BAC Information

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BAC

Clone NameB6Ng01-170N13
Chromosome4 (Build37)
Map Location 29,756,558 - 29,757,686
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha7, LOC100040907, LOC100040811
Downstream geneLOC665185, LOC619906
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-170N13.bB6Ng01-170N13.g
ACCDH961457DH961458
length1,2591,113
definitionDH961457|Mus musculus domesticus DNA, BAC clone: B6Ng01-170N13, 5' end.DH961458|Mus musculus domesticus DNA, BAC clone: B6Ng01-170N13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattcatggacaaaaaatgtatttggaccaacttcaagagtcttc
atagtctaacagtctcagcgccatgtaaaagtccaaagttccaagtctct
tctgaggttcatggcaagctcttaactgtaagtcactataaaatcaaaat
aacaagtaaatcatatacttccaacagacagtggaataaacatataatac
cattcacatatggaggaaagggagcagagtgaggaaacactggacctaag
catgcagaaaaccatcagggcaaactcctgattttagatctccatgtcaa
gtttgatgactgcgacacacttttcttacttggactgctttcacacccag
tctgtagctttctttctcaggtaactcactattctgaattctccaacatt
ttaggagtctcagagaccatactggcttctctatacagcttcatgaaatt
ctgtctccaagcatccatgcaaagacaaccctgtacatgcctggcctcag
gggttttcttcagagggaaaattaataacccctttcctgtattcttgact
ctaaagcctgaagcatatggccaaatctgccgagttctactacatgatag
ggatataacttgcctctattgttcaattatattttcatcatctttttgtt
gttgatggttttcttcacatcttaacgttttgtttaactcttttacacaa
gatgaaagcttatctagatagaatctttccctcagattaccaagaccttt
attcaatttagcatcacgctttctcttaaagtttatatatcctggagaag
tagacttgacaccactatactttctgatgatccttttcgtctcaactgca
cattttgtatttctttgtctgacttgttctttttcattacagatctgcat
aagaatgatctccaataaccacaggacagaaccatactagctgtcctgaa
atctcctctgtcaaagccattagtctaaagtcttcaactgagcttcaaga
agatttcatggagaggacaggataaaaatcagccatagcttttgccaaat
tgtgagtaaagtcaccaccaggttatgttaacctcgaaactgtggtcaat
atcctgctagcatactatagattcccacttaaagcataactgcctctaca
aaggtccgaattatctctcttacatgatggtcactctagaaatctgtcgc
atttgtcatatacgttctatgctgtgacctgagtgagaatccttcaggaa
aaatgtcca
gaattctaattgtcaacatattcaaaatatgtgtttcacaggatgctatt
acctattttgaaatattatttttaaatcagcacattttcttagtttgtta
ttaagttttggagatgatatttaatgattcctggtggacttttttcagtt
gcaaaggttcccaagggaaacagtttctactcagtcttaaaccaccttta
attcaaagaatgaaaataaaacctcaaattaatgaatatagcagacaaaa
tttggaagtgctgaagcagatttttacatggcagaaataaattgaattcc
tggtaaataaaaaagtaatcctttatttttttttcaaattgctatgggga
cttttaaatttgaaaagccaaatgtagtttactcttgtgagcagcaaggc
aataattactcatactatcaatagatgctaaaataaattctatcggtgag
aaatacactcattttctaattgcaactttttgaggtactatactcctcaa
gaagacttagataacttccctaaccaaaattccagatcaccctgtccttg
agatgtgcatgactcaatcagaagtaataatttgcctccatactaaatct
tcaggtctgccatcgaaagagttagcattagcttcatgttttcatcatga
aattgaaatgaacttaatgtgaagcacccagagcagttagcagcctgaac
agatatcctctagaaaaaagtttccttagacagaaatcagacagtcctat
gaaaatcaggctcctcctgcaagcacactcttccctcagaagactttata
agagactacatagaaaataaaacggtaccctgggcaggggcaaggcacaa
aataatttccctctactaagcccctttcatgtaatcattcttcacaaatg
ctgctggttacccttccatgtagcttttatatgagcatatgggttcatag
aattttctgagtgtgagtacttgctgtaggttgttgaatacctgtttcag
gcaaagttatttcttctttaaatagcgcatgatttatgtctcaaagcttc
acaataactttggactcataattgtcagtgccccatcttggtgaaaaatt
ctgaatttgatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_29756558_29757686
seq2: B6Ng01-170N13.g_73_1185 (reverse)

seq1  TAATCAAATATCAAGGAATATTTTCA-CAAGATTGGAGGCACTGACAATG  49
      ||||||||| |||  |||| |||||| ||||||  | |||||||||||  
seq2  TAATCAAAT-TCA--GAAT-TTTTCACCAAGAT--GGGGCACTGACAA--  42

seq1  TAATGAAGTCCAAAGTATATTGTGGAAGGTTTTGAGACATAAATCATGCG  99
      | ||| |||||||||| |||||||  | | ||||||||||||||||||||
seq2  TTATG-AGTCCAAAGT-TATTGTG--AAGCTTTGAGACATAAATCATGCG  88

seq1  CTAATCTAAAGGAGAAATAACTTTGCCTGGAAACAAGGTATTCAACAACC  149
      || || ||||| |||||||||||||||| ||||| |||||||||||||||
seq2  CT-ATTTAAAGAAGAAATAACTTTGCCT-GAAAC-AGGTATTCAACAACC  135

seq1  TACAGCAAGTACTTCACACTCAGAAAATTCTATGAACCCATATGCTCATA  199
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TACAGCAAGTAC-TCACACTCAGAAAATTCTATGAACCCATATGCTCATA  184

seq1  TAAAAGCTTACATGGAAGGGTAACCAGCAGCATTTGTGAAGAATGATTAC  249
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGC-TACATGGAAGGGTAACCAGCAGCATTTGTGAAGAATGATTAC  233

seq1  ATGAAAGGGGCTTAGTAGAGGGAAATTATTTTGTGCCTTGCCCCTGCCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGGGGCTTAGTAGAGGGAAATTATTTTGTGCCTTGCCCCTGCCCA  283

seq1  GGGTACCGTTTTATTTTCTATGTAGTCTCTTATAAAGTCTTCTGAGGGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACCGTTTTATTTTCTATGTAGTCTCTTATAAAGTCTTCTGAGGGAA  333

seq1  GAGTGTGCTTGCAGGAGGAGCCTGATTTTCATAGGACTGTCTGATTTCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGCTTGCAGGAGGAGCCTGATTTTCATAGGACTGTCTGATTTCTG  383

seq1  TCTAAGGAAACTTTTTTCTAGAGGATATCTGTTCAGGCTGCTAACTGCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGAAACTTTTTTCTAGAGGATATCTGTTCAGGCTGCTAACTGCTC  433

seq1  TGGGTGCTTCACATTAAGTTCATTTCAATTTCATGATGAAAACATGAAGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCTTCACATTAAGTTCATTTCAATTTCATGATGAAAACATGAAGC  483

seq1  TAATGCTAACTCTTTCGATGGCAGACCTGAAGATTTAGTATGGAGGCAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTAACTCTTTCGATGGCAGACCTGAAGATTTAGTATGGAGGCAAA  533

seq1  TTATTACTTCTGATTGAGTCATGCACATCTCAAGGACAGGGTGATCTGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTACTTCTGATTGAGTCATGCACATCTCAAGGACAGGGTGATCTGGA  583

seq1  ATTTTGGTTAGGGAAGTTATCTAAGTCTTCTTGAGGAGTATAGTACCTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTTAGGGAAGTTATCTAAGTCTTCTTGAGGAGTATAGTACCTCA  633

seq1  AAAAGTTGCAATTAGAAAATGAGTGTATTTCTCACCGATAGAATTTATTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGCAATTAGAAAATGAGTGTATTTCTCACCGATAGAATTTATTT  683

seq1  TAGCATCTATTGATAGTATGAGTAATTATTGCCTTGCTGCTCACAAGAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATCTATTGATAGTATGAGTAATTATTGCCTTGCTGCTCACAAGAGT  733

seq1  AAACTACATTTGGCTTTTCAAATTTAAAAGTCCCCATAGCAATTTGAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACATTTGGCTTTTCAAATTTAAAAGTCCCCATAGCAATTTGAAAA  783

seq1  AAAAATAAAGGATTACTTTTTTATTTACCAGGAATTCAATTTATTTCTGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAGGATTACTTTTTTATTTACCAGGAATTCAATTTATTTCTGC  833

seq1  CATGTAAAAATCTGCTTCAGCACTTCCAAATTTTGTCTGCTATATTCATT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAAAATCTGCTTCAGCACTTCCAAATTTTGTCTGCTATATTCATT  883

seq1  AATTTGAGGTTTTATTTTCATTCTTTGAATTAAAGGTGGTTTAAGACTGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGGTTTTATTTTCATTCTTTGAATTAAAGGTGGTTTAAGACTGA  933

seq1  GTAGAAACTGTTTCCCTTGGGAACCTTTGCAACTGAAAAAAGTCCACCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAACTGTTTCCCTTGGGAACCTTTGCAACTGAAAAAAGTCCACCAG  983

seq1  GAATCATTAAATATCATCTCCAAAACTTAATAACAAACTAAGAAAATGTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATTAAATATCATCTCCAAAACTTAATAACAAACTAAGAAAATGTG  1033

seq1  CTGATTTAAAAATAATATTTCAAAATAGGTAATAGCATCCTGTGAAACAC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTAAAAATAATATTTCAAAATAGGTAATAGCATCCTGTGAAACAC  1083

seq1  ATATTTTGAATATGTTGACAATTAGAATTC  1129
      ||||||||||||||||||||||||||||||
seq2  ATATTTTGAATATGTTGACAATTAGAATTC  1113