BAC Information

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BAC

Clone NameB6Ng01-180J14
Chromosome4 (Build37)
Map Location 147,256,597 - 147,388,719
singlet/doubletdoublet
Overlap geneMfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6
Upstream geneLOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557, LOC545716, LOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1
Downstream geneMthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1, Frap1, Angptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742, LOC100041755, Casz1, Pex14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180J14.bB6Ng01-180J14.g
ACCGA006986GA006987
length988123
definitionB6Ng01-180J14.b B6Ng01-180J14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,387,742 - 147,388,719)(147,256,597 - 147,256,719)
sequence
gaattcaactatcaaggcttttttctgtcccaatgacacttacaatgaca
tggccacactcttcttcaactcccaggagtctgccatcctgcagctcttc
catcaggatggtgagtgtccgtgctgcacacgcccggggtcgatgccagc
tgcctctcaggcatctctctgcaacagtgtcccatgccagagggtcacgt
ttctgcctccagtgttggcaggtgaccaggctggtgtgcaaaagccaccc
tggaggacccaacacagttttctgagcctgtgcaggcatctgctggtgtg
actcaggtctgttctcaccctgcagggactttcagccccgtcaccctggc
cttattcttcatcctctatttcctgctcgcatgctggacttttggcacat
ctgtccccagtggcctcttcgtgccttccctgctgtgtggagcagctttt
ggacgtttagttgccaatgtcctgaaaaggtagtgcggatttaatgagta
cacatgtgcccacatgtttacaggtgtgtgagcccatactaccattgtga
gtctaagcctggctctgtttctctcttcaaccagctacattggactgggc
cacctctattctgggacctttgccctgattggtgcggcagctttcttggg
tggggttgtaaggatgaccatcagcctcacagtcatcctgatcgagtcta
caaatgagatcacctatgggcttccgatcatggtcactctgatggtgagt
gcatcccttctggtggccgacaggctgagggccaggctcccttcaaggcc
tgtctttcaggactcttgcttttgtgttccaggttggccacgtggactgg
agacttgttcaaccaagggcatttatgacgtccatattgggctgagaggt
gtgccttcttctggagttgggagacagacgtgaaaatggacaagaaagaa
cgctgggccgcttcttacgcttttgcaccagcgcccaa
aggatgcagacccagaagctgaaggcagtgagttcaatcactatcaaggt
aagagataaggaaaggtcgtcctattgatttattatttttgattagatgt
atgtgtatatgggtgggtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147387742_147388719
seq2: B6Ng01-180J14.b_44_1031 (reverse)

seq1  TTGGGCGCTGGTGCAAAGGCGTAGGAAGCGG-CCAGCG-TCTTACTTGTC  48
      ||||||||||||||||| ||||| ||||||| |||||| |||| ||||||
seq2  TTGGGCGCTGGTGCAAAAGCGTAAGAAGCGGCCCAGCGTTCTTTCTTGTC  50

seq1  CATTTCCACGTCTGTCTCCC-ACTCCAGAAG-AGGCACACCTCTCAGCCC  96
      ||||| |||||||||||||| |||||||||| ||||||||||||||||||
seq2  CATTTTCACGTCTGTCTCCCAACTCCAGAAGAAGGCACACCTCTCAGCCC  100

seq1  AATATGGACGTCATAAATGCCCTT-GTTGAACAAGTCTCCAGTCCACTTG  145
      |||||||||||||||||||||||| |||||||||||||||||||||| ||
seq2  AATATGGACGTCATAAATGCCCTTGGTTGAACAAGTCTCCAGTCCACGTG  150

seq1  GCC-ACCTGGAACAC-AAAGC-AGAGTCCTG-AAGACAGGCCTTGAAGGG  191
      ||| ||||||||||| ||||| ||||||||| ||||||||||||||||||
seq2  GCCAACCTGGAACACAAAAGCAAGAGTCCTGAAAGACAGGCCTTGAAGGG  200

seq1  AGCCTGGCCCTCAGCCTGTCGGCCACCAG-AGGGATGCACTCACCATCAG  240
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGCCTGGCCCTCAGCCTGTCGGCCACCAGAAGGGATGCACTCACCATCAG  250

seq1  AGTGACCATGATCGGAAGCCCATAGGTGATCTCATTTGTAGACTCGATCA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCATGATCGGAAGCCCATAGGTGATCTCATTTGTAGACTCGATCA  300

seq1  GGATGACTGTGAGGCTGATGGTCATCCTTACAACCCCACCCAAGAAAGCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGACTGTGAGGCTGATGGTCATCCTTACAACCCCACCCAAGAAAGCT  350

seq1  GCCGCACCAATCAGGGCAAAGGTCCCAGAATAGAGGTGGCCCAGTCCAAT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCACCAATCAGGGCAAAGGTCCCAGAATAGAGGTGGCCCAGTCCAAT  400

seq1  GTAGCTGGTTGAAGAGAGAAACAGAGCCAGGCTTAGACTCACAATGGTAG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGGTTGAAGAGAGAAACAGAGCCAGGCTTAGACTCACAATGGTAG  450

seq1  TATGGGCTCACACACCTGTAAACATGTGGGCACATGTGTACTCATTAAAT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGCTCACACACCTGTAAACATGTGGGCACATGTGTACTCATTAAAT  500

seq1  CCGCACTACCTTTTCAGGACATTGGCAACTAAACGTCCAAAAGCTGCTCC  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCACTACCTTTTCAGGACATTGGCAACTAAACGTCCAAAAGCTGCTCC  550

seq1  ACACAGCAGGGAAGGCACGAAGAGGCCACTGGGGACAGATGTGCCAAAAG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCAGGGAAGGCACGAAGAGGCCACTGGGGACAGATGTGCCAAAAG  600

seq1  TCCAGCATGCGAGCAGGAAATAGAGGATGAAGAATAAGGCCAGGGTGACG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCATGCGAGCAGGAAATAGAGGATGAAGAATAAGGCCAGGGTGACG  650

seq1  GGGCTGAAAGTCCCTGCAGGGTGAGAACAGACCTGAGTCACACCAGCAGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGAAAGTCCCTGCAGGGTGAGAACAGACCTGAGTCACACCAGCAGA  700

seq1  TGCCTGCACAGGCTCAGAAAACTGTGTTGGGTCCTCCAGGGTGGCTTTTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCACAGGCTCAGAAAACTGTGTTGGGTCCTCCAGGGTGGCTTTTG  750

seq1  CACACCAGCCTGGTCACCTGCCAACACTGGAGGCAGAAACGTGACCCTCT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAGCCTGGTCACCTGCCAACACTGGAGGCAGAAACGTGACCCTCT  800

seq1  GGCATGGGACACTGTTGCAGAGAGATGCCTGAGAGGCAGCTGGCATCGAC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGGACACTGTTGCAGAGAGATGCCTGAGAGGCAGCTGGCATCGAC  850

seq1  CCCGGGCGTGTGCAGCACGGACACTCACCATCCTGATGGAAGAGCTGCAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGGCGTGTGCAGCACGGACACTCACCATCCTGATGGAAGAGCTGCAG  900

seq1  GATGGCAGACTCCTGGGAGTTGAAGAAGAGTGTGGCCATGTCATTGTAAG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCAGACTCCTGGGAGTTGAAGAAGAGTGTGGCCATGTCATTGTAAG  950

seq1  TGTCATTGGGACAGAAAAAAGCCTTGATAGTTGAATTC  978
      ||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTGGGACAGAAAAAAGCCTTGATAGTTGAATTC  988

seq1: chr4_147256597_147256719
seq2: B6Ng01-180J14.g_70_192

seq1  AGGATGCAGACCCAGAAGCTGAAGGCAGTGAGTTCAATCACTATCAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCAGACCCAGAAGCTGAAGGCAGTGAGTTCAATCACTATCAAGGT  50

seq1  AAGAGATAAGGAAAGGTCGTCCTATTGATTTATTATTTTTGATTAGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGATAAGGAAAGGTCGTCCTATTGATTTATTATTTTTGATTAGATGT  100

seq1  ATGTGTATATGGGTGGGTGGGTG  123
      |||||||||||||||||||||||
seq2  ATGTGTATATGGGTGGGTGGGTG  123