BAC Information

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BAC

Clone NameB6Ng01-174O09
Chromosome4 (Build37)
Map Location 21,377,885 - 21,378,932
singlet/doubletsinglet
Overlap genenone
Upstream geneE130310K16Rik
Downstream genePrdm13, Ccnc, 2610029I01Rik, Usp45, 4930528A17Rik, 5730406M06Rik, Coq3, 6230409E13Rik, LOC100040379, Fbxl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174O09.bB6Ng01-174O09.g
ACCGA002852GA002853
length1,0541,015
definitionB6Ng01-174O09.b B6Ng01-174O09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatctgaatggccaaaaagcaccttaaaaaattagtcaacatc
cttagtgtttatggaaatgcaaatcaaaaccactctgagattccacctca
caccagtcagaatagctaagaccaaaaactcagttaacagtagatgctgg
tgaggatgtggagaaagaggaacactcctccattgctgatggggctgcaa
ggtggttcaaccagtctagtaatcagtctggtggttcttcagaaaattgg
acatagtactacctgagaacccagctataccactcctggacatataccca
gaagatactccaacttgtaataaggatacatgttccactatgttcatgac
agtgatatttacaataggcagaagcttgaaacaacccagatgtccctcaa
cagagttatggatgcagaaaatgtggtacacttacacaatgtagtactac
tcagctattccttctgatctcctttattattattaatattttaacgcaat
gcttccaataagatatgatgatgccctcagcccctacctgaaaacaagct
gcaggatatttgacagccccagcaatagaatttgagagataattgtattt
tcttggcatctgattttaaacattttaacatcctcatccttggtattgtc
agtcttaaaaggacaggttcatttaaacagaactatgaagtagtaactca
ggtaaataaggaagaaaattatggtggtcaccaatatttcccaaataaaa
catgacttattttgtgtattatattagagaataataaaaaatcttcaaag
ataaaaaaatctttaaaaaatgactttcatgaaattcacaggcaaatgga
tagatctagaaaatatccctcagtgaggaaactcagtaacaaaataacac
acatggtatgtactcactgattaaggcaaagagcttagaattcccatgat
ataactcacagaccacattgaacgctcaagaggaattagatcaaagagtg
gattgcttcaggcctacttagaagggagacaatataattcaagggaagta
cagg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgaaggcttgtacaaccactctggaaatccgtctggcagttcctca
gaaaattggacatagtactaccgaaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagagtaatggatacagaaattgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacataatatgtactcactgataagtggatattagccccaaacc
taggatacccaatatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatttagggatccaccccataatc
agcatccaaacgctgacaccattgcatacacttagcaagattttatcgaa
aggacccagatgtagctgtctcttgttgagacttattgccgggtcctagc
taacacagaaggtggaatgctcaccagtcagcttaattggatggcatcca
cagggcttcccaaatgggaggagcttagaggaaaggtactcaaaggagcc
taaaagggatatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_21377885_21378932
seq2: B6Ng01-174O09.b_49_1100 (reverse)

seq1  TGTACTTCCCTTG-ATTATATTGTCTCCCCTTCTAAGTAGGCCTGAAGC-  48
      ||||||||||||| |||||||||||| |||||||||||||||||||||| 
seq2  TGTACTTCCCTTGAATTATATTGTCT-CCCTTCTAAGTAGGCCTGAAGCA  49

seq1  ATCCACTCTTTGGTCTTAATTCCTCTTGAGCGT--CATGTGGTCTGTGAG  96
      |||||||||||| || |||||||||||||||||   ||||||||||||||
seq2  ATCCACTCTTTGATC-TAATTCCTCTTGAGCGTTCAATGTGGTCTGTGAG  98

seq1  TTATATCATGGGAATTCTATGCTCTTTGCCTT-ATCAGTGAGTACATACC  145
      ||||||||||||||||||| |||||||||||| |||||||||||||||||
seq2  TTATATCATGGGAATTCTAAGCTCTTTGCCTTAATCAGTGAGTACATACC  148

seq1  ATGTGTGTTATTTTGTTACTGAGTTTCCTCACTGA-GGATATTTTCTAGA  194
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ATGTGTGTTATTTTGTTACTGAGTTTCCTCACTGAGGGATATTTTCTAGA  198

seq1  TCTATCCATTTGCCTGTGAATTTCATG-AAGTCATTTTTTAAAGATTTTT  243
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCTATCCATTTGCCTGTGAATTTCATGAAAGTCATTTTTTAAAGATTTTT  248

seq1  TTATCTTTGAAGATTTTTTATTATTTCTCTAATATAATACACAAAATAAG  293
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTATCTTTGAAGATTTTTTATTA-TTCTCTAATATAATACACAAAATAAG  297

seq1  TCATGTTTTATTTGGGAAATATTGGTGACCACCATAATTTTCTTCCTTAT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTTTATTTGGGAAATATTGGTGACCACCATAATTTTCTTCCTTAT  347

seq1  TTACCTGAGTTACTACTTCATAGTTCTGTTTAAATGAACCTGTCCTTTTA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGAGTTACTACTTCATAGTTCTGTTTAAATGAACCTGTCCTTTTA  397

seq1  AGACTGACAATACCAAGGATGAGGATGTTAAAATGTTTAAAATCAGATGC  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGACAATACCAAGGATGAGGATGTTAAAATGTTTAAAATCAGATGC  447

seq1  CAAGAAAATACAATTATCTCTCAAATTCTATTGCTGGGGCTGTCAAATAT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAATACAATTATCTCTCAAATTCTATTGCTGGGGCTGTCAAATAT  497

seq1  CCTGCAGCTTGTTTTCAGGTAGGGGCTGAGGGCATCATCATATCTTATTG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGCTTGTTTTCAGGTAGGGGCTGAGGGCATCATCATATCTTATTG  547

seq1  GAAGCATTGCGTTAAAATATTAATAATAATAAAGGAGATCAGAAGGAATA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATTGCGTTAAAATATTAATAATAATAAAGGAGATCAGAAGGAATA  597

seq1  GCTGAGTAGTACTACATTGTGTAAGTGTACCACATTTTCTGCATCCATAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTAGTACTACATTGTGTAAGTGTACCACATTTTCTGCATCCATAA  647

seq1  CTCTGTTGAGGGACATCTGGGTTGTTTCAAGCTTCTGCCTATTGTAAATA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTGAGGGACATCTGGGTTGTTTCAAGCTTCTGCCTATTGTAAATA  697

seq1  TCACTGTCATGAACATAGTGGAACATGTATCCTTATTACAAGTTGGAGTA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTCATGAACATAGTGGAACATGTATCCTTATTACAAGTTGGAGTA  747

seq1  TCTTCTGGGTATATGTCCAGGAGTGGTATAGCTGGGTTCTCAGGTAGTAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGGTATATGTCCAGGAGTGGTATAGCTGGGTTCTCAGGTAGTAC  797

seq1  TATGTCCAATTTTCTGAAGAACCACCAGACTGATTACTAGACTGGTTGAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCAATTTTCTGAAGAACCACCAGACTGATTACTAGACTGGTTGAA  847

seq1  CCACCTTGCAGCCCCATCAGCAATGGAGGAGTGTTCCTCTTTCTCCACAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTGCAGCCCCATCAGCAATGGAGGAGTGTTCCTCTTTCTCCACAT  897

seq1  CCTCACCAGCATCTACTGTTAACTGAGTTTTTGGTCTTAGCTATTCTGAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACCAGCATCTACTGTTAACTGAGTTTTTGGTCTTAGCTATTCTGAC  947

seq1  TGGTGTGAGGTGGAATCTCAGAGTGGTTTTGATTTGCATTTCCATAAACA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGAGGTGGAATCTCAGAGTGGTTTTGATTTGCATTTCCATAAACA  997

seq1  CTAAGGATGTTGACTAATTTTTTAAGGTGCTTTTTGGCCATTCAGATGAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGATGTTGACTAATTTTTTAAGGTGCTTTTTGGCCATTCAGATGAG  1047

seq1  AATTC  1048
      |||||
seq2  AATTC  1052