BAC Information

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BAC

Clone NameB6Ng01-177H11
Chromosome4 (Build37)
Map Location 146,722,139 - 146,722,390
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581
Downstream geneEG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177H11.bB6Ng01-177H11.g
ACCGA004729GA004730
length1,021252
definitionB6Ng01-177H11.b B6Ng01-177H11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagatggccattttcagtaaaggatttgtcacattgactacat
ttgtaaggtttctctcctgtatgaattctctgatgaatattaagatggga
tttttgggtaaagcatttgtcacattcactgcatttgtaaggtttatctc
ctgtatgaatcctctgatgaattctcagattgcctttttcagtaaagcat
ttctcacatacaatgcatttgtaaggtttctctcctgtatgaattctctg
atgaatattaagatgagatttttgggtaaagcatttgtcacattcactac
atttgtaaggtttctctcctgtatgaattctctgatgaatattaagatga
aatttgtgggtaaagcatttgtcacattcactgcatttataaattttctc
ttctgcatgaattccctgatggatactaagatggatctgatgggtaaagc
atttgtcacttttactacttctgtaatgtttcttttcatgataaattctc
tgctgactttgaagtttgtctctctgggtaagatatttgtcaaatttact
acatttgtaagggttcactccagtattatttcgtttcaccatgactttat
gtttagaaataaaagccttctcagattctgcatttccgttgtgttttttc
ttctgcatgtggattccctgattgagactaatgatagaaaacaaagttaa
actgtttacagagtcattgtatttgcaaacttttttattgttcctgggct
taagtcttttttggttcgaaaattgaagagcatcagaggtgtgattagtt
ttgtaaggtgtacattggggggcttcaagtatcacattgctaagtttgtc
ccatttagaagacttctcttgaatattcatgtgttcatggacaatgtact
ggctgtcttgatccaagaccttctcatactttccacatatgcaatgattt
tcttgaaaaaagtggggaggcaattagagtgacatgaattacttatataa
aggagtaagtgattcaataat
tgggattaaaggcaaatactgccacgccagaactaaaacattagaaaaag
caggaggtcagaagaaacatgagccctggagtaggaatggatggggtagt
ggcagcattctgctcagcctggtggaactgcatggagtagggtgtgcagg
gaagggtgccagctcttttccttctttttctttctgcagaggtggtttgg
tacccggggtttcatggatggtaggcagtgctgggagtgagtgatgaggt
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146722139_146722390
seq2: B6Ng01-177H11.g_72_323

seq1  TGGGATTAAAGGCAAATACTGCCACACCAGAACTAAAACATTAGAAAAAG  50
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TGGGATTAAAGGCAAATACTGCCACGCCAGAACTAAAACATTAGAAAAAG  50

seq1  CAGGAGGTCAGAAGAAACATGAGCCCTGGAGTAGGAATGGATGGGGTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGGTCAGAAGAAACATGAGCCCTGGAGTAGGAATGGATGGGGTAGT  100

seq1  GGCAGCATTCTGCTCAGCCTGGTGGAACTGCATGGAGTAGGGTGTGCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCATTCTGCTCAGCCTGGTGGAACTGCATGGAGTAGGGTGTGCAGG  150

seq1  GAAGGGTGCCAGCTCTTTTCCTTCTTTTTCTTTCTGCAGAGGTGGTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTGCCAGCTCTTTTCCTTCTTTTTCTTTCTGCAGAGGTGGTTTGG  200

seq1  TACCCGGGGTTTCATGGATGGTAGGCAGTGCTGGGAGTGAGTGATGAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGGGGTTTCATGGATGGTAGGCAGTGCTGGGAGTGAGTGATGAGGT  250

seq1  GG  252
      ||
seq2  GG  252