BAC Information

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BAC

Clone NameB6Ng01-175E13
Chromosome4 (Build37)
Map Location 72,383,494 - 72,384,619
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667649, Tle1
Downstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722, LOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175E13.bB6Ng01-175E13.g
ACCGA003127GA003128
length8081,128
definitionB6Ng01-175E13.b B6Ng01-175E13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagctctgtacttcattttttaattgagttatttgtat
tgatgttatctaagttctttagttctttattagatttagtatatctggtt
ttatattgagatttttaacccatttggacttgagttttgtgcagggggat
aaatagatatctatttgaattcttctacatgcagacattcagttagaaga
gcacaatttgttgaagatgctctctctttttcattgtatgattttggttt
ctttatcaaaacatcaaaatttcctaggtgtgctggtttgtttctggttc
tttaattagattccattgatctacctgtttgtataccaatattatacagt
tcttgttactattgctctgtagtaaagtttgaaataagagaaagtgtctt
ctccataagtccgttaattgttcaggattgctttatctatccatgttttt
ttcatttgaagttgagaattgttgaattgttccttaatgatctgtaaaga
attgtgttagaattttggtgtggattacattgaatctgtaaattgctttt
ggtaatatggacattttcagtgttaatcctactaatccacgagcatggga
tatctttccaactcttatatcttcctaaatttctttcttcaggtacttta
agcttttgtcatatatgtttttaactcatttatttaaaggtacatcaaga
tattttctatttattgaggctattgtgaaggtactatctcctttctcaga
ccatttatcacttatatagatgagagctattgatttgtgtgtgtgtgtgt
gtgtgtgt

gaattctctttcttactttctaagtttccaatgtacttattggcttcccc
atcatgatgtattactaggcatcttacttagaaacctgagtcccattttc
aatttaaagctttaaaatgacacagaattatctcaaaccacaacttaatg
atactctgacaaggaacaaaggcacaggaaacatgctattgattctcaga
acacctaactaagagaggattcttgctcaaacaggcctgtagaaaattac
acttaaaatacttttaaactggtatttccttcagaggcaattatttttta
attaatttcatctgtatgcagatttttctattcctttaagtaataatgtt
gaattcactttatcataagaagttgtccgttttattaaatgtcaaagtag
tctgcctaagaaactgttcatatctttccattttagaatgtggtctcctc
caaatctggggtgaaatcattttctcgtggtcaccatctactctgagctc
gccaatactcaggatgcttgacaattactgataaaggaggcacatatgga
tttagacactttctagtgcagaaggaacaagttaaacaggtagctagttg
gtggtaatcgcgatgaaggagacacaataaagaggtgggctctatgttcc
agggcaccccaagaacaggttattttatgaaaaagaagaaaaattcctga
aatactttcataaaacaaacaaacaaacaaaaaccaacctgtgtttttga
ggtaatggaagacatttacattgcataaaacacagaattgatttgtacaa
cttgggatttgagggaaatgggtatataattgaaatacacaagtaatttg
gttaattgcttaacaatttcccataaagaagattaggggaattccgttta
aaaaggaaattgaagctgtgcttgtaaaggttttcatataaaatggaaaa
atagttcaattttctatgtttcgggaaaggggccaattataagaacattt
ttgcagatcctgggaattgtttgatgttcctcaaatcaatgataggtttt
tagtagtctcaagttacagaaaaaaatagttaaacttcaattaaaacctt
tcctcagctctcttaactcatgatccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_72383494_72384619
seq2: B6Ng01-175E13.g_65_1192 (reverse)

seq1  AGGGATCATGAGGTAAAGGAGGCTGAGGAAAAGGTTTTATATGAAAGTTT  50
      |||||||||||| |||  || ||||||| ||||||||||  ||||   ||
seq2  AGGGATCATGAGTTAAGAGA-GCTGAGG-AAAGGTTTTAATTGAA--GTT  46

seq1  TAACTTATTTTTTTCTGTAACTTGAGACTACTAAAAA-CTATCATTGATT  99
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAAC-TATTTTTTTCTGTAACTTGAGACTACTAAAAACCTATCATTGATT  95

seq1  TGA-GAACATCAAACAATTTCCAAGATCTGC-AAAATGTTCTTATAATTG  147
      ||| ||||||||||||||| ||| ||||||| ||||||||||||||||||
seq2  TGAGGAACATCAAACAATTCCCAGGATCTGCAAAAATGTTCTTATAATTG  145

seq1  GCCC--TTTCCGGAACATAGAAAATTGAACTATTTTTCCATTTTATATGA  195
      ||||  || ||| |||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTTCCCGAAACATAGAAAATTGAACTATTTTTCCATTTTATATGA  195

seq1  AAACCTTTACAAGCACAGCTTCAATTTTCCTTTTTAAACGG-ATTCCCCT  244
      |||||||||||||||||||||||| |||||||||||||||| ||||||||
seq2  AAACCTTTACAAGCACAGCTTCAA-TTTCCTTTTTAAACGGAATTCCCCT  244

seq1  AATCTTCTTTAT-GGAAATTGTTAAGCAATT-ACCAAATTACTTGTGTAT  292
      |||||||||||| |||||||||||||||||| ||||||||||||||||||
seq2  AATCTTCTTTATGGGAAATTGTTAAGCAATTAACCAAATTACTTGTGTAT  294

seq1  TTCAATTATATACCCATTTCCCTCAAATCCCAAGTTGTACAAATCAATTC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTATATACCCATTTCCCTCAAATCCCAAGTTGTACAAATCAATTC  344

seq1  TGTGTTTTATGCAATGTAAATGTCTTCCATTACCTCAAAAACACAGGTTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTATGCAATGTAAATGTCTTCCATTACCTCAAAAACACAGGTTG  394

seq1  GTTTTTGTTTGTTTGTTTGTTTTATGAAAGTATTTCAGGAATTTTTCTTC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTTGTTTGTTTGTTTTATGAAAGTATTTCAGGAATTTTTCTTC  444

seq1  TTTTTCATAAAATAACCTGTTCTTGGGGTGCCCTGGAACATAGAGCCCAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATAAAATAACCTGTTCTTGGGGTGCCCTGGAACATAGAGCCCAC  494

seq1  CTCTTTATTGTGTCTCCTTCATCGCGATTACCACCAACTAGCTACCTGTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTATTGTGTCTCCTTCATCGCGATTACCACCAACTAGCTACCTGTT  544

seq1  TAACTTGTTCCTTCTGCACTAGAAAGTGTCTAAATCCATATGTGCCTCCT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTGTTCCTTCTGCACTAGAAAGTGTCTAAATCCATATGTGCCTCCT  594

seq1  TTATCAGTAATTGTCAAGCATCCTGAGTATTGGCGAGCTCAGAGTAGATG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGTAATTGTCAAGCATCCTGAGTATTGGCGAGCTCAGAGTAGATG  644

seq1  GTGACCACGAGAAAATGATTTCACCCCAGATTTGGAGGAGACCACATTCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCACGAGAAAATGATTTCACCCCAGATTTGGAGGAGACCACATTCT  694

seq1  AAAATGGAAAGATATGAACAGTTTCTTAGGCAGACTACTTTGACATTTAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGAAAGATATGAACAGTTTCTTAGGCAGACTACTTTGACATTTAA  744

seq1  TAAAACGGACAACTTCTTATGATAAAGTGAATTCAACATTATTACTTAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACGGACAACTTCTTATGATAAAGTGAATTCAACATTATTACTTAAA  794

seq1  GGAATAGAAAAATCTGCATACAGATGAAATTAATTAAAAAATAATTGCCT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGAAAAATCTGCATACAGATGAAATTAATTAAAAAATAATTGCCT  844

seq1  CTGAAGGAAATACCAGTTTAAAAGTATTTTAAGTGTAATTTTCTACAGGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAAATACCAGTTTAAAAGTATTTTAAGTGTAATTTTCTACAGGC  894

seq1  CTGTTTGAGCAAGAATCCTCTCTTAGTTAGGTGTTCTGAGAATCAATAGC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGAGCAAGAATCCTCTCTTAGTTAGGTGTTCTGAGAATCAATAGC  944

seq1  ATGTTTCCTGTGCCTTTGTTCCTTGTCAGAGTATCATTAAGTTGTGGTTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCCTGTGCCTTTGTTCCTTGTCAGAGTATCATTAAGTTGTGGTTT  994

seq1  GAGATAATTCTGTGTCATTTTAAAGCTTTAAATTGAAAATGGGACTCAGG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAATTCTGTGTCATTTTAAAGCTTTAAATTGAAAATGGGACTCAGG  1044

seq1  TTTCTAAGTAAGATGCCTAGTAATACATCATGATGGGGAAGCCAATAAGT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGTAAGATGCCTAGTAATACATCATGATGGGGAAGCCAATAAGT  1094

seq1  ACATTGGAAACTTAGAAAGTAAGAAAGAGAATTC  1126
      ||||||||||||||||||||||||||||||||||
seq2  ACATTGGAAACTTAGAAAGTAAGAAAGAGAATTC  1128


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