BAC Information

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BAC

Clone NameB6Ng01-173E04
Chromosome4 (Build37)
Map Location 31,938,361 - 32,041,943
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040891
Downstream geneMap3k7, LOC665218, LOC665228, LOC665232, Bach2, Gja10, Casp8ap2, Mdn1, Lyrm2, Ankrd6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173E04.bB6Ng01-173E04.g
ACCGA001655GA001656
length905997
definitionB6Ng01-173E04.b B6Ng01-173E04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,041,040 - 32,041,943)(31,938,361 - 31,939,353)
sequence
gaattcttcttattctgatcctttagagctaagaaaacgaagtttgtgac
tgtatgcctcttacagagaaaagtcctgcatcaaagctacttcatcaaaa
tgaactttaagaaatataaccctgtgcagaactcaagggggctgctgtgg
ttgttctcatgtgtctgtttctggacagctcagtcctaagtcatgtattt
attccttcagcaggcatcatttgctgtatatacacagtaatagttagcat
acagtagtcttcttaaatatgagttattcagcctggcgctaaaaagaagt
tagcagttacgttttctcagattttctggttttactttaagacagcatcc
ctgatataatgacatgataattgtcatgacttgtctgctctaggagacaa
ccaagtgttcaacatttacgtctgcagattctgtttttatttttatatgt
tggtttgactttctaggccagtatgctggccacatttatatcaacttgac
acaaactgtagccatctgagaggaggaaacctccattgagaaaatgcctc
cgtaaaatcagtctctgtgccagagcatgttcttacttagtgactgatgg
gggagaccccagcctcttgtggcgggtcatcctggactggtggttctggg
ttctataaggaagcaggctgagcaagccatagggagcaagccagcaagca
gcactcctccatggcctctgcatcagctcctgtctccaggttcctgctct
gtttgaattcctgccttgacttccctcagtgatggactgtcatcctgaag
tgtaagctgaaataaaccctttccttacaagttgtcttggccatgttttt
cctttcctttcctttcctttcctttcctttcctttcctttccatttccat
tccat

gaattcatctgcatatgaaggattcagttttcttagaaagttttgttgga
attaaatatctttttttcttttaatctgtttctgttacatcttgggaaga
tctttgatcatctcaaagtttctaatagtgtagaattcccacacaatata
ggcagaatgagtatggacttcaaatctgcacataatgcaggtgtgtggct
ctagttatatatatatatacatacacattccatgcaaaacctcacacagc
actctagccattttggttgatttcctatggccattttctgtgcattttag
cagagagatgaaaaagagaactaggaaagaggaagatgtcaggttgatct
actattttaccctaactgaatgcttgctccatctgtcaatcacccagatc
ttttggtgactcacaaaccagcccatttagccaagaccctgctaagacag
atccacatggcgatccttatatgtctacctcctaggaacctaaagtccta
ttcagatgatgtctttgtctgctccactgagcccacttgtttggtaccct
gaatctcaccgaatagttactgccactctccggctcccaagtcagaaaca
tagaacaccccgaacttgtgcctttcgttcactctcctcccttcctttcc
ccaacatcaaaaacaaacaaccgagagcagaaaaagactatcaaatctta
aacacactagttctttataaaccccagatcagttttcacactcacagcct
ggagttcagcaatgttcttcttgcctctggtccaaactctttgcccaggc
tgtcagagccctgcatggcccagctccagttgacctttcgtgcctgattg
tcactcaccaacatgttccagccattggcctttctagtccttgaacacaa
tgacttgatctactccttacttcaatataaacttttgaacacctctataa
aaatcaatgttttccttgattttacagaaaaatgggggggttggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_32041040_32041943
seq2: B6Ng01-173E04.b_31_935 (reverse)

seq1  AAGGAAAGGAAA-GGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG  49
      | |||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGGAATGGAAATGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG  50

seq1  AAAGGAAAAACATGGCCAAGACAACTTGTAAGGAAAGGGTTTATTTCAGC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAAACATGGCCAAGACAACTTGTAAGGAAAGGGTTTATTTCAGC  100

seq1  TTACACTTCAGGATGACAGTCCATCACTGAGGGAAGTCAAGGCAGGAATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTTCAGGATGACAGTCCATCACTGAGGGAAGTCAAGGCAGGAATT  150

seq1  CAAACAGAGCAGGAACCTGGAGACAGGAGCTGATGCAGAGGCCATGGAGG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGAGCAGGAACCTGGAGACAGGAGCTGATGCAGAGGCCATGGAGG  200

seq1  AGTGCTGCTTGCTGGCTTGCTCCCTATGGCTTGCTCAGCCTGCTTCCTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGCTTGCTGGCTTGCTCCCTATGGCTTGCTCAGCCTGCTTCCTTA  250

seq1  TAGAACCCAGAACCACCAGTCCAGGATGACCCGCCACAAGAGGCTGGGGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCCAGAACCACCAGTCCAGGATGACCCGCCACAAGAGGCTGGGGT  300

seq1  CTCCCCCATCAGTCACTAAGTAAGAACATGCTCTGGCACAGAGACTGATT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCATCAGTCACTAAGTAAGAACATGCTCTGGCACAGAGACTGATT  350

seq1  TTACGGAGGCATTTTCTCAATGGAGGTTTCCTCCTCTCAGATGGCTACAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGGAGGCATTTTCTCAATGGAGGTTTCCTCCTCTCAGATGGCTACAG  400

seq1  TTTGTGTCAAGTTGATATAAATGTGGCCAGCATACTGGCCTAGAAAGTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTCAAGTTGATATAAATGTGGCCAGCATACTGGCCTAGAAAGTCA  450

seq1  AACCAACATATAAAAATAAAAACAGAATCTGCAGACGTAAATGTTGAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACATATAAAAATAAAAACAGAATCTGCAGACGTAAATGTTGAACA  500

seq1  CTTGGTTGTCTCCTAGAGCAGACAAGTCATGACAATTATCATGTCATTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTGTCTCCTAGAGCAGACAAGTCATGACAATTATCATGTCATTAT  550

seq1  ATCAGGGATGCTGTCTTAAAGTAAAACCAGAAAATCTGAGAAAACGTAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGATGCTGTCTTAAAGTAAAACCAGAAAATCTGAGAAAACGTAAC  600

seq1  TGCTAACTTCTTTTTAGCGCCAGGCTGAATAACTCATATTTAAGAAGACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAACTTCTTTTTAGCGCCAGGCTGAATAACTCATATTTAAGAAGACT  650

seq1  ACTGTATGCTAACTATTACTGTGTATATACAGCAAATGATGCCTGCTGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATGCTAACTATTACTGTGTATATACAGCAAATGATGCCTGCTGAA  700

seq1  GGAATAAATACATGACTTAGGACTGAGCTGTCCAGAAACAGACACATGAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAAATACATGACTTAGGACTGAGCTGTCCAGAAACAGACACATGAG  750

seq1  AACAACCACAGCAGCCCCCTTGAGTTCTGCACAGGGTTATATTTCTTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCACAGCAGCCCCCTTGAGTTCTGCACAGGGTTATATTTCTTAAA  800

seq1  GTTCATTTTGATGAAGTAGCTTTGATGCAGGACTTTTCTCTGTAAGAGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTTTGATGAAGTAGCTTTGATGCAGGACTTTTCTCTGTAAGAGGC  850

seq1  ATACAGTCACAAACTTCGTTTTCTTAGCTCTAAAGGATCAGAATAAGAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTCACAAACTTCGTTTTCTTAGCTCTAAAGGATCAGAATAAGAAG  900

seq1  AATTC  904
      |||||
seq2  AATTC  905


seq1: chr4_31938361_31939353
seq2: B6Ng01-173E04.g_67_1063

seq1  GAATTCATCTGCATATGAAGGATTCAGTTTTCTTAGAAAGTTTTGTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGCATATGAAGGATTCAGTTTTCTTAGAAAGTTTTGTTGGA  50

seq1  ATTAAATATCTTTTTTTCTTTTAATCTGTTTCTGTTACATCTTGGGAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATATCTTTTTTTCTTTTAATCTGTTTCTGTTACATCTTGGGAAGA  100

seq1  TCTTTGATCATCTCAAAGTTTCTAATAGTGTAGAATTCCCACACAATATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATCATCTCAAAGTTTCTAATAGTGTAGAATTCCCACACAATATA  150

seq1  GGCAGAATGAGTATGGACTTCAAATCTGCACATAATGCAGGTGTGTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAATGAGTATGGACTTCAAATCTGCACATAATGCAGGTGTGTGGCT  200

seq1  CTAGTTATATATATATATACATACACATTCCATGCAAAACCTCACACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTATATATATATATACATACACATTCCATGCAAAACCTCACACAGC  250

seq1  ACTCTAGCCATTTTGGTTGATTTCCTATGGCCATTTTCTGTGCATTTTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGCCATTTTGGTTGATTTCCTATGGCCATTTTCTGTGCATTTTAG  300

seq1  CAGAGAGATGAAAAAGAGAACTAGGAAAGAGGAAGATGTCAGGTTGATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGATGAAAAAGAGAACTAGGAAAGAGGAAGATGTCAGGTTGATCT  350

seq1  ACTATTTTACCCTAACTGAATGCTTGCTCCATCTGTCAATCACCCAGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTTACCCTAACTGAATGCTTGCTCCATCTGTCAATCACCCAGATC  400

seq1  TTTTGGTGACTCACAAACCAGCCCATTTAGCCAAGACCCTGCTAAGACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTGACTCACAAACCAGCCCATTTAGCCAAGACCCTGCTAAGACAG  450

seq1  ATCCACATGGCGATCCTTATATGTCTACCTCCTAGGAACCTAAAGTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACATGGCGATCCTTATATGTCTACCTCCTAGGAACCTAAAGTCCTA  500

seq1  TTCAGATGATGTCTTTGTCTGCTCCACTGAGCCCACTTGTTTGGTACCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATGATGTCTTTGTCTGCTCCACTGAGCCCACTTGTTTGGTACCCT  550

seq1  GAATCTCACCGAATAGTTACTGCCACTCTCCGGCTCCCAAGTCAGAAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCACCGAATAGTTACTGCCACTCTCCGGCTCCCAAGTCAGAAACA  600

seq1  TAGAACACCCCGAACTTGTGCCTTTCGTTCACTCTCCTCCCTTCCTTTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACACCCCGAACTTGTGCCTTTCGTTCACTCTCCTCCCTTCCTTTCC  650

seq1  CCAACATCAAAAACAAACAACCGAGAGCAGAAAAAGACTATCAAATCTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATCAAAAACAAACAACCGAGAGCAGAAAAAGACTATCAAATCTTA  700

seq1  AACACACTAGTTCTTTATAAACCCCAGATCAGTTTTCACACTCACAGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACTAGTTCTTTATAAACCCCAGATCAGTTTTCACACTCACAGCCT  750

seq1  GGAGTTCAGCAATGTTCTTCTTGCCTCTGGTCCAAACTCTTTGCCCAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTCAGCAATGTTCTTCTTGCCTCTGGTCCAAACTCTTTGCCCAGGC  800

seq1  TGTCAGAGCCCTGCATGGCCCAGCTCCAGTTGACCTTTCGTGCCTGATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGAGCCCTGCATGGCCCAGCTCCAGTTGACCTTTCGTGCCTGATTG  850

seq1  TCACTCACCAACATGTTCCAGCCATTGGCCTTTCTAGTCCTTGAACACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCACCAACATGTTCCAGCCATTGGCCTTTCTAGTCCTTGAACACAA  900

seq1  TGACTTGATCTACTCCTTACTTCAATATAAACTTTTGAACACCTCTATAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGATCTACTCCTTACTTCAATATAAACTTTTGAACACCTCTATAA  950

seq1  AAATCAATGTTTTCC-TGATTTTACAG-AAAATGGGGGG--TGGGGG  993
      ||||||||||||||| ||||||||||| |||||||||||  ||||||
seq2  AAATCAATGTTTTCCTTGATTTTACAGAAAAATGGGGGGGTTGGGGG  997


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