MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-179M05
Chromosome	4 (Build37)
Map Location	95,144,175 - 95,276,182
singlet/doublet	doublet
Overlap gene	2310009E04Rik
Upstream gene	5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411
Downstream gene	Hook1, Cyp2j13, LOC242546, LOC546837, Cyp2j11, LOC665095, Cyp2j6, Cyp2j9
Link	Open Mouse BAC browser

Click to get alignment info.

name	5830433M19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67770 MGI:1915020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Plaa (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18786 MGI:104810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667250 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrc19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100061 MGI:2140219
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ift74 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67694 MGI:1914944
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tek (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21687 MGI:98664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930579C15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67753 MGI:1915003
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039252 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 77 ESTs, 7 Proteins

name	Mysm1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320713 MGI:2444584
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039265 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039265
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC665029 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665029
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 244 ESTs, 4 Proteins pseudo : _no_value

name	Jun (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16476 MGI:96646
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042411 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042411
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	2310009E04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75578 MGI:1922828
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hook1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77963 MGI:1925213
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp2j13 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:230459 MGI:2385197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC242546 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:242546
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 57 Proteins

name	LOC546837 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 Proteins

name	Cyp2j11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100066 MGI:2140224
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665095 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665095
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 48 Proteins

name	Cyp2j6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13110 MGI:1270148
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp2j9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74519 MGI:1921769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5830433M19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956173 GeneID:67770 MGI:1915020
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5830433M19 gene transcript_id : NM_026368.1

name	Plaa (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114431249 GeneID:18786 MGI:104810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phospholipase A2, activating protein transcript_id : NM_172695.2

name	LOC667250 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:124486605 GeneID:667250
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : similar to H3 histone, family 3B transcript_id : NM_001081019.1

name	Lrrc19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375066 GeneID:100061 MGI:2140219
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 19 transcript_id : NM_175305.3

name	Ift74 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13385815 GeneID:67694 MGI:1914944
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : intraflagellar transport 74 homolog (Chlamydomonas) transcript_id : NM_026319.1

name	Tek (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185950 GeneID:21687 MGI:98664
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endothelial-specific receptor tyrosine kinase transcript_id : NM_013690.2

name	4930579C15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803488 GeneID:67753 MGI:1915003
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930579C15 gene transcript_id : NM_027089.3

name	LOC100039252 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252779 GeneID:100039252
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 77 ESTs, 7 Proteins product : similar to small androgen receptor-interacting protein transcript_id : XM_001472546.1

name	Mysm1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50980310 GeneID:320713 MGI:2444584
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myb-like, SWIRM and MPN domains 1 transcript_id : NM_177239.2

name	LOC100039265 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252781 GeneID:100039265
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039265 transcript_id : XM_001472567.1

name	Jun (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754401 GeneID:16476 MGI:96646
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Jun oncogene transcript_id : NM_010591.1

name	LOC100042411 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149252795 GeneID:100042411
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042411 transcript_id : XM_001478878.1

name	2310009E04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:58037420 GeneID:75578 MGI:1922828
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310009E04 gene transcript_id : NM_029347.1

name	Hook1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254145 GeneID:77963 MGI:1925213
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hook homolog 1 (Drosophila) transcript_id : NM_030014.2

name	Cyp2j13 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803178 GeneID:230459 MGI:2385197
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily j, polypeptide 13 transcript_id : NM_145548.3

name	LOC242546 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372132 GeneID:242546
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 57 Proteins product : similar to cytochrome P450, family 2, subfamily j, polypeptide 11 transcript_id : XM_143892.5

name	LOC546837 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:82894296 GeneID:546837
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 35 Proteins product : similar to cytochrome P450, family 2, subfamily j, polypeptide 11 transcript_id : XM_621630.2

name	Cyp2j11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:51921286 GeneID:100066 MGI:2140224
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily j, polypeptide 11 transcript_id : NM_001004141.1

name	LOC665095 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94372134 GeneID:665095
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 48 Proteins product : similar to cytochrome P450, family 2, subfamily j, polypeptide 11 transcript_id : XM_974565.1

name	Cyp2j6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802269 GeneID:13110 MGI:1270148
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily j, polypeptide 6 transcript_id : NM_010008.3

name	Cyp2j9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130572 GeneID:74519 MGI:1921769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily j, polypeptide 9 transcript_id : NM_028979.2

name	5830433M19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956174 CCDS:CCDS18358.1 GeneID:67770 MGI:1915020
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC67770 protein_id : NP_080644.1

name	Plaa (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114431250 CCDS:CCDS18359.1 GeneID:18786 MGI:104810
definition	GO_function : GO:0016005 - phospholipase A2 activator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006954 - inflammatory response [Evidence IDA] codon_start : 1 product : phospholipase A2, activating protein protein_id : NP_766283.2

name	LOC667250 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:124486606 GeneID:667250
definition	codon_start : 1 product : similar to H3 histone, family 3B protein_id : NP_001074488.1

name	Lrrc19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424976 CCDS:CCDS18360.1 GeneID:100061 MGI:2140219
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine rich repeat containing 19 protein_id : NP_780514.1

name	Ift74 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385816 GeneID:67694 MGI:1914944
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : capillary morphogenesis protein 1 product : coiled-coil domain containing 2 protein_id : NP_080595.1

name	Tek (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185951 CCDS:CCDS18361.1 GeneID:21687 MGI:98664
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0016337 - cell-cell adhesion [Evidence IMP]; GO:0007160 - cell-matrix adhesion [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0045765 - regulation of angiogenesis [Evidence IMP]; GO:0030334 - regulation of cell migration [Evidence IMP] codon_start : 1 product : endothelial-specific receptor tyrosine kinase protein_id : NP_038718.2

name	4930579C15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:59709445 CCDS:CCDS18362.1 GeneID:67753 MGI:1915003
definition	codon_start : 1 product : acrosome formation associated factor protein_id : NP_081365.2

name	LOC100039252 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252780 GeneID:100039252
definition	codon_start : 1 product : similar to small androgen receptor-interacting protein protein_id : XP_001472596.1

name	Mysm1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:50980311 CCDS:CCDS18363.1 GeneID:320713 MGI:2444584
definition	GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : myb-like, SWIRM and MPN domains 1 protein_id : NP_796213.2

name	LOC100039265 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252782 GeneID:100039265
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472617.1

name	Jun (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754402 CCDS:CCDS18364.1 GeneID:16476 MGI:96646
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0050875 - cellular physiological process [Evidence IMP]; GO:0035026 - leading edge cell differentiation [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : activator protein 1; immediate early product : Jun oncogene protein_id : NP_034721.1

name	LOC100042411 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149252796 GeneID:100042411
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478928.1

name	2310009E04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037421 CCDS:CCDS18365.1 GeneID:75578 MGI:1922828
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0008741 - ribulokinase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC75578 protein_id : NP_083623.1

name	Hook1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22003856 CCDS:CCDS18367.1 GeneID:77963 MGI:1925213
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005874 - microtubule [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0008017 - microtubule binding [Evidence ISS] [Evidence IDA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0000226 - microtubule cytoskeleton organization and biogenesis [Evidence IEA]; GO:0007286 - spermatid development [Evidence IMP]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 note : abnormal spermatozoon head shape product : hook homolog 1 protein_id : NP_084290.1

name	Cyp2j13 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84370264 CCDS:CCDS18368.1 GeneID:230459 MGI:2385197
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016712 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : cytochrome P450, 2j13 product : cytochrome P450, family 2, subfamily j, polypeptide 13 protein_id : NP_663523.2

name	LOC242546 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372133 GeneID:242546
definition	codon_start : 1 product : similar to cytochrome P450 monooxygenase protein_id : XP_143892.5

name	LOC546837 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:82894297 GeneID:546837
definition	codon_start : 1 product : hypothetical protein protein_id : XP_621630.2

name	Cyp2j11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51921287 GeneID:100066 MGI:2140224
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016712 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cytochrome P450, 2j11 product : cytochrome P450, family 2, subfamily j, polypeptide 11 protein_id : NP_001004141.1

name	LOC665095 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94372135 GeneID:665095
definition	codon_start : 1 product : hypothetical protein protein_id : XP_979659.1

name	Cyp2j6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981813 CCDS:CCDS18369.1 GeneID:13110 MGI:1270148
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016712 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen [Evidence IEA]; GO:0050381 - unspecific monooxygenase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cytochrome P450, 2j6 product : cytochrome P450, family 2, subfamily j, polypeptide 6 protein_id : NP_034138.2

name	Cyp2j9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:24850102 CCDS:CCDS18370.1 GeneID:74519 MGI:1921769
definition	GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004497 - monooxygenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016712 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : cytochrome P450, 2j9 product : cytochrome P450, family 2, subfamily j, polypeptide 9 protein_id : NP_083255.1

name	LOC665029 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149252794 GeneID:665029
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 244 ESTs, 4 Proteins product : similar to ribosomal protein L29 pseudo : _no_value transcript_id : XR_033942.1

clone name	MSMg01-345H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-188H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483N10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-054J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119D09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510G10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-196H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505I05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-390D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-410N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140J07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-217G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-522A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405H14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-103L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-320M15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-188J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145G14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-074H16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518H18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-376O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-085A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454F23
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-490D13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-046N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247N04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-219F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177K18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306A22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-179M05.b	B6Ng01-179M05.g
ACC	GA006394	GA006395
length	925	1,145
definition	B6Ng01-179M05.b	B6Ng01-179M05.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(95,275,259 - 95,276,182)	(95,144,175 - 95,145,338)
sequence	gaattcacaatctggaaaggtttttccattgcactcagcatctgctatat gaaaagtaatgatggagtccttaaacacgctcccacagcctgaatctcaa ctgcaaatgcctggaggggagggttgaaaggaaaatgattaaggagtctg gatggggcctgctttgtcaggaggtgtgccaaccctctaacatgacaggc gcttctcagaacggccattctccagcatggttgtgtgggcctgggactgt gagcttctttctttttccagatttgaaggaaatctatatttttatgagaa tttcttagttcttaagtattggaaatgctcaaaattgttctttcccaagt atacagtgagtcaaaaaaaaaaaaaaaaaaaaaaactcttctgggggcct gattcagtcttgtggcagcaggggagacaaatgagtgattttttttttaa gagcaagcagtaagggatgaaggttggaacctaggaactgtggacaggct gagccttgtgagactctcctggcagttcatgcctttcccgggtacccttg gctggacaatgagatgagaacaccgttattgaggagcttgcatgaaattc ctcagtgatatttagtgatatataataggtccaagaagaataaattcccc tgtagaataagtgataagcgttatcaaccagaaagtctggctgtgtctac aggctttttttttttttcatgaggaattaccaagaagcaaagaatgagac tgttcttaccatatccaaagaatccaacaaggacagtgtcccagtagtga caccttctttctctataacttgcccattttccgaatgcttccttcaagag atgttatttaggaacctgcacattcaatatttagtgttttctctttaata ctatgggtgtattgtttgttgtgtt	gaattcagtaggaagtgcaaggaggccaaaatgaacagttagatgctaag gtagtaagtttactgataaaggaacgaaaacagctacatcatgacgtaca tgacaacatagaacctagacataggcagggctgagagaaatggaggtgag ccagcagcttacagacaggtgttggctgacatggtggaaaggaacatgaa cctgcatgtctccacagagtatcaaaattcaattcccattcccatacacc acgcccacacactgactaccagttttgtcctaacagggggatgactggct ccttcctggcctaatccatatgtctctctgtcatctggattctaatttct gacttctccgtaccaagtactgtgctgcttaaagtctgtattaagttact gtttaatgatcgagttctcagggtttgaggcacagtacgatagacatggt gggtgacagaggtagacttttgcaaagttgaagacaagaatgatgtagct caggagacatgaagggagtggtcactttggttgacatttcacaatgcttt gacctagaaatgtagacaaagctgcactcaaatgctgtaaaaatgtttac tagccccacaaccctaacaaatatagtaagaacttgatataactgttacc cagtaaaggaatatcagggcttttattttataattctctcaaattttata atcaatagttgagttgtctacctcagtctagtatctttgctagtatatgg acaacagaagataccttggtcaaaaaggttttttaaaaattcagatttta aatcaaatagattcaacttcaggaaagacctttgcctctttctgtgggac tttaggcaacacaaattttctgatttttcagtgttctttctataaataga ctaagacttcaattttactaaggcaattaattgtgttctattaccatatg actcctgaaaaacaaacagataaaacaaacatccaatttcaaacagcagc agcagctctatcccagaatccagcgagttgcctggatcagctggaacatg cttaaagctctgttccactagctgatcatctgagtatgatgaagcctatc accagacgtttctactgtgatatttgtctgggtaattctagcact
quality values	Open. Hide. 41 29 29 34 58 31 20 39 28 58 58 58 45 49 58 42 62 62 62 41 31 62 62 62 62 62 39 31 62 62 62 54 62 54 18 16 7 8 9 9 19 9 8 19 8 6 10 12 16 34 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 59 59 50 50 48 27 35 23 18 18 25 23 28 29 40 51 51 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 54 59 62 62 59 54 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 56 50 46 50 48 48 56 56 56 54 62 62 62 59 59 45 43 40 29 40 56 56 50 29 45 59 59 59 56 38 46 28 27 27 25 32 37 51 59 50 32 43 34 44 51 45 56 51 51 56 59 41 50 38 43 51 59 62 62 62 62 62 62 62 45 38 34 30 59 30 59 56 62 62 62 62 56 62 62 62 56 62 41 28 44 41 46 50 56 62 56 56 62 56 56 56 46 46 44 50 26 43 56 56 43 56 62 24 43 46 43 51 56 62 56 38 43 37 45 39 56 56 56 56 62 38 26 27 21 31 26 38 38 36 36 41 36 56 46 56 56 56 56 56 56 43 56 56 40 40 56 56 62 56 62 46 62 62 52 52 35 47 42 46 41 35 62 49 47 52 62 54 46 35 52 52 33 47 43 40 39 25 40 52 33 52 39 52 42 41 52 52 42 48 32 46 52 47 50 40 40 48 30 50 52 47 48 42 33 52 52 48 54 30 41 54 54 54 52 54 43 26 38 43 31 25 33 40 42 42 42 35 33 52 47 52 32 52 42 42 58 49 50 42 39 23 18 58 46 34 58 32 58 49 16 58 51 37 53 51 50 46 26 41 50 50 44 40 48 39 41 29 58 46 32 50 58 33 44 48 46 39 58 58 46 53 53 58 40 39 52 53 40 26 39 58 50 37 49 31 39 28 26 41 47 58 58 26 53 45 19 35 33 39 41 32 50 25 32 50 22 43 50 58 58 54 54 54 54 54 54 54 52 32 31 13 23 22 35 18 29 40 26 37 37 30 45 42 15 28 23 54 39 14 34 44 54 25 14 49 24 25 40 39 13 28 15 30 52 31 31 28 21 37 21 40 40 29 39 33 40 25 34 41 53 26 13 51 15 20 31 25 32 19 33 33 12 19 35 35 31 24 33 11 32 32 34 47 20 18 24 35 33 13 23 39 33 24 31 31 34 34 31 26 28 51 28 36 43 36 25 31 33 29 29 24 14 14 31 20 46 28 15 17 48 48 17 19 33 10 43 37 32 32 30 42 10 9 33 32 26 25 30 13 16 31 10 32 18 12 9 9 19 9 46 41 31 23 29 25 33 23 29 27 42 21 14 31 18 19 26 31 32 31 19 35 20 41 18 23 18 12 48 27 46 31 27 30 13 17 19 44 8 38 32 22 36 27 18 33 21 22 41 22 7 30 9 25 8 9 24 5 22 9 29 11 13 19 6 11 6 8	Open. Hide. 62 47 42 47 62 47 41 56 62 62 62 62 8 14 19 10 6 6 7 10 9 18 22 18 19 11 26 18 18 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 59 62 62 59 62 59 62 62 62 62 62 56 24 24 24 18 29 23 34 28 27 27 34 36 34 32 45 51 59 50 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 59 62 62 62 62 59 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 50 32 27 56 56 56 44 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 49 46 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 43 62 62 52 62 62 53 62 62 58 58 54 49 58 58 54 58 58 58 58 58 54 58 58 58 58 46 54 54 58 58 58 46 54 58 58 58 58 54 54 54 58 58 58 58 58 58 54 54 54 38 54 54 58 38 58 58 54 54 58 46 58 52 54 52 40 58 58 58 54 52 41 43 52 54 58 54 50 58 58 51 58 54 58 58 51 49 58 58 58 42 45 49 40 58 58 53 58 58 58 45 45 58 58 48 46 51 40 48 43 58 58 58 52 51 53 52 58 51 53 53 58 58 58 50 51 58 54 58 58 50 47 58 58 47 39 52 53 58 52 51 54 58 41 51 35 48 58 44 36 52 34 33 58 53 50 43 33 21 50 32 49 50 37 29 49 58 49 54 58 58 51 52 39 58 58 50 32 39 37 50 50 51 50 50 51 52 52 38 58 53 42 54 49 31 49 49 51 40 45 53 25 51 35 53 41 35 54 49 54 34 49 49 50 29 54 47 28 37 51 53 53 37 29 37 53 42 53 31 32 52 43 53 52 54 47 40 33 44 52 40 39 37 52 33 40 54 49 35 31 21 32 52 37 31 47 49 35 35 24 30 42 51 40 27 34 51 30 39 29 51 51 52 36 19 53 14 53 53 53 53 19 51 52 53 53 29 28 36 31 5 7 7 7 40 32 40 41 49 32 45 34 32 53 44 34 32 18 22 29 25 30 31 23 43 35 22 30 23 6 29 42 51 37 31 41 13 25 21 51 33 30 17 29 30 31 30 51 33 28 33 31 23 51 41 10 30 14 30 51 30 30 25 24 28 7 41 26 19 30 21 46 28 31 46 46 30 30 28 22 33 9 46 46 30 26 24 8 7 9 18 10 35 34 34 48 38 33 32 32 31 33 46 32 23 32 21 31 23 30 24 28 6 39 22 24 33 29 16 24 32 48 46 33 16 32 34 21 22 22 23 18 30 25 17 28 29 22 12 11 16 5 10 11 7 15 17 21 31 31 23 18 18 9 8 22 31 31 37 28 31 21 25 25 30 26 48 41 44 26 19 18 44 28 14 12 18 29 13 24 48 48 18 15 17 6 9 7 8 5 11 6 7 10 13 37 16 14 16 31 21 11 19 31 22 21 21 19 8 7 16 12 13 17 34 27 31 20 30 17 29 19 7 13 12 26 7 14 18 8 6 14 10 9 12 16 27 28 21 15 16 16 21 5 11 24 15 9 15 15 13 18 10 5 4 5 11 27 16 14 15 17 28 27 19 27 27 13 5 3 6 10 26 27 8 7 13 6 4 3 7 20 25 3 9 9 7 11 13 8 13 6 5 8 10 2 3 3 2 6 14 8 17 4 18 4 5 10 12 19 22 13 5 13 4 17 14 30 8 12 6 6 21 6 8 3 9 18 4 6 4 14 7 17 8 7 5 18 29 9 1 3 6 8 4 4 6 16 10 6 5 3 1

Alignment Information

BAC End 1

BAC End 2

seq1: chr4_95275259_95276182
seq2: B6Ng01-179M05.b_45_969 (reverse)

seq1  AACACAAC-AACATTACA-CCATAGTATTAAAGAGAAAAACACTAAATAT  48
      |||||||| |||| |||| |||||||||||||||| ||||||||||||||
seq2  AACACAACAAACAATACACCCATAGTATTAAAGAG-AAAACACTAAATAT  49

seq1  TGAATGTGCAGGTTCCTAAAT-ACATCTCTTTGAAGGAAGCATTCGGAAA  97
      ||||||||||||||||||||| ||||||| ||||||||||||||||||||
seq2  TGAATGTGCAGGTTCCTAAATAACATCTC-TTGAAGGAAGCATTCGGAAA  98

seq1  ATGGGCAAGTTATAGAGAAAGAAGGTGTCACTACTGGGACACTGTCCTTG  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCAAGTTATAGAGAAAGAAGGTGTCACTACTGGGACACTGTCCTTG  148

seq1  TTGGATTCTTTGGATATGGTAAGAACAGTCTCATTCTTTGCTTCTTGGTA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTCTTTGGATATGGTAAGAACAGTCTCATTCTTTGCTTCTTGGTA  198

seq1  ATTCCTCATGAAAAAAAAAAAAAGCCTGTAGACACAGCCAGACTTTCTGG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTCATGAAAAAAAAAAAAAGCCTGTAGACACAGCCAGACTTTCTGG  248

seq1  TTGATAACGCTTATCACTTATTCTACAGGGGAATTTATTCTTCTTGGACC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAACGCTTATCACTTATTCTACAGGGGAATTTATTCTTCTTGGACC  298

seq1  TATTATATATCACTAAATATCACTGAGGAATTTCATGCAAGCTCCTCAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATATCACTAAATATCACTGAGGAATTTCATGCAAGCTCCTCAAT  348

seq1  AACGGTGTTCTCATCTCATTGTCCAGCCAAGGGTACCCGGGAAAGGCATG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGTGTTCTCATCTCATTGTCCAGCCAAGGGTACCCGGGAAAGGCATG  398

seq1  AACTGCCAGGAGAGTCTCACAAGGCTCAGCCTGTCCACAGTTCCTAGGTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCAGGAGAGTCTCACAAGGCTCAGCCTGTCCACAGTTCCTAGGTT  448

seq1  CCAACCTTCATCCCTTACTGCTTGCTCTTAAAAAAAAAATCACTCATTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTTCATCCCTTACTGCTTGCTCTTAAAAAAAAAATCACTCATTTG  498

seq1  TCTCCCCTGCTGCCACAAGACTGAATCAGGCCCCCAGAAGAGTTTTTTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCTGCTGCCACAAGACTGAATCAGGCCCCCAGAAGAGTTTTTTTT  548

seq1  TTTTTTTTTTTTTTTGACTCACTGTATACTTGGGAAAGAACAATTTTGAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTGACTCACTGTATACTTGGGAAAGAACAATTTTGAG  598

seq1  CATTTCCAATACTTAAGAACTAAGAAATTCTCATAAAAATATAGATTTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCAATACTTAAGAACTAAGAAATTCTCATAAAAATATAGATTTCC  648

seq1  TTCAAATCTGGAAAAAGAAAGAAGCTCACAGTCCCAGGCCCACACAACCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCTGGAAAAAGAAAGAAGCTCACAGTCCCAGGCCCACACAACCA  698

seq1  TGCTGGAGAATGGCCGTTCTGAGAAGCGCCTGTCATGTTAGAGGGTTGGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGAATGGCCGTTCTGAGAAGCGCCTGTCATGTTAGAGGGTTGGC  748

seq1  ACACCTCCTGACAAAGCAGGCCCCATCCAGACTCCTTAATCATTTTCCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCCTGACAAAGCAGGCCCCATCCAGACTCCTTAATCATTTTCCTT  798

seq1  TCAACCCTCCCCTCCAGGCATTTGCAGTTGAGATTCAGGCTGTGGGAGCG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCTCCCCTCCAGGCATTTGCAGTTGAGATTCAGGCTGTGGGAGCG  848

seq1  TGTTTAAGGACTCCATCATTACTTTTCATATAGCAGATGCTGAGTGCAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAGGACTCCATCATTACTTTTCATATAGCAGATGCTGAGTGCAAT  898

seq1  GGAAAAACCTTTCCAGATTGTGAATTC  924
      |||||||||||||||||||||||||||
seq2  GGAAAAACCTTTCCAGATTGTGAATTC  925

seq1: chr4_95144175_95145338
seq2: B6Ng01-179M05.g_66_1210

seq1  GAATTCAGTAGGAAGTGCAAGGAGGCCAAAATGAACAGTTAGATGCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGGAAGTGCAAGGAGGCCAAAATGAACAGTTAGATGCTAAG  50

seq1  GTAGTAAGTTTACTGATAAAGGAACGAAAACAGCTACATCATGACGTACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAGTTTACTGATAAAGGAACGAAAACAGCTACATCATGACGTACA  100

seq1  TGACAACATAGAACCTAGACATAGGCAGGGCTGAGAGAAATGGAGGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAACATAGAACCTAGACATAGGCAGGGCTGAGAGAAATGGAGGTGAG  150

seq1  CCAGCAGCTTACAGACAGGTGTTGGCTGACATGGTGGAAAGGAACATGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGCTTACAGACAGGTGTTGGCTGACATGGTGGAAAGGAACATGAA  200

seq1  CCTGCATGTCTCCACAGAGTATCAAAATTCAATTCCCATTCCCATACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCATGTCTCCACAGAGTATCAAAATTCAATTCCCATTCCCATACACC  250

seq1  ACGCCCACACACTGACTACCAGTTTTGTCCTAACAGGGGGATGACTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCACACACTGACTACCAGTTTTGTCCTAACAGGGGGATGACTGGCT  300

seq1  CCTTCCTGGCCTAATCCATATGTCTCTCTGTCATCTGGATTCTAATTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTGGCCTAATCCATATGTCTCTCTGTCATCTGGATTCTAATTTCT  350

seq1  GACTTCTCCGTACCAAGTACTGTGCTGCTTAAAGTCTGTATTAAGTTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCTCCGTACCAAGTACTGTGCTGCTTAAAGTCTGTATTAAGTTACT  400

seq1  GTTTAATGATCGAGTTCTCAGGGTTTGAGGCACAGTACGATAGACATGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATGATCGAGTTCTCAGGGTTTGAGGCACAGTACGATAGACATGGT  450

seq1  GGGTGACAGAGGTAGACTTTTGCAAAGTTGAAGACAAGAATGATGTAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGACAGAGGTAGACTTTTGCAAAGTTGAAGACAAGAATGATGTAGCT  500

seq1  CAGGAGACATGAAGGGAGTGGTCACTTTGGTTGACATTTCACAATGCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGACATGAAGGGAGTGGTCACTTTGGTTGACATTTCACAATGCTTT  550

seq1  GACCTAGAAATGTAGACAAAGCTGCACTCAAATGCTGTAAAAATGTTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGAAATGTAGACAAAGCTGCACTCAAATGCTGTAAAAATGTTTAC  600

seq1  TAGCCCCACAACCCTAACAAATATAGTAAGAACTTGATATAACTGTTACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCCACAACCCTAACAAATATAGTAAGAACTTGATATAACTGTTACC  650

seq1  CAGTAAAGGAATATCAGGGCTTTTATTTTATAATTCTCTCAAATTTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAAGGAATATCAGGGCTTTTATTTTATAATTCTCTCAAATTTTATA  700

seq1  ATCAATAGTTGAGTTGTCTACCTCAGTCTAGTATCTTTGCTAGTATATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAGTTGAGTTGTCTACCTCAGTCTAGTATCTTTGCTAGTATATGG  750

seq1  ACAACAGAAGATACCTTGGTCAAAAAGG-TTTTTAAAAATTCAGGATTTT  799
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  ACAACAGAAGATACCTTGGTCAAAAAGGTTTTTTAAAAATTCA-GATTTT  799

seq1  AAATCAAATAGATTCAACTTCAGGAAAGACCTTTGCCTCTTTCTGTGGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAAATAGATTCAACTTCAGGAAAGACCTTTGCCTCTTTCTGTGGGA  849

seq1  CTTTAGGCAACACAAATTTTCTGATTTTTCAGGTGTTCTTTCTATAAAAT  899
      ||||||||||||||||||||||||||||||| ||||||||||||| ||||
seq2  CTTTAGGCAACACAAATTTTCTGATTTTTCA-GTGTTCTTTCTAT-AAAT  897

seq1  AGACTAAGACTTCAATTTTACTAAGGCAATTAAATTGTGTTTCTATTACC  949
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  AGACTAAGACTTCAATTTTACTAAGGCAATT-AATTGTG-TTCTATTACC  945

seq1  ATATGACTCCTTGAAAAAACAAAACAGAATAAAACAAAACAATCCAAATT  999
      |||||||||| |||||||   |||||| ||||||||||   |||| ||||
seq2  ATATGACTCC-TGAAAAA--CAAACAG-ATAAAACAAA--CATCC-AATT  988

seq1  TCAAACAGCAGCAGCAGCTCTATCCCAGAATCCAGCGAGTTGCCTGGATC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGCAGCAGCAGCTCTATCCCAGAATCCAGCGAGTTGCCTGGATC  1038

seq1  AGCTGGACAATGCTTAAAGCTCTG-TCCACTAGGCTGGAATCATCTGAAG  1098
      |||||||  ||||||||||||||| ||||||| ||||  |||||||| ||
seq2  AGCTGGAACATGCTTAAAGCTCTGTTCCACTA-GCTG--ATCATCTG-AG  1084

seq1  TATTAATTGAGCTTATCACCCAAGACAGTTTCTACTGTTGATA-TTGTCT  1147
      || | ||  ||| |||||||  |||| |||||||||| ||||| ||||||
seq2  TA-TGATGAAGCCTATCACC--AGAC-GTTTCTACTG-TGATATTTGTCT  1129

seq1  GGGGTATATCTAGCACT  1164
       |||||  |||||||||
seq2  -GGGTAATTCTAGCACT  1145

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information