BAC Information

Click to search

BAC

Clone NameB6Ng01-169O14
Chromosome4 (Build37)
Map Location 19,784,727 - 19,785,851
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435772, Cngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik, Wwp1, Slc7a13
Downstream geneAtp6v0d2, LOC667282, Ttpa, LOC667301, EG664800, E130310K16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169O14.bB6Ng01-169O14.g
ACCDH960761DH960762
length1,2211,115
definitionDH960761|Mus musculus domesticus DNA, BAC clone: B6Ng01-169O14, 5' end.DH960762|Mus musculus domesticus DNA, BAC clone: B6Ng01-169O14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctggtctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatccaacgagatgatcatgtggtttttgtcttt
gagtttgtttatatagtggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtactttctacttctatcttgtgaaaaagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactatttataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcagttctgattttgttaat
taggattttgtctctgtgccctctagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttgtcaagctgctagtatgtgctctctccgtttcttca
tggaggcactcagagctatgagttccctctagaaatgctttcatgtgttc
ccaaagtttgggtacgttgtggcttcatttcataaactctaaagtcttgt
ttcttctttattccttctgaccagtatcattggaaagaagttgttcagtt
tcacgtggaggtgcttctgtaattctttggtatgagatcgcttaagccat
ggatcgaagaacatggccattcattgatcgtgagcgtttggaccatattg
gtgcaatctgagaagagtgca
gaattcttgggtaagaaagaagagagggaggtaaagaggaagagaggtag
ggaagggaagagaagagagagacatttccatgtggactcatcttaacctc
atttaggcagaggttaagatcaagaaacaatgttccagaataagctaaaa
gccacattaatgcagcgctgtgaactctgtagcagcagctttatttcagg
gtgaggagtgtttgagccacacacactattttctcagttgcatgctctgc
tcaagcattgaatagtaaaccagatccacacgcctctttgcaaaccaaga
gcttcaaggaagcactttcctaatgaaccagttgaatggctctaattctg
tggtatacataaacagaaaggcctgtgaaacagagtctaagtaataagag
atgagagcattttggatgtgtccttaccacaagtaagtgtgtggtttagc
gtgaattttaggtgtgaattagaaactcaattaattcatttattgcctct
tttcaaccatctctattcatgtactctctagaatctacttaatagccata
gagaaatattccagtagggatactttaaaaaaatcttgttttctttgcta
tataaaataacagaggtttgaagagcaaggtgctaatttcttcagagatc
agaacctttctccatagtctactttgggtaccgggaagttgtctcatctc
atagcagcctctctcttctaagcctcttattgatctatcttccagataga
ttcccctcacttggctaggcagggcctagctgatgaagtccttacaaata
aatacttcaactcttgttggctatgaagcaataaatgcaatcaaactcta
acaaagtaactggttagcacagaaaggaaagctagcttgtgaatcaaagg
aatttgggatgtattgtttctgatttctacagccattagacctaagtcaa
gttattgaattttttggatttacgttcatcatctggtggaagtgacctag
tttgtagagcttgagatatctatccaattgaagtaataatatgttagatt
acccacagcctgaataagtaggtgcctcaaaaaggctttttgttacccac
ttgggcaccttacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_19784727_19785851
seq2: B6Ng01-169O14.g_71_1185 (reverse)

seq1  ATGTAAGGTTGGCCCAAGTGGGT-ACAAATAGCCCTTTTTTGA-GCACCT  48
      |||||||||  |||||||||||| ||||| ||||  ||||||| ||||||
seq2  ATGTAAGGT--GCCCAAGTGGGTAACAAAAAGCC--TTTTTGAGGCACCT  46

seq1  ACTTTATGTCAGGCTGTGTGTTAATCTTAAACATATTATTTAATTTAGAT  98
      || |||| |||||||||| | ||||||  |||||||||||  | ||  ||
seq2  AC-TTAT-TCAGGCTGTG-GGTAATCT--AACATATTATT--ACTTCAAT  89

seq1  TGGATAGATATCTCAAAGCTCTACATACTTAGGTCACTTCCA-CAGATGA  147
      |||||||||||||| |||||||||| || ||||||||||||| |||||||
seq2  TGGATAGATATCTC-AAGCTCTACAAAC-TAGGTCACTTCCACCAGATGA  137

seq1  TGAACGTAAATCCAAAAAATTCAATAACTTGACTTAGGTCTAATGGCTGT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACGTAAATCCAAAAAATTCAATAACTTGACTTAGGTCTAATGGCTGT  187

seq1  AGAAATCAGAAACAATACAT-CCAAATTCCTTTGATTCACAAGCTAGCTT  246
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGAAATCAGAAACAATACATCCCAAATTCCTTTGATTCACAAGCTAGCTT  237

seq1  TCCTTTCTGTGCTAACCAGTTACTTTGTTAGAGTTTGATTGCATTTATTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCCTTTCTGTGCTAACCAGTTACTTTGTTAGAGTTTGATTGCATTTA-TT  286

seq1  GCTTCATAGCCAACAAGAGTTGAAGTATTTATTTGTAAGGACTTCATCAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCATAGCCAACAAGAGTTGAAGTATTTATTTGTAAGGACTTCATCAG  336

seq1  CTAGGCCCTGCCTAGCCAAGTGAGGGGAATCTATCTGGAAGATAGATCAA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGCCCTGCCTAGCCAAGTGAGGGGAATCTATCTGGAAGATAGATCAA  386

seq1  TAAGAGGCTTAGAAGAGAGAGGCTGCTATGAGATGAGACAACTTCCCGGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGCTTAGAAGAGAGAGGCTGCTATGAGATGAGACAACTTCCCGGT  436

seq1  ACCCAAAGTAGACTATGGAGAAAGGTTCTGATCTCTGAAGAAATTAGCAC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAAGTAGACTATGGAGAAAGGTTCTGATCTCTGAAGAAATTAGCAC  486

seq1  CTTGCTCTTCAAACCTCTGTTATTTTATATAGCAAAGAAAACAAGATTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCTTCAAACCTCTGTTATTTTATATAGCAAAGAAAACAAGATTTT  536

seq1  TTTAAAGTATCCCTACTGGAATATTTCTCTATGGCTATTAAGTAGATTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGTATCCCTACTGGAATATTTCTCTATGGCTATTAAGTAGATTCT  586

seq1  AGAGAGTACATGAATAGAGATGGTTGAAAAGAGGCAATAAATGAATTAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTACATGAATAGAGATGGTTGAAAAGAGGCAATAAATGAATTAAT  636

seq1  TGAGTTTCTAATTCACACCTAAAATTCACGCTAAACCACACACTTACTTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTCTAATTCACACCTAAAATTCACGCTAAACCACACACTTACTTG  686

seq1  TGGTAAGGACACATCCAAAATGCTCTCATCTCTTATTACTTAGACTCTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAGGACACATCCAAAATGCTCTCATCTCTTATTACTTAGACTCTGT  736

seq1  TTCACAGGCCTTTCTGTTTATGTATACCACAGAATTAGAGCCATTCAACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGGCCTTTCTGTTTATGTATACCACAGAATTAGAGCCATTCAACT  786

seq1  GGTTCATTAGGAAAGTGCTTCCTTGAAGCTCTTGGTTTGCAAAGAGGCGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATTAGGAAAGTGCTTCCTTGAAGCTCTTGGTTTGCAAAGAGGCGT  836

seq1  GTGGATCTGGTTTACTATTCAATGCTTGAGCAGAGCATGCAACTGAGAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCTGGTTTACTATTCAATGCTTGAGCAGAGCATGCAACTGAGAAA  886

seq1  ATAGTGTGTGTGGCTCAAACACTCCTCACCCTGAAATAAAGCTGCTGCTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTGTGTGGCTCAAACACTCCTCACCCTGAAATAAAGCTGCTGCTA  936

seq1  CAGAGTTCACAGCGCTGCATTAATGTGGCTTTTAGCTTATTCTGGAACAT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTTCACAGCGCTGCATTAATGTGGCTTTTAGCTTATTCTGGAACAT  986

seq1  TGTTTCTTGATCTTAACCTCTGCCTAAATGAGGTTAAGATGAGTCCACAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTTGATCTTAACCTCTGCCTAAATGAGGTTAAGATGAGTCCACAT  1036

seq1  GGAAATGTCTCTCTCTTCTCTTCCCTTCCCTACCTCTCTTCCTCTTTACC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTCTCTCTCTTCTCTTCCCTTCCCTACCTCTCTTCCTCTTTACC  1086

seq1  TCCCTCTCTTCTTTCTTACCCAAGAATTC  1125
      |||||||||||||||||||||||||||||
seq2  TCCCTCTCTTCTTTCTTACCCAAGAATTC  1115