BAC Information

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BAC

Clone NameB6Ng01-177P07
Chromosome4 (Build37)
Map Location 84,814,617 - 84,815,662
singlet/doubletsinglet
Overlap genenone
Upstream geneBnc2, LOC100040660, LOC624465, LOC100040284, D530005L17Rik, LOC622811
Downstream geneLOC100040303, Sh3gl2, A930009N24, LOC668052
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177P07.bB6Ng01-177P07.g
ACCGA005082GA005083
length1,1471,038
definitionB6Ng01-177P07.b B6Ng01-177P07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggtaaataaatgaaactgcaacaattatgctgatgaggtaac
caagcccagaaagacagatagtgtgggttctctttcttgtgtggatacta
cctttgtaatgtatgcttcattccaaatagccacagaaattagacacctc
ttaaggggcaatggagagagggaaggattttctaaaaaaaaaaggaaaaa
agaaaagaaaagaaaagaaagaaagaaagaaagaaagaaggagaaaaaga
aagaagagaaaaaagaaaagaaagaaagaaagatagaacatggtactata
aaagaggaaaggggtgtataaaaagtatataaaagtgtatataaggggat
ataaaagggggaagtgcaaaagttaaatgcactggaaatgagacagtaaa
aggaggaatatggggaagtataactaacaaatgtcttttgaaagaaccat
agaacttcctaaaataatacacatgcctatacatgataggaggacaaatg
gactcactctataatggggacattacccccaactagataccccatgctaa
caaatagatcctcactgtcaggaatggtcaccaccttcggagtgttatac
atgctcctggagtagaaacgtgttcatcagtcccacccagatgtgagcct
gtgacatgcgatgatgacctgtttagcaacacatgcccactgatgtgatg
tgtgacaaatgttatgggaataatcaaacactttatgactggattttatg
acctattcctcagacagaacccaaacctggcaccataaatggggccaagc
aactgtgcctagataggtgataggtgtaaagaaaggaaatctaccaataa
agctactactaaaatatattactactaaaggtagtctagaagaacatact
actaaattcactcctaatgacttatgctatacccacacatatggtattaa
cacagagacccctcacatgtagatgtacagaaaattagagactatgagtc
atcttaacctaagtagcctaatcaaacccctctcagctcaggatcttgtg
atgaatccaactatttggactggtgttatcttaagataagatggaaggac
ttgatcagatgagagtatctgaggaatctcgcttgagacaactagtg
gaattcccattcccaagatctatcaggtgtgtctagcctgtgaccctgga
ctgcatgcagccagatgcaacggaggctagtgatggatcaggtccaggat
aaatctttaaacttacttaaaatacggagaccttcttttcaagcatgagc
ttcgttttaataataccctgtcacaacgtcaaaggcagtggggccagcct
gcatgggttacacagtgagagtgcatcttcaaattaagaaccaaaaaatt
aaatactggcttaaagaatcttttctcgccgggcggcggtggtgtcacac
acctttaatcccagaacttgggaggcagaggaaggcagatttctgaattc
gaggccagcctggtctacagagtgagttccaggacagccagagctacaca
gaggaaacctgtctcaaaaaaaagaaaaagaaaaagaaaaagaaaaagaa
tcttttctctcttacaacctttacatgtatttgattatctattgcatgca
tgcattctcacagaatagcctgcatgttgaggtcagacaacaacagctga
agtcagttctccccttcccccatgtagatcagtgggatcaaatttaggtt
gctagacttggtggcaagtatctttacctactgagtcatcatgtcagaag
tcgccttgcaccttttaaaagtattcatctttattgagataaaattcata
aaccatttgagttattattttaacacagacagttcagacctttcacataa
caatttctgaaccttcaatgaccttacctcttgtcagtaaggggttatat
gctagctgtcaccgtcctctcctcctgtttatcttgtgtctcctgtctca
ggtctagggatatgaccaacctttctgtttcaacaatctgcttacttctt
ctggaaataagtgcaaatgtataattatctagtgattgtggagtggcttc
tcttggcataaactaacctagcaatttgttaattgtagccatattatgac
tgttcttttattgcagagtaattctaatttggatcgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_84814617_84815662
seq2: B6Ng01-177P07.g_63_1100

seq1  GAATTCCCATTCCCAAGATCTATCAGGTGTGTCTAGCCTGTGACCCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTCCCAAGATCTATCAGGTGTGTCTAGCCTGTGACCCTGGA  50

seq1  CTGCATGCAGCCAGATGCAACGGAGGCTAGTGATGGATCAGGTCCAGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGCAGCCAGATGCAACGGAGGCTAGTGATGGATCAGGTCCAGGAT  100

seq1  AAATCTTTAAACTTACTTAAAATACGGAGACCTTCTTTTCAAGCATGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTAAACTTACTTAAAATACGGAGACCTTCTTTTCAAGCATGAGC  150

seq1  TTCGTTTTAATAATACCCTGTCACAACGTCAAAGGCAGTGGGGCCAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTTTTAATAATACCCTGTCACAACGTCAAAGGCAGTGGGGCCAGCCT  200

seq1  GCATGGGTTACACAGTGAGAGTGCATCTTCAAATTAAGAACCAAAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGGTTACACAGTGAGAGTGCATCTTCAAATTAAGAACCAAAAAATT  250

seq1  AAATACTGGCTTAAAGAATCTTTTCTCGCCGGGCGGCGGTGGTGTCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTGGCTTAAAGAATCTTTTCTCGCCGGGCGGCGGTGGTGTCACAC  300

seq1  ACCTTTAATCCCAGAACTTGGGAGGCAGAGGAAGGCAGATTTCTGAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAATCCCAGAACTTGGGAGGCAGAGGAAGGCAGATTTCTGAATTC  350

seq1  GAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGAGCTACACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGAGCTACACA  400

seq1  GAGGAAACCTGTCTCAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACCTGTCTCAAAAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAA  450

seq1  TCTTTTCTCTCTTACAACCTTTACATGTATTTGATTATCTATTGCATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTCTCTTACAACCTTTACATGTATTTGATTATCTATTGCATGCA  500

seq1  TGCATTCTCACAGAATAGCCTGCATGTTGAGGTCAGACAACAACAGCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCTCACAGAATAGCCTGCATGTTGAGGTCAGACAACAACAGCTGA  550

seq1  AGTCAGTTCTCCCCTTCCCCCATGTAGATCAGTGGGATCAAATTTAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGTTCTCCCCTTCCCCCATGTAGATCAGTGGGATCAAATTTAGGTT  600

seq1  GCTAGACTTGGTGGCAAGTATCTTTACCTACTGAGTCATCATGTCAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGACTTGGTGGCAAGTATCTTTACCTACTGAGTCATCATGTCAGAAG  650

seq1  TCGCCTTGCACCTTTTAAAAGTATTCATCTTTATTGAGATAAAATTCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCTTGCACCTTTTAAAAGTATTCATCTTTATTGAGATAAAATTCATA  700

seq1  AACCATTTGAGTTATTATTTTAACACAGACAGTTCAGACCTTTCACATAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTGAGTTATTATTTTAACACAGACAGTTCAGACCTTTCACATAA  750

seq1  CAATTTCTGAACCTTCAATGACCTTTACCTCTTGTCAGTAAGGGGTTATA  800
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAATTTCTGAACCTTCAATGACC-TTACCTCTTGTCAGTAAGGGGTTATA  799

seq1  TGCTAGCTGTCACCGTCCTTCTCTCCTGTTTATCTTGTTGTCTCCTGTCC  850
      |||||||||||||||||||   ||||||||||||||| |||||||||| |
seq2  TGCTAGCTGTCACCGTCCTCTCCTCCTGTTTATCTTG-TGTCTCCTGT-C  847

seq1  TCAGTTCTA-GGATATGACCAACCTTTCTGTTTCACACATCTGCCTACT-  898
      |||| |||| |||||||||||||||||||||||||   |||||| |||| 
seq2  TCAGGTCTAGGGATATGACCAACCTTTCTGTTTCAACAATCTGCTTACTT  897

seq1  -CTCTGGACAT-AGTGCAAATGTAATAATATCTAGTTGATTGT-GAGTGG  945
        |||||| || ||||||||||||  | ||||||| ||||||| ||||||
seq2  CTTCTGGAAATAAGTGCAAATGTATAATTATCTAG-TGATTGTGGAGTGG  946

seq1  CTTCTCCTTGGCATAA--TAACTTAGCATTTTGTTTATATTGTAGCACAT  993
      ||||| ||||||||||  |||| ||||| ||||||   |||||||| |||
seq2  CTTCT-CTTGGCATAAACTAACCTAGCAATTTGTT--AATTGTAGC-CAT  992

seq1  ATTATTGACTTGTTCTTTTTATTGCAGAGTAATATTCTATTTTGTGGATC  1043
      |||| |||| ||||| |||||||||||||||  |||||| ||  ||||||
seq2  ATTA-TGAC-TGTTC-TTTTATTGCAGAGTA--ATTCTAATT--TGGATC  1035

seq1  GAT  1046
      |||
seq2  GAT  1038