BAC Information

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BAC

Clone NameB6Ng01-176E10
Chromosome4 (Build37)
Map Location 93,736,667 - 93,737,879
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC620269, LOC384125, Tusc1
Downstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176E10.bB6Ng01-176E10.g
ACCGA003854GA003855
length6351,210
definitionB6Ng01-176E10.b B6Ng01-176E10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgaggtcaatgggagaggtcctcaagggggattctgacatttag
tccttttattctcttttgctttcttcccaagttgggagagaattcggtca
ccaaggactcttggttagttactctaccaccctaccagaagcctaagttg
atatccattccctgaaatcatggactagaaccaataaaactatatgtgga
tagaaataatttttttctctttttaagttaataagctcaggcattgtgtt
agaatgccaggaagctaatacaggaaccatcttggaggctggctctcaca
ttggacaacttaatcatgcttgtgctgtgcgtatgcatgcgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagaaaacaaaccacatg
caactcacaaaactgagaaaaatatagtatatttctgacaataagaaaca
gaaacttaaaattaaaggcttctttttgtggttaaccagctccaaaatct
gttctactgttaagtatagaggatgaaattggagaatgcatgtatctctg
tcaggatgtatcaatggcaactttatacaaaggacttcgtcttgtaccaa
acataaaaatgctgtctacataatttatagattat

gaattctccttttagctataaaatcagcagcaagccatgaaaacagctga
gtttggagcagtaacttaatacacaggaatctttgaccatggtaaaattt
aagtggcaaaagaagtgtgaaaggagttaaaatattagctcaatattatt
ttttaaaatgaggaaaagaaaacagaagagataacagggatacatttact
gtaaacattgtgctatattattctcaatgatgctgtgaagtaattatttc
ctttattcatgtgcataaatggtacctggccttatgctaagtacttagta
ggaattctggtggcaaaaatgttaattaaagatatgatggattctaaaaa
taaaaaagaaaggaaataatatttatccaaagataaagtaagacaaaaag
ttgccttcactatcagtcagattatctgaattcaaaaagaaacaaatgaa
acaaagggagaatatttgcgacactgacatagatgaagggttggaaaata
ttgatggagtggggatcagtgtatgcctagggcaaataatcaagccagtt
agcaagagcactgaaggtatgaagaagcacaaggaactgagctcaaagct
ccagaacctatgtacagccatgtgtgttcagactcacctatcaggtcagt
aatgttggcagaagagacagaaggatcatagctccagcctaactatgagt
ttaatgagagaccttgtattaaatgaataaggtggagagtgataaagcag
acaattgacatcatcttctgactcattatccaaatacacacacacacaat
tagtttttaaaacttaaatagtgcaatgtggatgtataaacataaaccat
tccacgagattccctataaaacaagttgacacaaaaaaacaggactagct
ctttgtctcaaaaccttggggttgggttggaggggcagtgatgatctgca
gctacatgtagcacttctgcactggacacattctgtggttttatttctga
ctgtagtgtagaaataaggaactttcagtaaaacagacctcctcctcaat
ctgatctcttagtcatgtaactcatgtgacatttaggaaatctgaggtat
ctcaaggtcgtggtgttctccataaagcatcctctcattgacttacctga
ttagtgagatattggaatgtccatgtttggtatgggccctcaaataaact
gtgtggcgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93736667_93737879
seq2: B6Ng01-176E10.g_63_1272

seq1  GAATTCTCCTTTTAGCTATAAAATCAGCAGCAAGCCATGAAAACAGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTTTTAGCTATAAAATCAGCAGCAAGCCATGAAAACAGCTGA  50

seq1  GTTTGGAGCAGTAACTTAATACACAGGAATCTTTGACCATGGTAAAATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGAGCAGTAACTTAATACACAGGAATCTTTGACCATGGTAAAATTT  100

seq1  AAGTGGCAAAAGAAGTGTGAAAGGAGTTAAAATATTAGCTCAATATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGCAAAAGAAGTGTGAAAGGAGTTAAAATATTAGCTCAATATTATT  150

seq1  TTTTAAAATGAGGAAAAGAAAACAGAAGAGATAACAGGGATACATTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAATGAGGAAAAGAAAACAGAAGAGATAACAGGGATACATTTACT  200

seq1  GTAAACATTGTGCTATATTATTCTCAATGATGCTGTGAAGTAATTATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACATTGTGCTATATTATTCTCAATGATGCTGTGAAGTAATTATTTC  250

seq1  CTTTATTCATGTGCATAAATGGTACCTGGCCTTATGCTAAGTACTTAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTCATGTGCATAAATGGTACCTGGCCTTATGCTAAGTACTTAGTA  300

seq1  GGAATTCTGGTGGCAAAAATGTTAATTAAAGATATGATGGATTCTAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTGGTGGCAAAAATGTTAATTAAAGATATGATGGATTCTAAAAA  350

seq1  TAAAAAAGAAAGGAAATAATATTTATCCAAAGATAAAGTAAGACAAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGAAAGGAAATAATATTTATCCAAAGATAAAGTAAGACAAAAAG  400

seq1  TTGCCTTCACTATCAGTCAGATTATCTGAATTCAAAAAGAAACAAATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTCACTATCAGTCAGATTATCTGAATTCAAAAAGAAACAAATGAA  450

seq1  ACAAAGGGAGAATATTTGCGACACTGACATAGATGAAGGGTTGGAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGGAGAATATTTGCGACACTGACATAGATGAAGGGTTGGAAAATA  500

seq1  TTGATGGAGTGGGGATCAGTGTATGCCTAGGGCAAATAATCAAGCCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGAGTGGGGATCAGTGTATGCCTAGGGCAAATAATCAAGCCAGTT  550

seq1  AGCAAGAGCACTGAAGGTATGAAGAAGCACAAGGAACTGAGCTCAAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGAGCACTGAAGGTATGAAGAAGCACAAGGAACTGAGCTCAAAGCT  600

seq1  CCAGAACCTATGTACAGCCATGTGTGTTCAGACTCACCTATCAGGTCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACCTATGTACAGCCATGTGTGTTCAGACTCACCTATCAGGTCAGT  650

seq1  AATGTTGGCAGAAGAGACAGAAGGATCATAGCTCCAGCCTAACTATGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGGCAGAAGAGACAGAAGGATCATAGCTCCAGCCTAACTATGAGT  700

seq1  TTAATGAGAGACCTTGTATTAAATGAATAAGGTGGAGAGTGATAAAGCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGAGAGACCTTGTATTAAATGAATAAGGTGGAGAGTGATAAAGCAG  750

seq1  ACAATTGACATCATCTTCTGACTCATTATCCAAATACACACACACACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGACATCATCTTCTGACTCATTATCCAAATACACACACACACAAT  800

seq1  TAGTTTTTAAAACTTAAATAGTGCAATGTGGATGTATAAACATAAACCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTTAAAACTTAAATAGTGCAATGTGGATGTATAAACATAAACCAT  850

seq1  TCCACGAGATTCCCTATAAAACAAGTTGACACAAAAAAACAGGACTAGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGAGATTCCCTATAAAACAAGTTGACACAAAAAAACAGGACTAGCT  900

seq1  CTTTGTCTCCAAAACCTTGGGGTTGGGTTGGAGGGGCAGTGATGATCTGC  950
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCT-CAAAACCTTGGGGTTGGGTTGGAGGGGCAGTGATGATCTGC  949

seq1  AGCTACATGTAGCACTTCTGCACTGGACACATTCTGTGGTTTTATTTCTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACATGTAGCACTTCTGCACTGGACACATTCTGTGGTTTTATTTCTG  999

seq1  ACTGTTAGTGTAGAAATAAGAAACTTTCAAGTAAAACAGACCT-CTCCTC  1049
      |||| ||||||||||||||| ||||||| |||||||||||||| ||||||
seq2  ACTG-TAGTGTAGAAATAAGGAACTTTC-AGTAAAACAGACCTCCTCCTC  1047

seq1  AATCTTGATCTCCTTAGTCATGTAACTCATGTG-CCTTTAGGAAAATCTG  1098
      |||| |||||| ||||||||||||||||||||| | |||||| |||||||
seq2  AATC-TGATCT-CTTAGTCATGTAACTCATGTGACATTTAGG-AAATCTG  1094

seq1  AGGGTATCTC-AGGTCGT-GTGTTCTCCCATAAAACATCCTTCTCATTGA  1146
      | |||||||| ||||||| ||||||| ||||||| ||||| |||||||||
seq2  A-GGTATCTCAAGGTCGTGGTGTTCT-CCATAAAGCATCC-TCTCATTGA  1141

seq1  GCTTTACTGGAATTAAGTGAGATATT-GAATGT-CATGTTTGGT-TATGC  1193
       |||  |||  ||| ||||||||||| |||||| |||||||||| |  ||
seq2  -CTTACCTG--ATT-AGTGAGATATTGGAATGTCCATGTTTGGTATGGGC  1187

seq1  GCTC-AATAAAC--TTTGGCGCT  1213
       ||| |||||||  | |||||||
seq2  CCTCAAATAAACTGTGTGGCGCT  1210


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