BAC Information

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BAC

Clone NameB6Ng01-180N01
Chromosome4 (Build37)
Map Location 146,653,724 - 146,654,621
singlet/doubletsinglet
Overlap geneLOC545716
Upstream geneLOC100041433, LOC433790, LOC433791, Rex2, LOC100043012, LOC100041461, LOC630093, OTTMUSG00000010105, LOC666445, MGC117846, OTTMUSG00000010694, LOC626480, LOC666474, LOC666482, LOC434514, LOC626288, LOC666498, LOC100043034, LOC666514, LOC100041561, LOC100041570, OTTMUSG00000010657, LOC384087, LOC666546, LOC666557
Downstream geneLOC666574, LOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180N01.bB6Ng01-180N01.g
ACCGA007148GA007149
length9361,006
definitionB6Ng01-180N01.b B6Ng01-180N01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacatatgctgtcagtcttaagtttcttttaggttgagttccca
gaatatgctttgaaccagttaaatatggactggatactgcatatctaggc
tcttaggtagatggaaggtttacatagtacagatattgtaagactcattt
cttacatagccattttcctaaaaaaaaaaaaaaacccacaaagatagcag
tatataattttcgtttgtacctaagatttattattcaaattgttttgttt
tcctccatgttgggatgaccatatgtttgtaaaaaaaagactatattttg
atgtaattcctaaccatttttgaacatctgttagaagactcagagtgaaa
tgtctatagggtgcaaatcgaacaacctgtccttgatcactatataaaaa
aatgtccatatttcctcccttgaatattttgttccccaatctaggtagaa
ctaaagcatccacactttgatcttccttactcttgagcttcatgtgtact
gtaaattatatcttagttactctgagctgtggagcagagaatgacagaaa
agccatccagacactgacccacctgggaatccatcccatatacagacatc
aaacccagatactaatgtggatgccaagaagtgcttgctgagaggagcct
gatatatatctctcctgagaggctctgccaaagcctgacaaatacagagg
tggatgcttgaagccacccattggactgagcttgggttcctgatggagaa
gctagagacaagactcaaggagctgaaggggtttacaacccataggaaga
acaacaatatcaaccaaccagaccctccagagcttactgggactaaacca
ccatccaaagagtacacatggaaggatccaaggctccatctgcctacgta
gcagaggatggccttatcagcatcaatgagaggaga
gaattcacaatgaagcaactgtggaaggctgagaaacttcaaaagaaatg
ttcaaagtctttagtgatcagaaaaatataaatcaaagcaacactgagat
tccaccttccaccaatcagaatggctaagatcaaaaactcaggtgacagc
acttgctggccaggatgtggagaaagaggaccactcctccattgcttgtg
gaattgcaaactggtcaaccattctggaaatcaatctggagattcctaag
aaaattggaaatagatataccttaaaacccagctacaccactcttgggca
tatacacaaaagatgccccaccatgacacaggggcttgtgttccactatg
ttcagagtggccttatttgtgatagccaggagctggaaacaacctatatg
ccccacaatggaagactcgatactgaaatatggttcgtttacacaatgga
atattattcatctattaagaacaatgacatcaagaggtttggaggaaaat
ggattgaactaggaaattccatcctgagtgaggtaactcaaactcagaaa
ggacatgcatagtatgtacacactaataaacggatatcagccaaaaaaag
tatataataaaatgtaagtgacgaaagagggttaataagttcaaggttcc
aagtgaggatatctcaatcccacttgggagagagaagaaagcagtcatgg
gtgaagaaggagggagggacctgagtgggagtagggacagagaagggaag
gggaaacatgatcagacattatgagggataggggggaggactgaagccct
gaggaccagtagaaaaaatggaaatagacagcctcagcaagttaggctat
ggaggtccatctcacatgttccaaagaactaaggaggtgagagactccca
ggacttcaaagggaagagaccttgaataaagtgctgtccagcttcaagtg
gagtggatggaagttgcaattgtttcctgtttgaggatctctcagggaca
aaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_146653724_146654621
seq2: B6Ng01-180N01.b_43_942

seq1  GAATTCAACATATGCTGTCAGTCTTAAGTTTCTTTTAGGTTGAGTTCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACATATGCTGTCAGTCTTAAGTTTCTTTTAGGTTGAGTTCCCA  50

seq1  GAATATGCTTTGAACCAGTTAAATATGGACTGGATACTGCATATCTAGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGCTTTGAACCAGTTAAATATGGACTGGATACTGCATATCTAGGC  100

seq1  TCTTAGGTAGATGGAAGGTTTACATAGTACAGATATTGTAAGACTCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGTAGATGGAAGGTTTACATAGTACAGATATTGTAAGACTCATTT  150

seq1  CTTACATAGCCATTTTCCT--AAAAAAAAAAAAACCCACAAAGATAGCAG  198
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  CTTACATAGCCATTTTCCTAAAAAAAAAAAAAAACCCACAAAGATAGCAG  200

seq1  TATATAATTTTCATTTGTACCTAAGATTTATTATTCAAATTGTTTTGTTT  248
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TATATAATTTTCGTTTGTACCTAAGATTTATTATTCAAATTGTTTTGTTT  250

seq1  TCCTCCATGTTGGGATGACCATATGTTTGTAAAAAAAAGACTATATTTTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATGTTGGGATGACCATATGTTTGTAAAAAAAAGACTATATTTTG  300

seq1  ATGTAATTCCTAACCATTTTTGAACATCTGTTAGAAGACTCAGAGTGAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATTCCTAACCATTTTTGAACATCTGTTAGAAGACTCAGAGTGAAA  350

seq1  TGTCTATAGGGTGCAAATCGAACAACCTGTCCTTGATCACTATATAAAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATAGGGTGCAAATCGAACAACCTGTCCTTGATCACTATATAAAAA  400

seq1  AATGTCCATATTTCCTCCCTTGAATATTTTGTTCCCCAATCTAGGTAGAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCATATTTCCTCCCTTGAATATTTTGTTCCCCAATCTAGGTAGAA  450

seq1  CTAAAGCATCCACACTTTGATCTTCCTTACTCTTGAGCTTCATGTGTACT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGCATCCACACTTTGATCTTCCTTACTCTTGAGCTTCATGTGTACT  500

seq1  GTAAATTATATCTTAGTTACTCTGAGCTGTGGAGCAGAGAATGACAGAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTATATCTTAGTTACTCTGAGCTGTGGAGCAGAGAATGACAGAAA  550

seq1  AGCCATCCAGACACTGACCCACCTGGGAATCCATCCCATATACAGACATC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCCAGACACTGACCCACCTGGGAATCCATCCCATATACAGACATC  600

seq1  AAACCCAGATACTAATGTGGATGCCAAGAAGTGCTTGCTGAGAGGAGCCT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGATACTAATGTGGATGCCAAGAAGTGCTTGCTGAGAGGAGCCT  650

seq1  GATATATCTCTCTCCTGAGAGGCTCTGCCAAAGCCTGACAAATACAGAGG  698
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATATCTCTCCTGAGAGGCTCTGCCAAAGCCTGACAAATACAGAGG  700

seq1  TGGATGCTTGAAGCCACCCATTGGACTGAGCTTGGGTTCCTGATGGAGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTTGAAGCCACCCATTGGACTGAGCTTGGGTTCCTGATGGAGAA  750

seq1  GCTAGAGACAAGACTCAAGGAGCTGAAGGGGTTTACAACCCATAGGAAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAGACAAGACTCAAGGAGCTGAAGGGGTTTACAACCCATAGGAAGA  800

seq1  ACAACAATATCAACCAACCAGACCCTCCAGAGCTTACCAGGACTAAACCA  848
      |||||||||||||||||||||||||||||||||||||  |||||||||||
seq2  ACAACAATATCAACCAACCAGACCCTCCAGAGCTTACTGGGACTAAACCA  850

seq1  CCATCCAAAGAGTACACATGGAAGGATCCAAGGCTCCATCTGCCTACGTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAAAGAGTACACATGGAAGGATCCAAGGCTCCATCTGCCTACGTA  900