BAC Information

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BAC

Clone NameB6Ng01-174F09
Chromosome4 (Build37)
Map Location 149,520,333 - 149,661,318
singlet/doubletdoublet
Overlap geneLOC435818, Car6, LOC100041882, Eno1, LOC666880
Upstream genePgd, Kif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd, Gpr157, Slc2a5
Downstream geneLOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174F09.bB6Ng01-174F09.g
ACCGA002444GA002445
length1,1081,000
definitionB6Ng01-174F09.b B6Ng01-174F09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,520,333 - 149,521,433)(149,660,321 - 149,661,318)
sequence
ttgggaagcgaaggaagaagattaggagttcaaggttatccttggctaca
tagtggattccagcttagcctgggacacttaagaacccacctccaaaatc
caaaaccaatctcctcccctagaaatgacacttgagtgaatccagatgga
aatgtgttcaggggaggtgagtctcgatggggagggttttaagttgtgag
agcagaggtgaaaaggacaggactgtgcaagggttcttctagccccaggg
gacagacagttgcatcatatctgagatcactgtgtgagcggtttgtgtgg
tgactcctgaacaccagtaatatgagtctctctctgccttcacctctctg
ctcactgcaaaaacttctctgaccaagattgaaagcagcactagtatata
agcgtaaacacatttagagggcagtttgaggatatgaacttttaggaaaa
cgataggtttgccccttggcccttacctctgtggcccaaagacacaggtt
ttagggtatcacagatccaaatcacagcaattacaattatttactaatta
cctctagtcattattcctaaatacttaaatttataagtatacttagaaat
aataaggtcatgggctaaggagacggctcagtgggtaaaatgtttgccac
accagcattaggacctgagtttgagttcttataacccatgtgacagctgg
acatggtagcatgggtctgaatcccgttgatcatatgtaacatgtagttt
ctactaccctgctttaaattccagacggaccacactaccagccactaccc
tggtcccttttggaccctgcagacgaaagacacacacacattagcttatt
tttaatatgcttttttagttcatgggccaggcacttctaagcctcctgca
gctaccctgccctttatcttcactcccagctcaacacctttaactctgcc
cctcaacgtagctgcctcagttacctttactgctagctcagccactcctt
aattcttgccctcagctagttgcgtttctatctcccggctgcttagctag
gcccagtcatgtatgcagccaatgccactcccactccacatgactggtgg
cttctctc
gaattccaaaagttgttcctgacctccacgtgtatacacggtgaccacac
aaatgagtacgcatcctgcaatgaccccacacacagtttaataaataaga
taattttggagggagaaagtctctctatgtagcatgaccagcctggaact
cactatgtagaccagactcagagagatcgaactgcctctgcctctatctc
atgggattaaaagcaagtgccaccgcacctgaataaaataatttttaaaa
caatgtcttaagttttattttgtattgacgtgtttggtgctttgcctcct
tgtgtgtctgagcgcagtgttctaagagggtgtgaagaaggtgtcagatt
ccctagatctggagttatagctgttaggaagccaccctgtggaaactgga
aattgaatctgggtcctctggaaaagcatccagtactcttagccactgag
ccatctcttcagcccaaaataaaaaatgtttaaggaatttatgttagcag
ttttatctgacctagttacctaatataaggacataaattatgtcttaatt
acttggcacaccaacaaattatttatataagtcacaattccaggtcaaca
tggaaacacacacctataatctcagcactcagggggccgaagcagacttg
ccaggagtttgagatcattgtgggctaaatagccaaaccctgcctcaaaa
aaaaaaaaaaaaaaaatccaaccaaaactccaagctggcaaatatttggg
tatgcttgagttattttgtagtcagatgttcactgaaatggcacaagcga
tcttagtaatactgtaaggaatatttaaatatacattttctccactttaa
aaaaacactagattcgtgttagacaagctaagcacaactaacatgcttgc
caaaatcacactttaaatagaatatgcaaagcttcactgtggaataacta
ttcaggtcgccaataattaataattacacataattcaaagaaaaaactcc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149520333_149521433
seq2: B6Ng01-174F09.b_64_1171

seq1  TTGGGAAGCGAAGGAAGAAGATTAGGAGTTCAAGGTTATCCTTGGCTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAGCGAAGGAAGAAGATTAGGAGTTCAAGGTTATCCTTGGCTACA  50

seq1  TAGTGGATTCCAGCTTAGCCTGGGACACTTAAGAACCCACCTCCAAAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGATTCCAGCTTAGCCTGGGACACTTAAGAACCCACCTCCAAAATC  100

seq1  CAAAACCAATCTCCTCCCCTAGAAATGACACTTGAGTGAATCCAGATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAATCTCCTCCCCTAGAAATGACACTTGAGTGAATCCAGATGGA  150

seq1  AATGTGTTCAGGGGAGGTGAGTCTCGATGGGGAGGGTTTTAAGTTGTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTTCAGGGGAGGTGAGTCTCGATGGGGAGGGTTTTAAGTTGTGAG  200

seq1  AGCAGAGGTGAAAAGGACAGGACTGTGCAAGGGTTCTTCTAGCCCCAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGGTGAAAAGGACAGGACTGTGCAAGGGTTCTTCTAGCCCCAGGG  250

seq1  GACAGACAGTTGCATCATATCTGAGATCACTGTGTGAGCGGTTTGTGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGTTGCATCATATCTGAGATCACTGTGTGAGCGGTTTGTGTGG  300

seq1  TGACTCCTGAACACCAGTAATATGAGTCTCTCTCTGCCTTCACCTCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCTGAACACCAGTAATATGAGTCTCTCTCTGCCTTCACCTCTCTG  350

seq1  CTCACTGCAAAAACTTCTCTGACCAAGATTGAAAGCAGCACTAGTATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGCAAAAACTTCTCTGACCAAGATTGAAAGCAGCACTAGTATATA  400

seq1  AGCGTAAACACATTTAGAGGGCAGTTTGAGGATATGAACTTTTAGGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTAAACACATTTAGAGGGCAGTTTGAGGATATGAACTTTTAGGAAAA  450

seq1  CGATAGGTTTGCCCCTTGGCCCTTACCTCTGTGGCCCAAAGACACAGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATAGGTTTGCCCCTTGGCCCTTACCTCTGTGGCCCAAAGACACAGGTT  500

seq1  TTAGGGTATCACAGATCCAAATCACAGCAATTACAATTATTTACTAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTATCACAGATCCAAATCACAGCAATTACAATTATTTACTAATTA  550

seq1  CCTCTAGTCATTATTCCTAAATACTTAAATTTATAAGTATACTTAGAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGTCATTATTCCTAAATACTTAAATTTATAAGTATACTTAGAAAT  600

seq1  AATAAGGTCATGGGCTAAGGAGACGGCTCAGTGGGTAAAATGTTTGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGGTCATGGGCTAAGGAGACGGCTCAGTGGGTAAAATGTTTGCCAC  650

seq1  ACCAGCATTAGGACCTGAGTTTGAGTTCTTATAACCCATGTGACAGCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCATTAGGACCTGAGTTTGAGTTCTTATAACCCATGTGACAGCTGG  700

seq1  ACATGGTAGCATGGGTCTGAATCCCGTTGATCATATGTAACATGTAGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTAGCATGGGTCTGAATCCCGTTGATCATATGTAACATGTAGTTT  750

seq1  CTACTACCCTGCTTTAAATTCCAGACGGACCACACTACCAGCCACTACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTACCCTGCTTTAAATTCCAGACGGACCACACTACCAGCCACTACCC  800

seq1  TGGTCCC-TTTGGA-CCTGCAGACGAAAGACACACACACATTAGCTTATT  848
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  TGGTCCCTTTTGGACCCTGCAGACGAAAGACACACACACATTAGCTTATT  850

seq1  TTTAATATGC-TTTTTAGTTCAATGGCCAGGCACTTCTAAGCCTCCTGCA  897
      |||||||||| |||||||||||  ||||||||||||||||||||||||||
seq2  TTTAATATGCTTTTTTAGTTCATGGGCCAGGCACTTCTAAGCCTCCTGCA  900

seq1  GCTAACCTGCCC-TTATCTTCACTCCCAGCTCAACACCTTTAACTCTG-C  945
      |||| ||||||| ||||||||||||||||||||||||||||||||||| |
seq2  GCTACCCTGCCCTTTATCTTCACTCCCAGCTCAACACCTTTAACTCTGCC  950

seq1  CCTCAACGTAGCTG-CTCAGTTACCTTTACTGCTAGCTCAGCAACTC--T  992
      |||||||||||||| ||||||||||||||||||||||||||| ||||  |
seq2  CCTCAACGTAGCTGCCTCAGTTACCTTTACTGCTAGCTCAGCCACTCCTT  1000

seq1  AAATC-TGCCCTCAGCTTAGTTGCGTTTCTAATCTCCCGCCTGCTAAGCT  1041
      || || |||||||||| ||||||||||||| |||||||| ||||| ||||
seq2  AATTCTTGCCCTCAGC-TAGTTGCGTTTCT-ATCTCCCGGCTGCTTAGCT  1048

seq1  AGGCCCAGTCAGGGAGGCAGCCAATGGCCACT-CCACT-CACATGACTGG  1089
      ||||||||||| | | ||||||||| |||||| ||||| |||||||||||
seq2  AGGCCCAGTCATGTATGCAGCCAAT-GCCACTCCCACTCCACATGACTGG  1097

seq1  TGGCTCTCTCTC  1101
      ||||| ||||||
seq2  TGGCT-TCTCTC  1108

seq1: chr4_149660321_149661318
seq2: B6Ng01-174F09.g_68_1067 (reverse)

seq1  GGAGTTTTT--CTTGAATTATGTGTAATTATTAATTATTGGCACCCTG-A  47
      |||||||||   ||||||||||||||||||||||||||||||  |||| |
seq2  GGAGTTTTTTCTTTGAATTATGTGTAATTATTAATTATTGGCGACCTGAA  50

seq1  TAGTTATTCCACAGTTGAAGCTTTGCATATTCTATTT-AAGTGTGATTTT  96
      |||||||||||||| |||||||||||||||||||||| |||||||| |||
seq2  TAGTTATTCCACAG-TGAAGCTTTGCATATTCTATTTAAAGTGTGA-TTT  98

seq1  TGGCAAGCATGTTAGTTTGTGCTTAGCTTGTCTAACACGATTCTAGTGTT  146
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  TGGCAAGCATGTTAG-TTGTGCTTAGCTTGTCTAACACGAATCTAGTGTT  147

seq1  TTTTT-AAGT-GAG-AAATGTATATTTAAATATTCCTTACAGTATTACTA  193
      ||||| |||| ||| |||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAGTGGAGAAAATGTATATTTAAATATTCCTTACAGTATTACTA  197

seq1  AGATCGCTTGTGCCATTTCAGTGAACATCTGACTAC-AAATAACTCAAGC  242
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGATCGCTTGTGCCATTTCAGTGAACATCTGACTACAAAATAACTCAAGC  247

seq1  ATACCCAAATATTTGCCAGCTTGGAGTTTTGGTTGGATTTTTTTTTTTTT  292
      |||||||||||||||||||||||||||||||||||||   ||||||||||
seq2  ATACCCAAATATTTGCCAGCTTGGAGTTTTGGTTGGA---TTTTTTTTTT  294

seq1  TTTTTTTTTTGAGGCAGGGTTTGGCTATTTAGCCCACAATGATCTCAAAC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTGAGGCAGGGTTTGGCTATTTAGCCCACAATGATCTCAAAC  344

seq1  TCCTGGCAAGTCTGCTTCGGCCCCCTGAGTGCTGAGATTATAGGTGTGTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCAAGTCTGCTTCGGCCCCCTGAGTGCTGAGATTATAGGTGTGTG  394

seq1  TTTCCATGTTGACCTGGAATTGTGACTTATATAAATAATTTGTTGGTGTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATGTTGACCTGGAATTGTGACTTATATAAATAATTTGTTGGTGTG  444

seq1  CCAAGTAATTAAGACATAATTTATGTCCTTATATTAGGTAACTAGGTCAG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAATTAAGACATAATTTATGTCCTTATATTAGGTAACTAGGTCAG  494

seq1  ATAAAACTGCTAACATAAATTCCTTAAACATTTTTTATTTTGGGCTGAAG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACTGCTAACATAAATTCCTTAAACATTTTTTATTTTGGGCTGAAG  544

seq1  AGATGGCTCAGTGGCTAAGAGTACTGGATGCTTTTCCAGAGGACCCAGAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCAGTGGCTAAGAGTACTGGATGCTTTTCCAGAGGACCCAGAT  594

seq1  TCAATTTCCAGTTTCCACAGGGTGGCTTCCTAACAGCTATAACTCCAGAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTCCAGTTTCCACAGGGTGGCTTCCTAACAGCTATAACTCCAGAT  644

seq1  CTAGGGAATCTGACACCTTCTTCACACCCTCTTAGAACACTGCGCTCAGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAATCTGACACCTTCTTCACACCCTCTTAGAACACTGCGCTCAGA  694

seq1  CACACAAGGAGGCAAAGCACCAAACACGTCAATACAAAATAAAACTTAAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAGGAGGCAAAGCACCAAACACGTCAATACAAAATAAAACTTAAG  744

seq1  ACATTGTTTTAAAAATTATTTTATTCAGGTGCGGTGGCACTTGCTTTTAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTTTAAAAATTATTTTATTCAGGTGCGGTGGCACTTGCTTTTAA  794

seq1  TCCCATGAGATAGAGGCAGAGGCAGTTCGATCTCTCTGAGTCTGGTCTAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGAGATAGAGGCAGAGGCAGTTCGATCTCTCTGAGTCTGGTCTAC  844

seq1  ATAGTGAGTTCCAGGCTGGTCATGCTACATAGAGAGACTTTCTCCCTCCA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGAGTTCCAGGCTGGTCATGCTACATAGAGAGACTTTCTCCCTCCA  894

seq1  AAATTATCTTATTTATTAAACTGTGTGTGGGGTCATTGCAGGATGCGTAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATCTTATTTATTAAACTGTGTGTGGGGTCATTGCAGGATGCGTAC  944

seq1  TCATTTGTGTGGTCACCGTGTATACACGTGGAGGTCAGGAACAACTTTTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGTGTGGTCACCGTGTATACACGTGGAGGTCAGGAACAACTTTTG  994

seq1  GAATTC  998
      ||||||
seq2  GAATTC  1000