BAC Information

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BAC

Clone NameB6Ng01-174L21
Chromosome4 (Build37)
Map Location 87,159,082 - 87,160,044
singlet/doubletsinglet
Overlap genenone
Upstream gene4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
Downstream geneMllt3, BC057079, Ptplad2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174L21.bB6Ng01-174L21.g
ACCGA002733GA002734
length1,191986
definitionB6Ng01-174L21.b B6Ng01-174L21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgttccccatttttaatagggttatttggttc
tctggagtctaacttcttgagttccttgtatatattagatattagctctc
tatttgatgtagggttggtaaagatcctttcccaatctgttggttgctgt
tttgtcctattggcagtgccctttgccttacaaaagctttgtaattttat
gaggccccatttgtcgattcttgatcttagagcataagccattggtgttc
ttttcaggaaaatttcccctgtgcccatgtgttcaaggctcttcccaact
ttcacctctattagtttcagtgtatctggttttatgtggaggtccttgat
ccacttggacttgagctttgtacaaggatatgagaatgaatcaattcaca
ttcttctgcatgataactgccagttgagctagcaccatttgttgaaaaat
gctgtcttttaccactggatggttttagctcccttgtcaaagatcaagtg
accatcggtatgtggattcatttctgggtcttcgattctattccattgat
ctacctgtctgtcactgtaccagtaccatgccgtttttaccacgattgct
ttgtagtacagcttgaggtcagggatgctgattcccccagaagttctttt
attgttgagaatagttctcactagcctgggtttttagttattcccactga
atttgcaaattgttctttctaactttatgaagaattgagttggaattttg
atggggactgcattgaatctgtagattgcttttggcaagatgaccatttt
tactatattaatcctgccaatccatgagcatgggagatcttcccatcttc
tgaaattttcttcaatttctttcttcagagactggaagttctcatcatac
agatttttaccttgggtattaatttattacttatttaattatatttttaa
atctgtggaaagtccagaagacacttttgggagacttaattcctccccat
ctattcatatgaggacccagaaattaaacctctagtttgttcagccaggt
gcttttatccaattgagcttctcacttagcccacatggggtttttcaatt
tccttctcgtatacaccaccactaaccacaatgtccattaacctctcaac
atacacagatccacggtggaaaatcagttgataaccatact
cggaatttttatattcatacacactgtgcactggttaccacattacattt
attaatgcacccatcatgagtacagttattgtggaagatgcaaagggatg
agaacacttagaatctgctcaaatcacatttcaaataagcagcacagtag
tattaactcaatcactgggctgtatattattaagtccccagaaattaatt
catcttccaatggaaagttgaactcatatgcagacaaaaagatagtgttt
ttcagaggcaggttggtgagaaaaaaatgaggtcatattggcttcctctt
ctccaggatgaagtcacagcccatgcaggtcatgggtttgggtggcttga
tgacttctcatgcaaaatatatttgatggaattttaatttttgatatttt
aaacttacacataattttctcctttctttttcaacagttttaatgtgtct
gtatcttttatgttgtatataaatattttttcatttcccataaacactgg
aataagtctgccaagaacaggaacaattccttggaccgcaaactttgtct
ctcagtatctatagctcaatttagttccccattcagtattacagaggtga
gcagagttttaaaaattattttatgggatatgtttatcttcagggttctg
ataaacatatcagagtatgttcttagagtatggtcagcagacccccagga
gtccatgagatcagattagagtatactcataattctgagatgccattgcc
tcctatggtattgacatttgagttggcccatcccaacatttatttatccc
acctacccaacattttatccccatctatgatctgcctggagcatgtaaag
ggggctgtactgcagatttcaaagctgcaagacttcatgacatagggaaa
aaaacaagattatccaagcaggagtgacagtgagggttctagttattgat
aagtattagccagaaaaccagagggcttcaggaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_87159082_87160044
seq2: B6Ng01-174L21.g_69_1046

seq1  AATTTTTATATTCATACACACTGTGCACTGGTTACCACATTACATTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTATATTCATACACACTGTGCACTGGTTACCACATTACATTTATT  50

seq1  AATGCACCCATCATGAGTACAGTTATTGTGGAAGATGCAAAGGGATGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCACCCATCATGAGTACAGTTATTGTGGAAGATGCAAAGGGATGAGA  100

seq1  ACACTTAGAATCTGCTCAAATCACATTTCAAATAAGCAGCACAGTAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTAGAATCTGCTCAAATCACATTTCAAATAAGCAGCACAGTAGTAT  150

seq1  TAACTCAATCACTGGGCTGTATATTATTAAGTCCCCAGAAATTAATTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCAATCACTGGGCTGTATATTATTAAGTCCCCAGAAATTAATTCAT  200

seq1  CTTCCAATGGAAAGTTGAACTCATATGCAGACAAAAAGATAGTGTTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAATGGAAAGTTGAACTCATATGCAGACAAAAAGATAGTGTTTTTC  250

seq1  AGAGGCAGGTTGGTGAGAAAAAAATGAGGTCATATTGGCTTCCTCTTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGTTGGTGAGAAAAAAATGAGGTCATATTGGCTTCCTCTTCTC  300

seq1  CAGGATGAAGTCACAGCCCATGCAGGTCATGGGTTTGGGTGGCTTGATGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGAAGTCACAGCCCATGCAGGTCATGGGTTTGGGTGGCTTGATGA  350

seq1  CTTCTCATGCAAAATATATTTGATGGAATTTTAATTTTTGATATTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATGCAAAATATATTTGATGGAATTTTAATTTTTGATATTTTAAA  400

seq1  CTTACACATAATTTTCTCCTTTCTTTTTCAACAGTTTTAATGTGTCTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACACATAATTTTCTCCTTTCTTTTTCAACAGTTTTAATGTGTCTGTA  450

seq1  TCTTTTATGTTGTATATAAATATTTTTTCATTTCCCATAAACACTGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTATGTTGTATATAAATATTTTTTCATTTCCCATAAACACTGGAAT  500

seq1  AAGTCTGCCAAGAACAGGAACAATTCCTTGGACCGCAAACTTTGTCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGCCAAGAACAGGAACAATTCCTTGGACCGCAAACTTTGTCTCTC  550

seq1  AGTATCTATAGCTCAATTTAGTTCCCCATTCAGTATTACAGAGGTGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTATAGCTCAATTTAGTTCCCCATTCAGTATTACAGAGGTGAGCA  600

seq1  GAGTTTTAAAAATTATTTTATGGGATATGTTTATCTTCAGGGTTCTGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTAAAAATTATTTTATGGGATATGTTTATCTTCAGGGTTCTGATA  650

seq1  AACATATCAGAGTATGTTCTTAGAGTATGGTCAGCAGACCCCCAGGAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCAGAGTATGTTCTTAGAGTATGGTCAGCAGACCCCCAGGAGTC  700

seq1  CATGAGATCAGATTAGAGTATACTCATAATTCTGAGATGCCATTGCCTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGATCAGATTAGAGTATACTCATAATTCTGAGATGCCATTGCCTCC  750

seq1  TATGGTATTGACATTTGAGTTGGCCCATCCCAACATTTATTTATCCCACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTATTGACATTTGAGTTGGCCCATCCCAACATTTATTTATCCCACC  800

seq1  TACCCAACA-TTTAT-CCCATCTATGATCTG-CTGGAGCATGTAAA-GGG  846
      ||||||||| ||||| ||||||||||||||| |||||||||||||| |||
seq2  TACCCAACATTTTATCCCCATCTATGATCTGCCTGGAGCATGTAAAGGGG  850

seq1  GCTGTACTGCAGA-TTCAAAGCTGCAAGACTTCATGACATAGGG-AAAAA  894
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  GCTGTACTGCAGATTTCAAAGCTGCAAGACTTCATGACATAGGGAAAAAA  900

seq1  ACAAGA-TATCCAAG-AGGAGTGACAGTGAGGG-TCCAG-TATTGAT-AG  939
      |||||| |||||||| ||||||||||||||||| || || ||||||| ||
seq2  ACAAGATTATCCAAGCAGGAGTGACAGTGAGGGTTCTAGTTATTGATAAG  950

seq1  TA-TAG-CAG-AAACCAGA-GGCTTCAG  963
      || ||| ||| |||||||| ||||||||
seq2  TATTAGCCAGAAAACCAGAGGGCTTCAG  978