BAC Information

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BAC

Clone NameB6Ng01-177F15
Chromosome4 (Build37)
Map Location 15,827,409 - 16,030,131
singlet/doubletdoublet
Overlap geneCalb1, Decr1, Nbn, Osgin2
Upstream geneTmem55a, OTTMUSG00000004551, Efcbp1, Tmem64, LOC100040095, LOC633695
Downstream geneRipk2, LOC667150, LOC383994, LOC100040154, LOC667212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177F15.bB6Ng01-177F15.g
ACCGA004647GA004648
length1,067977
definitionB6Ng01-177F15.b B6Ng01-177F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(16,029,072 - 16,030,131)(15,827,409 - 15,828,389)
sequence
gaattcactgatagttttctacatattttctatatacgtattatcatcat
gggcccagtgttgccattgtctgtataatttatcaatgtcttaaacagcc
ttaagtccatttcatttcactttagatagtgctaaagtaaactgtaggtt
ctcaataacttttgtttggttttggttttggttttggttttcaagacatg
gcttcttatgttgccctggctgtgttagaactctgagatttgcctgcttc
tgccatcagagtgctgggattcaaggcatatgcccccactctcagttctc
tcaataactttctaatatatctgtttccctgtcttctcctcctctctcag
aaacttagcaataacatacttagctatgttcaatgcccacatcctattat
tacactggccacatcctgtactaacaaattgaacttattaattatcatat
tatggggcaggaggggagactagacattgtcaaagctgagcaaagagaaa
acaatagcttctggtttcagtatttatcataatcagcggccatacacctt
gatgacttctcatttttatcaaagcatttcaggaatttcaaatggttaaa
tggggacttttttactctaccatttttgcctttgactagttctgcctgaa
cacaacccacactgaatggcttagccttctgggatgtgagaaagcatgca
acggccctatcacatcacacgcctcacatggctgtcagtcaggataatca
cataaccacatactactgtgggaaagtgctgacaggaccaacaggaaggg
cagggagccacatgatgagcaccgagaagcaggctgagcacaccacgttt
aactcacactgtgtttgcatgccgcacttttcccagtgtgcccatggtca
ctttcctaactgagcatgacactgcttctgcagtttgcttagaataacag
tgagcaggcagaaagctttcagaggacaaaagacgattattaaggagatg
ggctggcttgcatgattgatttaagctgctgtttctactttagaatcatg
aaatagcaagtgatggg
gaattcttagaccatctcaaacttttctttttgctttagaaaggactctc
taaacctctatgcactatctttaacatggcctttttctcaaaaatatttt
aagatgctacatttggcacatttagtattagcattaccttcattatggca
atatttactgctttctaaaaatgtgaatgtttcccaaatatgtctgagtg
catctcagtatgtgatatttaagtacaatagtgagttaggaaatattgtt
aagcttctagtacccagtggaagctaaataatttgagattgttcaaaata
acttagtcttgttatccacttactgcttttttttttttaattttgtgctt
taaaataaaaaaataaaataaaaaaacaggctggaaacgtagttcagtat
taaagagcttacattgcaggcactcaagatgtttgatttttgaacgtttg
tctccttcattcaataatttataactcagtgttccaaccaataacaatgc
ctttcagctgaaactatttgattcaaataatgacggaaagctggaactga
cagagatggccaggtaagtttcagaattgcacaaatgttattagaataaa
cagaatttcatctaaaattccaacctattaacatatttttttctctctct
ctcaaaaggttactaccagtgcaggaaaatttccttcttaaattccaggt
agttggcttttctctacagtatataataatatctttccctaaaaactcaa
atggtaggatatttgtcaagagaaacaagctgaaatacattatcactatt
tgactgaacttctcttctgactcctagggaatcaaaatgtgtgggaaagg
agttcaataaggcttttgagttatatggatcaggtaaaatgttttcttcc
ttttttctttaaagacttatgagacaatactaacatgaaatctatcctct
ttgtgatttaaggtgtgacatgtatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16029072_16030131
seq2: B6Ng01-177F15.b_47_1113 (reverse)

seq1  CTCATCAC-TGCTA-TTCATGATTCTAAAGTAGAAACAGCAGCTTAAAAT  48
      | |||||| ||||| |||||||||||||||||||||||||||||| ||||
seq2  CCCATCACTTGCTATTTCATGATTCTAAAGTAGAAACAGCAGCTT-AAAT  49

seq1  CAATCATGCAAGCCAGCCCATCTCC-TAAT-ATCGTCTTTTGT-CTCTGA  95
      ||||||||||||||||||||||||| |||| |||||||||||| ||||||
seq2  CAATCATGCAAGCCAGCCCATCTCCTTAATAATCGTCTTTTGTCCTCTGA  99

seq1  AAGCTTTCTGCCTGCTCACTGTTATTCT-AGCAAACTGCAGAAGCAGTGT  144
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AAGCTTTCTGCCTGCTCACTGTTATTCTAAGCAAACTGCAGAAGCAGTGT  149

seq1  CATGCTCAGTTAGGAAAGTGACCATGGGCACACTGGG-AAAGTGCGGCAT  193
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CATGCTCAGTTAGGAAAGTGACCATGGGCACACTGGGAAAAGTGCGGCAT  199

seq1  GCAAACACAGTGTGAGTT-AACGTGGTGTGCTCAGCCTGCTTCTCGGTGC  242
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCAAACACAGTGTGAGTTAAACGTGGTGTGCTCAGCCTGCTTCTCGGTGC  249

seq1  TCATCATGTGGCTCCCTGCCCTTCCTGTTGGTCCTGTCAGCACTTTCCCA  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATGTGGCTCCCTGCCCTTCCTGTTGGTCCTGTCAGCACTTTCCCA  299

seq1  CAGTAGTATGTGGTTATGTGATTATCCTGACTGACAGCCATGTGAGGCGT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTATGTGGTTATGTGATTATCCTGACTGACAGCCATGTGAGGCGT  349

seq1  GTGATGTGATAGGGCCGTTGCATGCTTTCTCACATCCCAGAAGGCTAAGC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTGATAGGGCCGTTGCATGCTTTCTCACATCCCAGAAGGCTAAGC  399

seq1  CATTCAGTGTGGGTTGTGTTCAGGCAGAACTAGTCAAAGGCAAAAATGGT  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTGTGGGTTGTGTTCAGGCAGAACTAGTCAAAGGCAAAAATGGT  449

seq1  AGAGTAAAAAAGTCCCCATTTAACCATTTGAAATTCCTGAAATGCTTTGA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAAAAAGTCCCCATTTAACCATTTGAAATTCCTGAAATGCTTTGA  499

seq1  TAAAAATGAGAAGTCATCAAGGTGTATGGCCGCTGATTATGATAAATACT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATGAGAAGTCATCAAGGTGTATGGCCGCTGATTATGATAAATACT  549

seq1  GAAACCAGAAGCTATTGTTTTCTCTTTGCTCAGCTTTGACAATGTCTAGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAGAAGCTATTGTTTTCTCTTTGCTCAGCTTTGACAATGTCTAGT  599

seq1  CTCCCCTCCTGCCCCATAATATGATAATTAATAAGTTCAATTTGTTAGTA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCCTGCCCCATAATATGATAATTAATAAGTTCAATTTGTTAGTA  649

seq1  CAGGATGTGGCCAGTGTAATAATAGGATGTGGGCATTGAACATAGCTAAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGTGGCCAGTGTAATAATAGGATGTGGGCATTGAACATAGCTAAG  699

seq1  TATGTTATTGCTAAGTTTCTGAGAGAGGAGGAGAAGACAGGGAAACAGAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTATTGCTAAGTTTCTGAGAGAGGAGGAGAAGACAGGGAAACAGAT  749

seq1  ATATTAGAAAGTTATTGAGAGAACTGAGAGTGGGGGCATATGCCTTGAAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGAAAGTTATTGAGAGAACTGAGAGTGGGGGCATATGCCTTGAAT  799

seq1  CCCAGCACTCTGATGGCAGAAGCAGGCAAATCTCAGAGTTCTAACACAGC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACTCTGATGGCAGAAGCAGGCAAATCTCAGAGTTCTAACACAGC  849

seq1  CAGGGCAACATAAGAAGCCATGTCTTGAAAACCAAAACCAAAACCAAAAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCAACATAAGAAGCCATGTCTTGAAAACCAAAACCAAAACCAAAAC  899

seq1  CAAACAAAAGTTATTGAGAACCTACAGTTTACTTTAGCACTATCTAAAGT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAAAGTTATTGAGAACCTACAGTTTACTTTAGCACTATCTAAAGT  949

seq1  GAAATGAAATGGACTTAAGGCTGTTTAAGACATTGATAAATTATACAGAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAATGGACTTAAGGCTGTTTAAGACATTGATAAATTATACAGAC  999

seq1  AATGGCAACACTGGGCCCATGATGATAATACGTATATAGAAAATATGTAG  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAACACTGGGCCCATGATGATAATACGTATATAGAAAATATGTAG  1049

seq1  AAAACTATCAGTGAATTC  1060
      ||||||||||||||||||
seq2  AAAACTATCAGTGAATTC  1067

seq1: chr4_15827409_15828389
seq2: B6Ng01-177F15.g_68_1044

seq1  GAATTCTTAGACCATCTCAAACTTTTCTTTTTGCTTTAGAAAGGACTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGACCATCTCAAACTTTTCTTTTTGCTTTAGAAAGGACTCTC  50

seq1  TAAACCTCTATGCACTATCTTTAACATGGCCTTTTTCTCAAAAATATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTCTATGCACTATCTTTAACATGGCCTTTTTCTCAAAAATATTTT  100

seq1  AAGATGCTACATTTGGCACATTTAGTATTAGCATTACCTTCATTATGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCTACATTTGGCACATTTAGTATTAGCATTACCTTCATTATGGCA  150

seq1  ATATTTACTGCTTTCTAAAAATGTGAATGTTTCCCAAATATGTCTGAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTACTGCTTTCTAAAAATGTGAATGTTTCCCAAATATGTCTGAGTG  200

seq1  CATCTCAGTATGTGATATTTAAGTACAATAGTGAGTTAGGAAATATTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGTATGTGATATTTAAGTACAATAGTGAGTTAGGAAATATTGTT  250

seq1  AAGCTTCTAGTACCCAGTGGAAGCTAAATAATTTGAGATTGTTCAAAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCTAGTACCCAGTGGAAGCTAAATAATTTGAGATTGTTCAAAATA  300

seq1  ACTTAGTCTTGTTATCCACTTACTGCTTTTTTTTTTTTAATTTTGTGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTCTTGTTATCCACTTACTGCTTTTTTTTTTTTAATTTTGTGCTT  350

seq1  TAAAATAAAAAAATAAAATAAAAAAACAGGCTGGAAACGTAGTTCAGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAAAAAATAAAATAAAAAAACAGGCTGGAAACGTAGTTCAGTAT  400

seq1  TAAAGAGCTTACATTGCAGGCACTCAAGATGTTTGATTTTTGAACGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGCTTACATTGCAGGCACTCAAGATGTTTGATTTTTGAACGTTTG  450

seq1  TCTCCTTCATTCAATAATTTATAACTCAGTGTTCCAACCAATAACAATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTCATTCAATAATTTATAACTCAGTGTTCCAACCAATAACAATGC  500

seq1  CTTTCAGCTGAAACTATTTGATTCAAATAATGACGGAAAGCTGGAACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGCTGAAACTATTTGATTCAAATAATGACGGAAAGCTGGAACTGA  550

seq1  CAGAGATGGCCAGGTAAGTTTCAGAATTGCACAAATGTTATTAGAATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATGGCCAGGTAAGTTTCAGAATTGCACAAATGTTATTAGAATAAA  600

seq1  CAGAATTTCATCTAAAATTCCAACCTATTAACATATTTTTTTCTCTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTCATCTAAAATTCCAACCTATTAACATATTTTTTTCTCTCTCT  650

seq1  CTCAAAAGGTTACTACCAGTGCAGGAAAATTTCCTTCTTAAATTCCAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAGGTTACTACCAGTGCAGGAAAATTTCCTTCTTAAATTCCAGGT  700

seq1  AGTTGGCTTTTCTCTACAGTATATAATAATATCTTTCCCTAAAAACTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGCTTTTCTCTACAGTATATAATAATATCTTTCCCTAAAAACTCAA  750

seq1  ATGGTAGGATATTTGTCAAGAGAAACAAGCTGAAATACATTATCACTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAGGATATTTGTCAAGAGAAACAAGCTGAAATACATTATCACTATT  800

seq1  TGACTGAACTTCTCTTCTGACTCCTAGGGAATCAAAATGTGTGGGAAA-G  849
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGACTGAACTTCTCTTCTGACTCCTAGGGAATCAAAATGTGTGGGAAAGG  850

seq1  AGTTCAATAAGGCTTTTGAGTTATAT-GATCAGGTAAAAATGTTTTCTTC  898
      |||||||||||||||||||||||||| |||||||| ||||||||||||| 
seq2  AGTTCAATAAGGCTTTTGAGTTATATGGATCAGGT-AAAATGTTTTCTT-  898

seq1  CCTTTTTTCTTTAAAAAGAACTTATGAGAACAATACTTAACATGAAATCT  948
      |||||||||||||||    ||||||||| ||||||| |||||||||||||
seq2  CCTTTTTTCTTTAAA---GACTTATGAG-ACAATAC-TAACATGAAATCT  943

seq1  ATCCTC-TTGTGATTTTAAGTGTGACATGTATCA  981
      |||||| ||||||||| | |||||||||||||||
seq2  ATCCTCTTTGTGATTTAAGGTGTGACATGTATCA  977