MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-179D06
Chromosome	4 (Build37)
Map Location	57,063,636 - 57,189,274
singlet/doublet	doublet
Overlap gene	Epb4.1l4b
Upstream gene	Actl7b, Actl7a, Ikbkap, BC026590, Ctnnal1, D730040F13Rik, 6430704M03Rik
Downstream gene	Ptpn3, LOC100041460, 1700042G15Rik, LOC100041342, LOC619973, LOC667049, Palm2, LOC100041513, Akap2, D630039A03Rik, Txn1, Txndc8, Svep1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Actl7b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11471 MGI:1343053
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actl7a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11470 MGI:1343051
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ikbkap (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230233 MGI:1914544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC026590 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230234 MGI:2677850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctnnal1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54366 MGI:1859649
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D730040F13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242474 MGI:2445107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6430704M03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230235 MGI:2442704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 2 Proteins

name	Epb4.1l4b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54357 MGI:1859149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 94 ESTs, 4 Proteins

name	Ptpn3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545622 MGI:105307
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041460 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041460
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	1700042G15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73349 MGI:1920599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs

name	LOC100041342 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 101 mRNAs, 1906 ESTs, 1 Protein

name	LOC619973 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619973
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 11 Proteins

name	LOC667049 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667049
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Palm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242481 MGI:1934601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041513 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041513
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	Akap2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11641 MGI:1306795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	D630039A03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242484 MGI:2442889
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22166 MGI:98874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Txndc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67402 MGI:1914652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Svep1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64817 MGI:1928849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Actl7b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956123 GeneID:11471 MGI:1343053
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin-like 7b transcript_id : NM_025271.1

name	Actl7a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350072 GeneID:11470 MGI:1343051
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : actin-like 7a transcript_id : NM_009611.2

name	Ikbkap (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368357 GeneID:230233 MGI:1914544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein transcript_id : NM_026079.2

name	BC026590 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487244 GeneID:230234 MGI:2677850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC026590 transcript_id : NM_001081420.1

name	Ctnnal1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542342 GeneID:54366 MGI:1859649
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : catenin (cadherin associated protein), alpha-like 1 transcript_id : NM_018761.2

name	D730040F13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126723477 GeneID:242474 MGI:2445107
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D730040F13 gene transcript_id : NM_175518.4

name	Epb4.1l4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252408 GeneID:54357 MGI:1859149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins product : erythrocyte protein band 4.1-like 4b, transcript variant 1 transcript_id : XM_001476161.1

name	Epb4.1l4b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252410 GeneID:54357 MGI:1859149
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 94 ESTs, 2 Proteins product : erythrocyte protein band 4.1-like 4b, transcript variant 2 transcript_id : XM_001476174.1

name	Ptpn3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326174 GeneID:545622 MGI:105307
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein tyrosine phosphatase, non-receptor type 3 transcript_id : NM_011207.1

name	1700042G15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149252414 GeneID:73349 MGI:1920599
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs product : RIKEN cDNA 1700042G15 gene transcript_id : XM_001476256.1

name	LOC100041342 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252412 GeneID:100041342
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 101 mRNAs, 1906 ESTs, 1 Protein product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) transcript_id : XM_001476225.1

name	LOC619973 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252418 GeneID:619973
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 11 Proteins product : similar to LRRGT00183 transcript_id : XM_884359.3

name	Palm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:93004083 GeneID:242481 MGI:1934601
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : paralemmin 2 transcript_id : NM_172868.2

name	Akap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711835 GeneID:11641 MGI:1306795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 2 transcript_id : NM_001035533.1

name	Akap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711833 GeneID:11641 MGI:1306795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 2 transcript_id : NM_001035532.1

name	Akap2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711831 GeneID:11641 MGI:1306795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : A kinase (PRKA) anchor protein 2 transcript_id : NM_009649.2

name	D630039A03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:65301479 GeneID:242484 MGI:2442889
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630039A03 gene transcript_id : NM_178727.2

name	Txn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123701799 GeneID:22166 MGI:98874
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin 1 transcript_id : NM_011660.3

name	Txndc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142365363 GeneID:67402 MGI:1914652
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : thioredoxin domain containing 8 transcript_id : NM_026132.2

name	Svep1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124783267 GeneID:64817 MGI:1928849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 transcript_id : NM_022814.2

name	Actl7b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956124 CCDS:CCDS18196.1 GeneID:11471 MGI:1343053
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005856 - cytoskeleton [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : t-actin 1 product : actin-like 7b protein_id : NP_079547.1

name	Actl7a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6752956 CCDS:CCDS18197.1 GeneID:11470 MGI:1343051
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0009434 - flagellum (sensu Eukaryota) [Evidence IDA]; GO:0001673 - male germ cell nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0005200 - structural constituent of cytoskeleton [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007010 - cytoskeleton organization and biogenesis [Evidence IEA] codon_start : 1 note : t-actin 2; actin-like Tact2 product : actin-like 7a protein_id : NP_033741.1

name	Ikbkap (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734086 GeneID:230233 MGI:1914544
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy note : IKK-complex-associated protein IKAP product : inhibitor of kappa light polypeptide enhancer in B-cells, kinase complex-associated protein protein_id : NP_080355.1

name	BC026590 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487245 GeneID:230234 MGI:2677850
definition	codon_start : 1 product : hypothetical protein LOC230234 protein_id : NP_001074889.1

name	Ctnnal1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542343 CCDS:CCDS18200.1 GeneID:54366 MGI:1859649
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0045296 - cadherin binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0007266 - Rho protein signal transduction [Evidence ISS] codon_start : 1 exception : mismatches in translation note : alpha-catenin related protein; catenin alpha-like 1 product : catenin (cadherin associated protein), alpha-like 1 protein_id : NP_061231.2

name	D730040F13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126723478 GeneID:242474 MGI:2445107
definition	codon_start : 1 product : hypothetical protein LOC242474 protein_id : NP_780727.3

name	Epb4.1l4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252409 GeneID:54357 MGI:1859149
definition	codon_start : 1 product : erythrocyte protein band 4.1-like 4b isoform 1 protein_id : XP_001476211.1

name	Epb4.1l4b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252411 GeneID:54357 MGI:1859149
definition	codon_start : 1 product : erythrocyte protein band 4.1-like 4b isoform 2 protein_id : XP_001476224.1

name	Ptpn3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326175 GeneID:545622 MGI:105307
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0000062 - acyl-CoA binding [Evidence IEA]; GO:0005488 - binding [Evidence IEA]; GO:0008092 - cytoskeletal protein binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004725 - protein tyrosine phosphatase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006470 - protein amino acid dephosphorylation [Evidence IEA] codon_start : 1 note : protein-tyrosine phosphatase H1 product : protein tyrosine phosphatase, non-receptor type 3 protein_id : NP_035337.1

name	1700042G15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149252415 GeneID:73349 MGI:1920599
definition	codon_start : 1 product : hypothetical protein LOC73349 protein_id : XP_001476306.1

name	LOC100041342 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252413 GeneID:100041342
definition	codon_start : 1 product : similar to Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) protein_id : XP_001476275.1

name	LOC619973 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252419 GeneID:619973
definition	codon_start : 1 product : similar to LRRGT00183 protein_id : XP_889452.2

name	Palm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27777697 CCDS:CCDS18202.1 GeneID:242481 MGI:1934601
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : paralemmin 2 protein_id : NP_766456.1

name	Akap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711836 CCDS:CCDS18204.1 GeneID:11641 MGI:1306795
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0051018 - protein kinase A binding [Evidence IPI] GO_process : GO:0007015 - actin filament organization [Evidence IDA]; GO:0008104 - protein localization [Evidence IPI]; GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway [Evidence IPI] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; A kinase anchor protein 2 product : A kinase (PRKA) anchor protein 2 isoform 1 protein_id : NP_001030610.1

name	Akap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711834 CCDS:CCDS18203.1 GeneID:11641 MGI:1306795
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0051018 - protein kinase A binding [Evidence IPI] GO_process : GO:0007015 - actin filament organization [Evidence IDA]; GO:0008104 - protein localization [Evidence IPI]; GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway [Evidence IPI] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; A kinase anchor protein 2 product : A kinase (PRKA) anchor protein 2 isoform 2 protein_id : NP_001030609.1

name	Akap2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711832 CCDS:CCDS18205.1 GeneID:11641 MGI:1306795
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0051018 - protein kinase A binding [Evidence IPI] GO_process : GO:0007015 - actin filament organization [Evidence IDA]; GO:0008104 - protein localization [Evidence IPI]; GO:0007178 - transmembrane receptor protein serine/threonine kinase signaling pathway [Evidence IPI] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; A kinase anchor protein 2 product : A kinase (PRKA) anchor protein 2 isoform 3 protein_id : NP_033779.2

name	D630039A03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520163 CCDS:CCDS18206.1 GeneID:242484 MGI:2442889
definition	codon_start : 1 product : hypothetical protein LOC242484 protein_id : NP_848842.1

name	Txn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755911 CCDS:CCDS18207.1 GeneID:22166 MGI:98874
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0009055 - electron carrier activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : thioredoxin 1 protein_id : NP_035790.1

name	Txndc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229039 CCDS:CCDS18208.1 GeneID:67402 MGI:1914652
definition	GO_function : GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 product : thioredoxin domain containing 8 protein_id : NP_080408.2

name	Svep1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124783268 CCDS:CCDS18209.1 GeneID:64817 MGI:1928849
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] GO_function : GO:0003682 - chromatin binding [Evidence IDA] codon_start : 1 note : polydomain protein; polydomain protein (Polydom) product : polydom precursor protein_id : NP_073725.2

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 6 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 5 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 4 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 3 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 2 pseudo : _no_value

name	LOC100041460 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041460
definition	number : 1 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 5 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 4 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 3 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 2 pseudo : _no_value

name	LOC667049 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667049
definition	number : 1 pseudo : _no_value

name	LOC100041513 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041513
definition	number : 1 pseudo : _no_value

name	LOC100041513 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041513
definition	number : 2 pseudo : _no_value

name	6430704M03Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149252405 GeneID:230235 MGI:2442704
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 2 Proteins product : RIKEN cDNA 6430704M03 gene transcript_id : XR_001596.2

clone name	MSMg01-361G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538H04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103A19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513M11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-400G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-169E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499G01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-206G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-390L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-430G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163K13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249G14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-179D06.b	B6Ng01-179D06.g
ACC	GA005990	GA005991
length	550	449
definition	B6Ng01-179D06.b	B6Ng01-179D06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(57,063,636 - 57,064,184)	(57,188,820 - 57,189,274)
sequence	ttattactcatcagggtctcagacacatccctcttttggtgtttattaag catttccaactgcagtggaaatcctggactcatgtattcactgttgtgtc cacctgacatagcagaagggacatatgaccatcttggttccaaggtacct gttacttatttcagtttttatttagcacacaaggttacaagttcttactg aattcagggaaaacatactctttggctagggtcgaacatacttttgtaac attgtacttcttgcttaattggtttgaagagaaaaaaactgtatcaaagt cttggagacagacacattacaaatgttaggagtgttcattaaggtgattt cctacagaaacttagtttcatttgttaaagaaaacaaagactagagagaa aggtcagtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgt gtgtacacttactgtgcacaaaaccctgggttctatttctggcacctctc tcctacctgacacattttttaaggatgtgtctgtctgtccgtctgcttgt	ttgaaatttgttggtacacccgtggaagtaactcactctcagggcttcct tctcttctccttctgatggagatggatatgtcagccattctgctcctgtt tgttgaacacaggatcacgcacaccacgccgctgtggctccggtggctaa ccgaagagaaagacaaaactttacagacgtgcaatccccttgtgaggcac tggagctggctctgattccaactgcactgctgagagtcgggggctttgga aagtgacaggtgagccttaggcctttagcgtggcactcacgtgattgatt cctggtgcctttatgagatgaaagaaagggaagaaaggatgaagagagca ggggacggagggagcgagagaaagaggactctttttttgatgtatggtag actcccctccgttttttagttggtatcaagtactcccccatgatggatg
quality values	Open. Hide. 46 47 62 47 47 56 62 62 39 42 62 39 39 56 62 62 62 62 62 59 44 62 59 62 59 59 43 39 62 26 24 12 16 13 8 10 10 13 10 18 62 49 62 44 59 59 49 56 54 59 56 56 62 62 62 62 49 30 62 62 62 62 59 56 59 62 62 62 59 62 62 62 62 14 16 10 10 6 7 10 9 18 10 18 8 12 16 62 59 59 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 54 59 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 56 62 56 62 62 62 62 62 62 62 56 54 62 62 56 62 54 62 59 59 56 49 49 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 59 59 51 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 50 62 54 62 62 62 62 62 62 51 24 30 23 18 23 34 29 34 24 43 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 59 62 59 62 59 62 59 59 56 49 34 51 28 24 38 34 35 56 56 51 34 30 39 11 19 25 13 25 18 23 13 24 17 23 13 13 18 13 16 16 21 11 14 14 26 30 32 20 31 29 31 20 22 22 20 24 22 10 10 15 10 10 13 19 18 13 25 22 24 18 14 14 17 26 42 42 21 37 10 22 30 24 28 24 20 24 13 17 22 23 14 37 16 21 21 38 15 30 28 22 26 22 20 32 21 9 10 10 8	Open. Hide. 59 62 62 59 62 59 15 16 11 7 7 7 8 5 8 13 6 5 10 10 16 59 59 59 62 59 59 51 59 51 59 59 62 59 50 59 62 62 62 59 49 59 62 62 62 62 62 62 62 62 62 59 11 13 10 8 11 12 10 10 10 10 10 10 13 12 13 31 54 49 54 54 42 49 54 59 62 62 59 62 62 62 59 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 59 62 48 54 33 42 54 56 54 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 56 62 62 62 59 62 62 62 46 62 62 62 62 56 62 62 54 49 48 24 16 10 23 18 43 56 59 51 49 56 40 56 39 49 59 51 50 49 41 49 50 35 34 31 18 28 23 24 17 23 13 14 13 35 43 50 56 35 38 34 29 39 40 18 18 13 13 18 16 13 27 34 59 59 56 51 51 34 35 27 23 40 30 46 37 43 43 35 28 36 24 11 18 12 13 24 34 34 23 46 51 27 23 28 18 23 24 16 40 23 34 24 27 34 14 14 34 28 18 38 23 34 30 24 24 13 43 27 23 37 34 23 34 35 27 45 46 49 39 18 19 28 12 30 13 49 50 48 43 49 30 12 23 10 11 9 7 5 13 12 13 13 10 9 10 10 13 7 13 34 34 50 11 12 13 16 8 21 23 23 24 24 23 9 13 11 8 23 23 14 14 17 8 7 18 14 23 21 25 23 18 34 34 16 16 21 13 23 27 34 24 34 56 48 13 34 39 27 31 34 34 16 15 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_57063636_57064184
seq2: B6Ng01-179D06.b_53_602

seq1  TTATTACTCATCAGGGTCTCAGACACATCCCTCTCTTGGTGTTTATTAAG  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTATTACTCATCAGGGTCTCAGACACATCCCTCTTTTGGTGTTTATTAAG  50

seq1  CATTTCCAACTGCAGTGGAAATCCTGGACTCATGTATTCACTGTTGTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCAACTGCAGTGGAAATCCTGGACTCATGTATTCACTGTTGTGTC  100

seq1  CACCTGACATAGCAGAAGGGACATATGACCATCTTGGTTCCAAGGTACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGACATAGCAGAAGGGACATATGACCATCTTGGTTCCAAGGTACCT  150

seq1  GTTACTTATTTCAGTTTTTATTTAGCACACAAGGTTACAAGTTCTTACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTATTTCAGTTTTTATTTAGCACACAAGGTTACAAGTTCTTACTG  200

seq1  AATTCAGGGAAAACATACTCTTTGGCTAGGGTCGAACATACTTTTGTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGGAAAACATACTCTTTGGCTAGGGTCGAACATACTTTTGTAAC  250

seq1  ATTGTACTTCTTGCTTAATTGGTTTGAAGAGAAAAAAACTGTATCAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTTCTTGCTTAATTGGTTTGAAGAGAAAAAAACTGTATCAAAGT  300

seq1  CTTGGAGACAGACACATTACAAATGTTAGGAGTGTTCATTAAGGTGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGACAGACACATTACAAATGTTAGGAGTGTTCATTAAGGTGATTT  350

seq1  CCTACAGAAACTTAGTTTCATTTGTTAAAGAAAACAAAGACTAGAGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGAAACTTAGTTTCATTTGTTAAAGAAAACAAAGACTAGAGAGAA  400

seq1  AGGTCAGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  450

seq1  GTGTACACTTACTGTGCACAAAACCCTGGGTTCTATTTCTGGCACCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACACTTACTGTGCACAAAACCCTGGGTTCTATTTCTGGCACCTCTC  500

seq1  TCCTACCTGACACA-TTTTTAAGGATGTGTCTGTCTGTCCGTCTGCTTGT  549
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCCTACCTGACACATTTTTTAAGGATGTGTCTGTCTGTCCGTCTGCTTGT  550

seq1: chr4_57188820_57189274
seq2: B6Ng01-179D06.g_67_521 (reverse)

seq1  CATCCATCATGGGGGAGTACTTGATACCAAGTACTAAACGGAGGGGAGTC  50
      |||||||||||||||||||||||||||||| ||  |||||||||||||||
seq2  CATCCATCATGGGGGAGTACTTGATACCAACTAAAAAACGGAGGGGAGTC  50

seq1  TACCATACATCTTATATTGAGTCCTCTTTCTCTCGCTCCCTCCGTCCCCT  100
      |||||||||||  | |  ||||||||||||||||||||||||||||||||
seq2  TACCATACATCAAAAAAAGAGTCCTCTTTCTCTCGCTCCCTCCGTCCCCT  100

seq1  GCTCTCTTCATCCTTTCTTCCCTTTCTTTCATCTCATAAAGGCACCAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTCATCCTTTCTTCCCTTTCTTTCATCTCATAAAGGCACCAGGA  150

seq1  ATCAATCACGTGAGTGCCACGCTAAAGGCCTAAGGCTCACCTGTCACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCACGTGAGTGCCACGCTAAAGGCCTAAGGCTCACCTGTCACTTT  200

seq1  CCAAAGCCCCCGACTCTCAGCAGTGCAGTTGGAATCAGAGCCAGCTCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCCCCCGACTCTCAGCAGTGCAGTTGGAATCAGAGCCAGCTCCAG  250

seq1  TGCCTCACAAGGGGATTGCACGTCTGTAAAGTTTTGTCTTTCTCTTCGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCACAAGGGGATTGCACGTCTGTAAAGTTTTGTCTTTCTCTTCGGT  300

seq1  TAGCCACCGGAGCCACAGCGGCGTGGTGTGCGTGATCCTGTGTTCAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACCGGAGCCACAGCGGCGTGGTGTGCGTGATCCTGTGTTCAACAA  350

seq1  ACAGGAGCAGAATGGCTGACATATCCATCTCCATCAGAAGGAGAAGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGCAGAATGGCTGACATATCCATCTCCATCAGAAGGAGAAGAGAA  400

seq1  GGAAGCCCTGAGAGTGAGTTACTTCCACGGGTGTACCAACAAATTTCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCCTGAGAGTGAGTTACTTCCACGGGTGTACCAACAAATTTCAAG  450

seq1  AATTC  455
      |||||
seq2  AATTC  455

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BAC

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Alignment Information