bB6Ng01-168E06.g
ACCDH959547DH959548
length1,1691,076
definitionDH959547|Mus musculus domesticus DNA, BAC clone: B6Ng01-168E06, 5' end.DH959548|Mus musculus domesticus DNA, BAC clone: B6Ng01-168E06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctctgcagaccaggctggtctctgcctcctgagtattggagtt
aaaggcatgtgccaccatacccggctgaaaagctttctcttttaagttgt
ccaggtcggggctggtgagatggctcagtgggttagagcacccgactgct
cttccgaaggtgcagagttcaaatcccagcaaccacatggtggctcacaa
ccatccgtaacaagatctgaccccctcttctggagtgtctgaagacagct
acaatgtacttacatataataaataaataaataaatctttaagttgtcca
ggtcatggtgtttatgacagtagtagaaaagtaactaagacagtcacaca
gcatggttcttggagggcagggcatccaggggcatggaagctttgtgtgc
cttccctgtaacttgccttagctatctctctattctcattcacacccttg
aaaatctttatgataaaccagagaacttgggtgtttcccccagtggcttg
tggggagcttgttttagaaccaggtcagaagttcgagtaaaatgaccttg
tgcttgcaattggcatctggagggagcagtcttggacctaatccctcacc
ctgggggatctgatatcacgaccatgtagatagcatcagagacaccttta
cagccaatggatctgatgctacccaactgctttccttccatagctgccca
gttcctagaagtcttctgtgtcaattggtggctgcaggtacagaaatgga
gctctattcctgtgtgctcagaccatcactaacttttcaagcttgataac
gcttctctgagatcagtaatcctcaggaggttgttatcactaagcagaca
gcgtccctgagacccgatgtctcggcacactaactgccactgtccaattc
taccttcttgacttaaagtctacagcttcgggactggagagatggcttag
aggttaaaagcactgactgatcttccaagggctggagttcattctcagca
accaatggtggctcacaaacatctgtaagaagtctgacgctctcttcgga
tgtgtctgaagaagtggtactctatcactaaaatgaataattcttaaaaa
aaaatattccacacgcttcggtgactatccatccatgtctgtcctctccc
cagatccttttcaaaattc
gaattccctctgtagatgaggctgatccctaactcagccacctgcctctg
cctcctgagtgctaggattaaaggtgtacatcgccaccacccagcactta
cggggtcctcaataattgttttatgtttatttatgtgtatttatccatat
gaatgtatgtacatctgcccagggagcccagagagggtgtcgatgcctgg
aagctacagtcatgtgtgggttgtgagctgtcccttgtgaatgtgtgggt
tgtgagctgtcccttgtgaattcttgaaagtaaactcaggttctctacca
gaacaacactgagccagctctccagccctcgcagctcttgctttttgttt
gattttgtagctcaggctagcctagaacttactttatatcctaggctacc
ctcaatcctcccacttcagcctcctgaatgctggagtcacaaacatgttc
caccatacctgacttccttactttttaattaattttatttatttattgtg
tgtgtgtgtgcgcgtgcaggagtatgcataccatagcgtgtgtggtcaga
atacaactttcagaacttggttttttcttttcacactgtgagttgtagag
acagaacttctcaggcctgctgacccaccttgcctagcccctattatttt
tggagacatagtctcattgtgtagctcaggttatcctcaaacttgtggtc
cccctgcctccacaatcagcctactcccacatttctgatggataaaatcg
ggttaaaaaatactctatatgaatcaattttatttagtaaatcaaaatgc
taggggtagggagttcgttttgggagtaaggagccttcctgttaaaggat
gcagatctgagccctggattctccagaacccacgtgagccagatacagtt
gtagagagtctggaagctacagagaaaggcaatagagacaggggaatcca
cagagatcttgagcagacagccttggcaagatgcatttggtgagaagaga
ctctgcctcgacaggtaagggcaaggatgacttttgaagctgtgcttggc
tcccagaggtgcagggtactatgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_128930381_128931339
seq2: B6Ng01-168E06.g_195_1143

seq1  TATTTATGTGTATTTATCCATATGAATGTATGTACATCTGCCCAGGGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGTGTATTTATCCATATGAATGTATGTACATCTGCCCAGGGAGC  50

seq1  CCAGAGAGGGTGTCGATGCCTGGAAGCTACAGTCATGTGTGGGTTGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGAGGGTGTCGATGCCTGGAAGCTACAGTCATGTGTGGGTTGTGAG  100

seq1  CTGTCCCTTGTGAATGTGTGGGTTGTGAGCTGTCCCTTGTGAATTCTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCTTGTGAATGTGTGGGTTGTGAGCTGTCCCTTGTGAATTCTTGA  150

seq1  AAGTAAACTCAGGTTCTCTACCAGAACAACACTGAGCCAGCTCTCCAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAACTCAGGTTCTCTACCAGAACAACACTGAGCCAGCTCTCCAGCC  200

seq1  CTCGCAGCTCTTGCTTTTTGTTTGATTTTGTAGCTCAGGCTAGCCTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGCAGCTCTTGCTTTTTGTTTGATTTTGTAGCTCAGGCTAGCCTAGAA  250

seq1  CTTACTTTATATCCTAGGCTACCCTCAATCCTCCCACTTCAGCCTCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTATATCCTAGGCTACCCTCAATCCTCCCACTTCAGCCTCCTGA  300

seq1  ATGCTGGAGTCACAAACATGTTCCACCATACCTGACTTCCTTACTTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGGAGTCACAAACATGTTCCACCATACCTGACTTCCTTACTTTTTA  350

seq1  ATTAATTTTATTTATTTATTGTGTGTGTGTGTGCGCGTGCAGGAGTATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTATTTATTTATTGTGTGTGTGTGTGCGCGTGCAGGAGTATGC  400

seq1  ATACCATAGCGTGTGTGGTCAGAATACAACTTTCAGAACTTGGTTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATAGCGTGTGTGGTCAGAATACAACTTTCAGAACTTGGTTTTTTC  450

seq1  TTTTCACACTGTGAGTTGTAGAGACAGAACTTCTCAGGCCTGCTGACCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACACTGTGAGTTGTAGAGACAGAACTTCTCAGGCCTGCTGACCCA  500

seq1  CCTTGCCTAGCCCCTATTATTTTTGGAGACATAGTCTCATTGTGTAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCTAGCCCCTATTATTTTTGGAGACATAGTCTCATTGTGTAGCTC  550

seq1  AGGTTATCCTCAAACTTGTGGTCCCCCTGCCTCCACAATCAGCCTACTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATCCTCAAACTTGTGGTCCCCCTGCCTCCACAATCAGCCTACTCC  600

seq1  CACATTTCTGATGGATAAAATC-GGTTAAAAAATACTCTATATGAATCAA  649
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CACATTTCTGATGGATAAAATCGGGTTAAAAAATACTCTATATGAATCAA  650

seq1  TTTTATTTAGTAAATCAAAATGCTAGGGGTAGGGAGTTCGTTCTGGGAGT  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTTATTTAGTAAATCAAAATGCTAGGGGTAGGGAGTTCGTTTTGGGAGT  700

seq1  AAGGAGCC-TCCTGTACAAGGATGCAGATCTGAG-CCTGGATTCCCCAGA  747
      |||||||| ||||||  ||||||||||||||||| ||||||||| |||||
seq2  AAGGAGCCTTCCTGTTAAAGGATGCAGATCTGAGCCCTGGATTCTCCAGA  750

seq1  ACCCACGTGAAGCCAGATACAG-TGTAGAGAGTCTGGAAGCTACAAGAGA  796
      ||||||||| |||||||||||| ||||||||||||||||||||| |||||
seq2  ACCCACGTG-AGCCAGATACAGTTGTAGAGAGTCTGGAAGCTAC-AGAGA  798

seq1  AAGGGCAATAGAGACAGGGGAATCCACAGAAGATCTTGAGCCAGACAGCC  846
      || |||||||||||||||||||||||||| |||||||||| |||||||||
seq2  AA-GGCAATAGAGACAGGGGAATCCACAG-AGATCTTGAG-CAGACAGCC  845

seq1  TTGGCAAAGATGCATTGGTGGAGAAGAGACCCTGCCTCAGACAAGGTAAA  896
      ||||| |||||||||| |  |||||||||| ||||||| ||| |||| ||
seq2  TTGGC-AAGATGCATTTGGTGAGAAGAGACTCTGCCTC-GAC-AGGT-AA  891

seq1  GGGCAAGGATGACACTTGAGGCTGTGCTTTGGCCTCCACAGAGGTGCCAG  946
      |||||||||||||  |||| |||||||||  | |||| |||||||| |||
seq2  GGGCAAGGATGACTTTTGAAGCTGTGCTT--GGCTCC-CAGAGGTG-CAG  937

seq1  GGTACATATGTGC  959
      ||||| |||||||
seq2  GGTAC-TATGTGC  949