BAC Information

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BAC

Clone NameB6Ng01-179L09
Chromosome4 (Build37)
Map Location 35,319,765 - 35,320,787
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665361, LOC665367, 2700059D21Rik, Orc3l, Rars2, Slc35a1, 1700003M02Rik, Gm136, 1810030N24Rik, Zfp292, Cga, Mobkl2b, Ifnk, 3110043O21Rik, LOC620559
Downstream geneLOC621227, Lingo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-179L09.bB6Ng01-179L09.g
ACCGA006355GA006356
length1,0441,208
definitionB6Ng01-179L09.b B6Ng01-179L09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaccctctgaaagggtggtgtgtcctctgttctgctcagccat
ccatgtagctcagcagtgtgatattttattatgcatctttcctataactt
cagggaaagcaggatttcttttttctgtcataggtgaaaaccacatagtg
aaccactgtttgcttttatgagacacagaagcagaccatataccatagtg
tcgactgtgcaagcaggctcccgataagccaacagggacacatgtaaggg
tgagctgcagcaatcacagggtcccggagaagatgtcattcagggattta
caggaaacattttgtgttttcaggttttttttttttttttcttttctatt
tttccttccatataaaaaaaatggaccctggataaataaaactattaaac
aggaaaataaaagcaaaaaatattaatgtggcataattttgaccctcagt
aggcatcggcattccacactgagcaacaccctttaggtggtattggttac
acacaacctagaccaatcctcagccaacgctgaagcaaaaatcatgttgg
taagtaagccagtaggtggcgctgctgctccacgtgctactgctgaagac
cttgcgtgcataaagaagttgcatttctaatggagaagtattttaatgat
gtgggtgcaagggtctgctaaaaaagtgtggccccctttttgtgtcagtc
agtcgtaagcttctctttggaaagggcttagtttcattttgaccttggac
accgagggctgagctctaccaaagagaatgaaaatcagagggagattttg
gggagacagagcttttcaattctcccatagagaaacagagaaataaggtt
agtggtcttggagacagcaagccaagaaccagcacaacctaaagatatta
gcccctgggagaagccccgaggttaatgcggatgaataagagcccacaga
ccccacttacatactaattggtttggtaacttattaacatccttgagaag
gatattttttccccctttgggctcaaaatgaagaatttcctccc
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaagtcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtgggcactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccacgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccatttgcatacactagccaagattttatgga
aaggacccagattgtagctgtctcttgttgagactatgcccggggctcta
gcaacacagaagtggatgctcaccaatcagctaatgggatggaatcatag
ggctcccaatggaagtagctagagaaaagtagccaaggagctaagggatc
ttgcaacccttattaggttggtaccacatttatataaactaaccagtacc
ctggagcctctgactctagctgcataatatatcaaaagatgcctagtcgc
catcacttgcaatgaagaggccatgtactgcaactttatatgcccagtac
aggtacctagggtctaaaagggtactggtgtgccaatggtgaagtgcgtg
ggtcgtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_35319765_35320787
seq2: B6Ng01-179L09.b_41_1084

seq1  GAATTCAGACCCTCTGAAAGGGTGGTGTGTCCTCTGTTCTGCTCAGCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACCCTCTGAAAGGGTGGTGTGTCCTCTGTTCTGCTCAGCCAT  50

seq1  CCATGTAGCTCAGCAGTGTGATATTTTATTATGCATCTTTCCTATAACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTAGCTCAGCAGTGTGATATTTTATTATGCATCTTTCCTATAACTT  100

seq1  CAGGGAAAGCAGGATTTCTTTTTTCTGTCATAGGTGAAAACCACATAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAAGCAGGATTTCTTTTTTCTGTCATAGGTGAAAACCACATAGTG  150

seq1  AACCACTGTTTGCTTTTATGAGACACAGAAGCAGACCATATACCATAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTGTTTGCTTTTATGAGACACAGAAGCAGACCATATACCATAGTG  200

seq1  TCGACTGTGCAAGCAGGCTCCCGATAAGCCAACAGGGACACATGTAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACTGTGCAAGCAGGCTCCCGATAAGCCAACAGGGACACATGTAAGGG  250

seq1  TGAGCTGCAGCAATCACAGGGTCCCGGAGAAGATGTCATTCAGGGATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGCAGCAATCACAGGGTCCCGGAGAAGATGTCATTCAGGGATTTA  300

seq1  CAGGAAACATTTTGTGTTTTCAGGTTTTTTTTTTTTTTTTCTTTTCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAACATTTTGTGTTTTCAGGTTTTTTTTTTTTTTTTCTTTTCTATT  350

seq1  TTTCCTTCCATATAAAAAAAATGGACCCTGGATAAATAAAACTATTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTCCATATAAAAAAAATGGACCCTGGATAAATAAAACTATTAAAC  400

seq1  AGGAAAATAAAAGCAAAAAATATTAATGTGGCATAATTTTGACCCTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAATAAAAGCAAAAAATATTAATGTGGCATAATTTTGACCCTCAGT  450

seq1  AGGCATCGGCATTCCACACTGAGCAACACCCTTTAGGTGGTATTGGTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCGGCATTCCACACTGAGCAACACCCTTTAGGTGGTATTGGTTAC  500

seq1  ACACAACCTAGACCAATCCTCAGCCAACGCTGAAGCAAAAATCATGTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACCTAGACCAATCCTCAGCCAACGCTGAAGCAAAAATCATGTTGG  550

seq1  TAAGTAAGCCAGTAGGTGGCGCTGCTGCTCCACGTGCTACTGCTGAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAGCCAGTAGGTGGCGCTGCTGCTCCACGTGCTACTGCTGAAGAC  600

seq1  CTTGCGTGCATAAAGAAGTTGCATTTCTAATGGAGAAGTATTTTAATGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCGTGCATAAAGAAGTTGCATTTCTAATGGAGAAGTATTTTAATGAT  650

seq1  GTGGGTGCAAGGGTCTGCT-AAAAAGTGTGGCCCCC-TTTTGTGTCAGTC  698
      ||||||||||||||||||| |||||||||||||||| |||||||||||||
seq2  GTGGGTGCAAGGGTCTGCTAAAAAAGTGTGGCCCCCTTTTTGTGTCAGTC  700

seq1  AGTCGTAAGCTTCTC-TTGGAAAGGGCTTAG-TTCA-TTTGACCTTGGAC  745
      ||||||||||||||| ||||||||||||||| |||| |||||||||||||
seq2  AGTCGTAAGCTTCTCTTTGGAAAGGGCTTAGTTTCATTTTGACCTTGGAC  750

seq1  ACCGAGGGCTGAGCTCTACCAAAGAGAATGAAAATCAGAGGGAGA-TTTG  794
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ACCGAGGGCTGAGCTCTACCAAAGAGAATGAAAATCAGAGGGAGATTTTG  800

seq1  GGGAGACCAGAGC-TTTCAATTCTCCCATAGAGAAACAGAGAAATAAGGT  843
      |||||| |||||| ||||||||||||||||||||||||||||||||||||
seq2  GGGAGA-CAGAGCTTTTCAATTCTCCCATAGAGAAACAGAGAAATAAGGT  849

seq1  TAGTGGTC-TGGAGACAGCAAG-CAAGAAACAGCACAA-CTAAAGATATT  890
      |||||||| ||||||||||||| |||||| |||||||| |||||||||||
seq2  TAGTGGTCTTGGAGACAGCAAGCCAAGAACCAGCACAACCTAAAGATATT  899

seq1  AGCCC--TGGAG-AGCCCCGAGGTTAATGCGGATG-ATAAGAG-CCACAG  935
      |||||   |||| |||||||||||||||||||||| ||||||| ||||||
seq2  AGCCCCTGGGAGAAGCCCCGAGGTTAATGCGGATGAATAAGAGCCCACAG  949

seq1  ACCCCAC-TACATACTAATTTGGTTTGTTAACTTATT-ACATCCTTGAG-  982
      ||||||| |||||||||| |||||||| ||||||||| ||||||||||| 
seq2  ACCCCACTTACATACTAA-TTGGTTTGGTAACTTATTAACATCCTTGAGA  998

seq1  AGGATA-TTTTTCCCCCTTTGG--TCTAGATGAAGAATT--CTCCC  1023
      |||||| |||||||||||||||  || | ||||||||||  |||||
seq2  AGGATATTTTTTCCCCCTTTGGGCTCAAAATGAAGAATTTCCTCCC  1044