BAC Information

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BAC

Clone NameB6Ng01-175F21
Chromosome4 (Build37)
Map Location 97,526,557 - 97,680,467
singlet/doubletdoublet
Overlap geneNfia
Upstream geneLOC620883, EG638698
Downstream geneLOC100039459, LOC669426, LOC384106, 0610025J13Rik, Tm2d1, Inadl, L1td1, Ankrd38, LOC100039541, Usp1, Dock7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175F21.bB6Ng01-175F21.g
ACCGA003191GA003192
length1401,026
definitionB6Ng01-175F21.b B6Ng01-175F21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,680,328 - 97,680,467)(97,526,557 - 97,527,564)
sequence
atccatctaggcccccagtgatgtgaaatgcacacagtactctctcattc
tttttactttgtggcatgtgaactccctgcacacatctggaccttgaggt
ttgtgttgttgttgttgttttaatggtgtaggtggtgttg
gaattccacatccaattatgaatcggtgaaaggagcagagagagggtgta
ctatagagtttagaagaattcgatgctcctgtttcatccagcattgggtt
agggagggaagacttgaataagtgaatctgctcctcaggggtccaaaacc
agccaccagcccagaatgtgatgttcactttagaaacctgagaaaaacag
aagcggccttcctgttgtcgtgataccatacagtgaaatggaagagcaga
aagggactggctggtgatggagctcagtggtagagcactttctaggtgct
acccagttatgttctcagcaatggagaaaacaaaacaataaggtttcaaa
aaaaaaaaaagaaggaagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaagaaaagaaaagaaaaagaaaccaaaagcaaac
agaaaacaaaagtcaaaccaaccaacaaacaaaaaaacaaaaacccagca
atccccaaaagagcaataataacaaaaaccacctaccaataagcagataa
atcagggaccagaaattcaggggagtctggttcttagagcaggatggaga
actgagatcttggcttttgctagaccacacgccctgaagctaaagtcatg
ttttaggttgtgacagctgagatccatgagtaaacttttgacaggaccca
accagacatgattcagtctttgagaacgttgtggcatgcggtgggggagg
accctctgcagctctgcagctgcactgtgttattgggtgtgtggcctcct
tcccagctccagttaaatgacttaaaaaaacacactgtaaattttatcac
atttacagaaccaaatcaccaaacattatctgtagtttgctttttaaact
gagattacttgggttctggagtttattatgattttaaagattttgagagg
catagtagggtaaggtgggggggaatatcaattatgagtcggatctctta
gggtacaggcaccggtcttactcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_97680328_97680467
seq2: B6Ng01-175F21.b_51_190 (reverse)

seq1  CAACACCACCTACACCATTAAAACAACAACAACAACACAAACCTCAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACCACCTACACCATTAAAACAACAACAACAACACAAACCTCAAGGT  50

seq1  CCAGATGTGTGCAGGGAGTTCACATGCCACAAAGTAAAAAGAATGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGTGTGCAGGGAGTTCACATGCCACAAAGTAAAAAGAATGAGAGA  100

seq1  GTACTGTGTGCATTTCACATCACTGGGGGCCTAGATGGAT  140
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTGTGCATTTCACATCACTGGGGGCCTAGATGGAT  140

seq1: chr4_97526557_97527564
seq2: B6Ng01-175F21.g_67_1092

seq1  GAATTCCACATCCAATTATGAATCGGTGAAAGGAGCAGAGAGAGGGTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATCCAATTATGAATCGGTGAAAGGAGCAGAGAGAGGGTGTA  50

seq1  CTATAGAGTTTAGAAGAATTCGATGCTCCTGTTTCATCCAGCATTGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAGTTTAGAAGAATTCGATGCTCCTGTTTCATCCAGCATTGGGTT  100

seq1  AGGGAGGGAAGACTTGAATAAGTGAATCTGCTCCTCAGGGGTCCAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGAAGACTTGAATAAGTGAATCTGCTCCTCAGGGGTCCAAAACC  150

seq1  AGCCACCAGCCCAGAATGTGATGTTCACTTTAGAAACCTGAGAAAAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCAGCCCAGAATGTGATGTTCACTTTAGAAACCTGAGAAAAACAG  200

seq1  AAGCGGCCTTCCTGTTGTCGTGATACCATACAGTGAAATGGAAGAGCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGGCCTTCCTGTTGTCGTGATACCATACAGTGAAATGGAAGAGCAGA  250

seq1  AAGGGACTGGCTGGTGATGGAGCTCAGTGGTAGAGCACTTTCTAGGTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGACTGGCTGGTGATGGAGCTCAGTGGTAGAGCACTTTCTAGGTGCT  300

seq1  ACCCAGTTATGTTCTCAGCAATGGAGAAAACAAAACAATAAGGTTTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGTTATGTTCTCAGCAATGGAGAAAACAAAACAATAAGGTTTCAAA  350

seq1  AAAAAAAAAAGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  400

seq1  AAAGAAAGAAAGAAAGAAGAAAAGAAAAGAAAAAGAAACCAAAAGCAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAGAAAAGAAAAGAAAAAGAAACCAAAAGCAAAC  450

seq1  AGAAAACAAAAGTCAAACCAACCAACAAACAAAAAAACAAAAACCCAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACAAAAGTCAAACCAACCAACAAACAAAAAAACAAAAACCCAGCA  500

seq1  ATCCCCAAAAGAGCAATAATAACAAAAACCACCTACCAATAAGCAGATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAAAAGAGCAATAATAACAAAAACCACCTACCAATAAGCAGATAA  550

seq1  ATCAGGGACCAGAAATTCAGGGGAGTCTGGTTCTTAGAGCAGGATGGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGACCAGAAATTCAGGGGAGTCTGGTTCTTAGAGCAGGATGGAGA  600

seq1  ACTGAGATCTTGGCTTTTGCTAGACCACACGCCCTGAAGCTAAAGTCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGATCTTGGCTTTTGCTAGACCACACGCCCTGAAGCTAAAGTCATG  650

seq1  TTTTAGGTTGTGACAGCTGAGATCCATGAGTAAACTTTTGACAGGACCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGTTGTGACAGCTGAGATCCATGAGTAAACTTTTGACAGGACCCA  700

seq1  ACCAGACATGATTCAGTCTTTGAGAACGTTGTGGCATGCGGT-GGGGAGG  749
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACCAGACATGATTCAGTCTTTGAGAACGTTGTGGCATGCGGTGGGGGAGG  750

seq1  ACCCTCTGCAGCTCTGCAGCTGCACTGTGTTATT-GGTGTGTGGCCTCCT  798
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ACCCTCTGCAGCTCTGCAGCTGCACTGTGTTATTGGGTGTGTGGCCTCCT  800

seq1  TCCCAGCTCCAGTTAAATGACTT-AAAAAACACACTGTAAATTTTATCAC  847
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCCCAGCTCCAGTTAAATGACTTAAAAAAACACACTGTAAATTTTATCAC  850

seq1  A-TTACAGAACC-AATCACCAAACATTATCTGTAG-TTGCTTTTTAAACT  894
      | |||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  ATTTACAGAACCAAATCACCAAACATTATCTGTAGTTTGCTTTTTAAACT  900

seq1  GAGATTACTT-GGTTCTGGAGTTTATTATGATTTT-AAGATTTTGAGAGG  942
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  GAGATTACTTGGGTTCTGGAGTTTATTATGATTTTAAAGATTTTGAGAGG  950

seq1  CATAGTAGGGTAA-GTGGGGGG--ATATC-ATTA-GAGCCG--ACTCTTA  985
      ||||||||||||| ||||||||  ||||| |||| ||| ||   ||||||
seq2  CATAGTAGGGTAAGGTGGGGGGGAATATCAATTATGAGTCGGATCTCTTA  1000

seq1  GGGGACA-GCACCGG--CTACTCATG  1008
      ||| ||| |||||||   ||||||||
seq2  GGGTACAGGCACCGGTCTTACTCATG  1026