BAC Information

Click to search

BAC

Clone NameB6Ng01-174J02
Chromosome4 (Build37)
Map Location 145,697,319 - 145,697,956
singlet/doubletsinglet
Overlap genenone
Upstream geneVps13d, Tnfrsf1b, Tnfrsf8, LOC666282, 9230115A19Rik, LOC195576, LOC622846, LOC666314, LOC545701, OTTMUSG00000010965, LOC666334, LOC545703, LOC384081, LOC100041379, LOC666349, LOC666351, LOC545704, 1700029I01Rik, LOC236069, LOC384084, LOC666386, LOC666390, LOC100041433
Downstream geneLOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174J02.bB6Ng01-174J02.g
ACCGA002615GA002616
length637655
definitionB6Ng01-174J02.b B6Ng01-174J02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaactttggactcacagttagttaaattacctttgtgggaaaggg
tattgattatttccttaactcagatgcattattaattaccagcgtattta
atctgttcacatatgcagaatccattaacttgtgacataatttttccctc
ttttttttttttgcataagcacaatatgggaaaatataaaactcaccaca
atgggtaacaagtagccctgcattctgaaaggtgtccatgggctcagaac
cctgttctctaaagaaagaccatcaggtctgggcttgtgcttctgagctc
tcacttctatgctggccagaatccattttaactaactctcaccgtcatca
caaagtttttgaacctcagaagtcacaaaagaatcctggaactcattact
ttcatgtaaagagttgacctcatgccatattctctaaggggactttggta
attcttgagtcttcttttcccagcctatgaagatatgcatgggtgtacat
agagtattatagagcacagtcagggaatcttctatgaacaaatggctaaa
tagtgtagtatatactgtaggtctttttctatttccttccttccttcctt
ccttccttccttacttccttcctttccttccttcctt
gaattcacagagatctacctttcactagctccccagaaatggataaagtt
gtataccaccatgcctgcctagttccacttttgataggatttcttaagca
gccctggtaggatttagactcagcatctcactgaggttaatcttgaactt
ctgatcctgctgcctcacttccctaagtgctaggttatagccttctgctg
ccacacagggttttatgaatgcagtggattgaacttgaaagacccacaat
gtgaggactcccccacgctctgactcaggagaggtgacaccccaaaatca
tccacaagaaacggtcttgctgcaaactgcaagaggatttttattcaaga
gcgctctcgggcccacggtcatacaccatgcaggggtagaggaccatggc
gccccgagtagctggataagggggtatttaaaggaaggaaccacaactca
aggaagtgaggagggcattgttggaaaattaccaaagttaccagttaaga
gtcacaaggaagtgcaaagtcacattgttcaggttatctcttaagacaat
ttctaagagcccctaacaatagcacattctttgaattaacactctttgaa
cccaggaagcaggtgggtggagggatgtcgctatcggtttttatgattag
catac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_145697319_145697956
seq2: B6Ng01-174J02.b_45_681 (reverse)

seq1  AAGGAAGGAAGG-AAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGA  49
      |||||||||||| ||||||||||| |||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAAGGAAGGAAGTAAGGAAGGAAGGAAGGAAGGAAGGA  50

seq1  AGGAAATAGAAAAAGACCTACAGTATATACTACACTATTTAGCCATTTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAGAAAAAGACCTACAGTATATACTACACTATTTAGCCATTTGT  100

seq1  TCATAGAAGATTCCCTGACTGTGCTCTATAATACTCTATGTACACCCATG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAAGATTCCCTGACTGTGCTCTATAATACTCTATGTACACCCATG  150

seq1  CATATCTTCATAGGCTGGGAAAAGAAGACTAAAGAATTACCAAAGTCCCC  199
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CATATCTTCATAGGCTGGGAAAAGAAGACTCAAGAATTACCAAAGTCCCC  200

seq1  TTAGAGAATATGGCATGAGGTCAACTCTTTACATGAAAGTAATGAGTTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAATATGGCATGAGGTCAACTCTTTACATGAAAGTAATGAGTTCC  250

seq1  AGGATTCTTTTGTGACTTCTGAGGTTCAAAAACTTTGTGATAACGGTGAG  299
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGGATTCTTTTGTGACTTCTGAGGTTCAAAAACTTTGTGATGACGGTGAG  300

seq1  AGTTCGTTAAAATGGATTCTGGCCAGCATAGAAGTGAGAGCTCAGAAGCA  349
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTTAAAATGGATTCTGGCCAGCATAGAAGTGAGAGCTCAGAAGCA  350

seq1  CAAGCCCAGACCTGATGGTCTTTCTTTAGAGAACAGGGTTCTGAGCCCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCAGACCTGATGGTCTTTCTTTAGAGAACAGGGTTCTGAGCCCAT  400

seq1  GGACACCTTTCAGAATGCAGGGCTACTTGTTACCCATTGTGGTGAGTTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACCTTTCAGAATGCAGGGCTACTTGTTACCCATTGTGGTGAGTTTT  450

seq1  ATATTTTCCCATATTGTGCTTATGCAAAAAAAAAAAAAAGAGAGAAAAAT  499
      |||||||||||||||||||||||||  ||||||||||||||| |||||||
seq2  ATATTTTCCCATATTGTGCTTATGC--AAAAAAAAAAAAGAGGGAAAAAT  498

seq1  TATGTCACAAGTTAATGGATTCTGCATATGTGAACAGATTAAATACGCTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCACAAGTTAATGGATTCTGCATATGTGAACAGATTAAATACGCTG  548

seq1  GTAATTAATAATGCATCTGAGTTAAGGAAAGAATCAATACCCTTTCCCTC  599
      |||||||||||||||||||||||||||||| ||||||||||||||||| |
seq2  GTAATTAATAATGCATCTGAGTTAAGGAAATAATCAATACCCTTTCCCAC  598

seq1  AGAGGTAATTTAACTAACTGTGAGTCCAAAGTTGAATTC  638
      | |||||||||||||||||||||||||||||||||||||
seq2  AAAGGTAATTTAACTAACTGTGAGTCCAAAGTTGAATTC  637