BAC Information

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BAC

Clone NameB6Ng01-173G05
Chromosome4 (Build37)
Map Location 146,883,740 - 146,884,897
singlet/doubletsinglet
Overlap geneOTTMUSG00000010671
Upstream geneRex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701
Downstream geneLOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-173G05.bB6Ng01-173G05.g
ACCGA001746GA001747
length1,1491,231
definitionB6Ng01-173G05.b B6Ng01-173G05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacggccacatccttgaaggttaacagaccctgtaatggaaaac
tacctatttgatatgggacaaaaatgctttgcaatattcaaaaacaagaa
gtaattaagatatcctttttgtggctgctcttccgaaggtcctgagttca
aaatcccagcaaccacatggtggctcacaaccatccataatgagatctga
tgtcctcttcttgtgcatctgaagacagctacagtgtacttatatataat
aataaataaatttttaaaaaacatatccttttttattcagattaggaagg
aaaatattgaactacaaatgtttttgaaaagtgttagggagatgtgtctc
tagatacaaattgctgctcttctactgacaatctacagaatgacatatta
taatgctcacattttaaaagcttctctaattaaaaagaaagaaaagaaaa
aagaaaaatgaaatgctctcatcttcaagaattttctgtgatttactgag
accttcacagcacatttaacatttgccaccatcactcttttcaaaaattt
tggtgtgcagtttggattgtatactgtcttttaatgtcatgtattatgaa
atttgattcccagcacccatgtggcactaaacagtagattgttaaaccca
gttctttaaactccaatgatctcttctgaacactacggacaggaggaata
catagcacatatgcatacattcaggcaaatgtaagcaacatatatagaag
aaaaaaagaactttaacttcattcaaagaaactttctaaactactaatag
acttccttatattcctttttctctgagaatgcatgatataatttcaaagc
agtaaacatttatagaatataacatgtacttttgatgtctagatgcagta
atgtacctttatgaaatatgggttgataataatcagaatcccagtgtccc
attagatcccagtgtcagttgtgataacaaaaatgctttcaaatttacat
gtcacttgttaaatattaacacctagcttagtcttatgtgcagctgtgtc
tcacaatctgtattgcaacatgtcatttgacaactgaggcctagttcatg
gcgacccctttctaggaacaaacagtaagaattctaaaatgcagaaata
gaattcatcagagaattcatacaggagagaaaccttacaaatgcagtgaa
tgtgacaaatgctttaccaaacaatccaatcttagtattcatcagagaat
tcatacaggagagaaaccttacaaatgcagtgaatgtgacaaatgcttta
cccaacaatcctgtcttagtattcatcagagaattcatacaggagagaaa
ccttacaaatgcagtgaatgtggcaaatgctttactgaaaaaagcagtct
gagaattcatcagagaattcatacaggagagaaaacttacaaatgcagtg
aatgtgacaaatgctttacccgaaaattccatcttggtattcatcagaga
attcatacaggagagaaaccttacaaatgcagtgaatgtgacaaatgctt
tacccaacaatccaatcttactattcatcagagaattcatacaggagaga
aaccttacaaatgccctgaatgtggcaaatgctttactgaaaaaagcagt
ctgagaattcatcagagaattcatacaggagagaaaccttacaaatgcag
tgaatgtggcaaatgctttactgaaaaaagcagtctgagaattcatcaga
gaattcatacaggagagaaaccttacaaatgcaatgaatgtggcaaatgc
tttactgaaaaaagcagtctgagaattcatcagagaattcatacaggaga
gaaaccttacaaatgcagtgaatgtggcaaatgctttactgtaaaaagca
gtctgagaattcatcagagaattcatacaggagagaaaccttacaaatgc
agtgaatgtgacaaatgctttaccaaacaatccaatcttagtattcatca
gagaattcatacaggaaagaaaccttacaaatgcagtgaatgtgaaaaat
gcttttcccgaaaattacattcttggtattcatcagagaattccaaacag
gagaagaagactttacaaatgcagtgaatgtgaaaattgcttttcccgaa
aattccattcttggtattcatcaaagaattcatacaggaagaaaccttac
aatagattgtatgtgacaaatacaatacctcacatgttcagtctttagag
tcatcagttttcctccgtaagagaatcttttataaattgagtaatgagcc
attcttgacagatattattcctgaattcatatgagaaatccttaggacag
agacacaacctcttttccaaaatacatattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146883740_146884897
seq2: B6Ng01-173G05.b_45_1193 (reverse)

seq1  TATTTCTGCATTTTAGTATTCTACCTGTTTG-TCCTAGAAAGTGTGTCGC  49
      |||||||||||||||| |||||  ||||||| |||||||||| | |||||
seq2  TATTTCTGCATTTTAGAATTCTTACTGTTTGTTCCTAGAAAG-GGGTCGC  49

seq1  ATTGAACTTAGGCCTCAGGTTGTCAAATGGACATGTTGCAATACAGA-TG  98
        ||||| ||||||||| |||||||||| |||||||||||||||||| ||
seq2  CATGAAC-TAGGCCTCA-GTTGTCAAAT-GACATGTTGCAATACAGATTG  96

seq1  TGAGACACAGCTGCACATAAGACTAAGCTA-GTGTTTATATTTAAACAAA  147
      |||||||||||||||||||||||||||||| ||||| ||||||||   ||
seq2  TGAGACACAGCTGCACATAAGACTAAGCTAGGTGTTAATATTTAA--CAA  144

seq1  GTGGACATTGTAAAATTTGAAAGCATATTTTGTTATCACAACTTGACACT  197
      || |||| ||| |||||||||||||| ||||||||||||||| |||||||
seq2  GT-GACA-TGT-AAATTTGAAAGCAT-TTTTGTTATCACAAC-TGACACT  189

seq1  GGGATCTAATGGGACACTGGGATTCTGATTATTATCAACCCATATTTCAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTAATGGGACACTGGGATTCTGATTATTATCAACCCATATTTCAT  239

seq1  AAAGGTACATTACTGCATCTAGACATCAAAAGTACATGTTATATTCTATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTACATTACTGCATCTAGACATCAAAAGTACATGTTATATTCTATA  289

seq1  AATGTTTACTGCTTTTGAAATTATATCATGCATTCTCAGAGAAAAAGGAA  347
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AATGTTTACTGC-TTTGAAATTATATCATGCATTCTCAGAGAAAAAGGAA  338

seq1  TATAAGGAAGTCTATTAGTAGTTTAGAAAGTTTCTTTGAATGAAGTTAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGAAGTCTATTAGTAGTTTAGAAAGTTTCTTTGAATGAAGTTAAA  388

seq1  GTTCTTTTTTTCTTCTATATATGTTGCTTACATTTGCCTGAATGTATGCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTTTTTCTTCTATATATGTTGCTTACATTTGCCTGAATGTATGCA  438

seq1  TATGTGCTATGTATTCCTCCTGTCCGTAGTGTTCAGAAGAGATCATTGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCTATGTATTCCTCCTGTCCGTAGTGTTCAGAAGAGATCATTGGA  488

seq1  GTTTAAAGAACTGGGTTTAACAATCTACTGTTTAGTGCCACATGGGTGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGAACTGGGTTTAACAATCTACTGTTTAGTGCCACATGGGTGCT  538

seq1  GGGAATCAAATTTCATAATACATGACATTAAAAGACAGTATACAATCCAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATCAAATTTCATAATACATGACATTAAAAGACAGTATACAATCCAA  588

seq1  ACTGCACACCAAAATTTTTGAAAAGAGTGATGGTGGCAAATGTTAAATGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCACACCAAAATTTTTGAAAAGAGTGATGGTGGCAAATGTTAAATGT  638

seq1  GCTGTGAAGGTCTCAGTAAATCACAGAAAATTCTTGAAGATGAGAGCATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGAAGGTCTCAGTAAATCACAGAAAATTCTTGAAGATGAGAGCATT  688

seq1  TCATTTTTCTTTTTTCTTTTCTTTCTTTTTAATTAGAGAAGCTTTTAAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTTCTTTTTTCTTTTCTTTCTTTTTAATTAGAGAAGCTTTTAAAA  738

seq1  TGTGAGCATTATAATATGTCATTCTGTAGATTGTCAGTAGAAGAGCAGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCATTATAATATGTCATTCTGTAGATTGTCAGTAGAAGAGCAGCA  788

seq1  ATTTGTATCTAGAGACACATCTCCCTAACACTTTTCAAAAACATTTGTAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTATCTAGAGACACATCTCCCTAACACTTTTCAAAAACATTTGTAG  838

seq1  TTCAATATTTTCCTTCCTAATCTGAATAAAAAAGGATATGTTTTTTAAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATTTTCCTTCCTAATCTGAATAAAAAAGGATATGTTTTTTAAAA  888

seq1  ATTTATTTATTATTATATATAAGTACACTGTAGCTGTCTTCAGATGCACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTATTATATATAAGTACACTGTAGCTGTCTTCAGATGCACA  938

seq1  AGAAGAGGACATCAGATCTCATTATGGATGGTTGTGAGCCACCATGTGGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGACATCAGATCTCATTATGGATGGTTGTGAGCCACCATGTGGT  988

seq1  TGCTGGGATTTTGAACTCAGGACCTTCGGAAGAGCAGCCACAAAAAGGAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTTTGAACTCAGGACCTTCGGAAGAGCAGCCACAAAAAGGAT  1038

seq1  ATCTTAATTACTTCTTGTTTTTGAATATTGCAAAGCATTTTTGTCCCATA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAATTACTTCTTGTTTTTGAATATTGCAAAGCATTTTTGTCCCATA  1088

seq1  TCAAATAGGTAGTTTTCCATTACAGGGTCTGTTAACCTTCAAGGATGTGG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATAGGTAGTTTTCCATTACAGGGTCTGTTAACCTTCAAGGATGTGG  1138

seq1  CCGTGGAATTC  1158
      |||||||||||
seq2  CCGTGGAATTC  1149