BAC Information

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BAC

Clone NameB6Ng01-181N04
Chromosome4 (Build37)10 (Build37)
Map Location 30,592,802 - 30,593,516109,664,538 - 109,664,584
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC665185
Downstream geneLOC619906, LOC100040864, LOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181N04.bB6Ng01-181N04.g
ACCGA007878GA007879
length718919
definitionB6Ng01-181N04.b B6Ng01-181N04.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(30,592,802 - 30,593,516)(109,664,538 - 109,664,584)
sequence
gaattcacagtcttatgtttctcatttatatacatcatggttcaaatgat
cttgcgtctctgaatgagatggagagagggcacagcagagagtccagtaa
tcaggaaaaaatagatagtaccaaagttctggcaacagtcccaattctca
tccaagtaaagctatatctcaggggatcatcttctttctggcaagtaggg
ttggctaatgagtaattatatttccaatttcatgctatcattacaatttg
cacattgactgtaacctgtattatgtaaattatccttgaaacgtgtctaa
tgtaaaaatttaaattcatagtattgtccacagactgtgatttatgtagt
aagtgtaagatttctgctgtaagatgtgtccagagagtactgcatcagga
catctggtggaaggtaaacgtcaccattcaaacagtgcttttcttttcaa
cttgtacttgtaaactttattacatttgcttcattgtaatatatttaaaa
cacaaattatatacaagcaaaacaacataaatgaactaaaagttattcag
acgatagatgatagatagatagatagatagatagatagatagatagatag
atagatagatagatagatagatagatatcatgagcatactcatatgtaag
agtaataaataagaaaaggaggctatcaacttttaagtggggagtatcat
gggaggaatttgtacgta

gaattctttgtttagctctgagccccatttttaatggggttatctgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggataggttaagatccttttccagtctgttggtggcctt
tttgtcttattcaaggtgtcttttgccttgcagaagctttgcaattttat
gaggtcccatttattgattctcgatctttcagcacaagccattgctgttc
tattcaggaatttttcccctgtacccatatcttcgaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtggagttccttgat
cacttagatttgactttaatacaaggagataggaatggatcaatttgcat
tcttctacatgttaaccgccagttgtgccagcaccatttgttgaaaatgc
tgtctttttttccactggatggttttatgtggaggtccttgatctacttg
gacttgtgctttgtacagggagataagaatagttcaatttgcattcttct
acatgctaactgccagttgaaccagcaccatttattgaaaatgctgtctt
tttttttttttttttttaaactggattattgtagctcctttgtcagagat
caagccaccataggtttgtgagttcatttctggttttcaattctgttcca
ataactgcctgtcactgcagtttttatcactattgctctgtagtacagct
tgaggtcagggatggtgattccaccagaagttgttttattgttgagaata
gttttcacttatccagggttttctgttattccagatgaatttgagaattg
ctctttctaactctatgaagaattgaacatcagccttagttcatggtgat
tctgataggatacatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30592802_30593516
seq2: B6Ng01-181N04.b_46_763

seq1  GAATTCACAGTCTTATGTTTCTCATTTATATACATCATGGTTCAAATGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAGTCTTATGTTTCTCATTTATATACATCATGGTTCAAATGAT  50

seq1  CTTGCGTCTCTGAATGAGATGGAGAGAGGGCACAGCAGAGAGTCCAGTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCGTCTCTGAATGAGATGGAGAGAGGGCACAGCAGAGAGTCCAGTAA  100

seq1  TCAGGAAAAAATAGATAGTACCAAAGTTCTGGCAACAGTCCCAATTCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAAAATAGATAGTACCAAAGTTCTGGCAACAGTCCCAATTCTCA  150

seq1  TCCAAGTAAAGCTATATCTCAGGGGATCATCTTCTTTCTGGCAAGTAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGTAAAGCTATATCTCAGGGGATCATCTTCTTTCTGGCAAGTAGGG  200

seq1  TTGGCTAATGAGTAATTATATTTCCAATTTCATGCTATCATTACAATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTAATGAGTAATTATATTTCCAATTTCATGCTATCATTACAATTTG  250

seq1  CACATTGACTGTAACCTGTATTATGTAAATTATCCTTGAAACGTGTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGACTGTAACCTGTATTATGTAAATTATCCTTGAAACGTGTCTAA  300

seq1  TGTAAAAATTTAAATTCATAGTATTGTCCACAGACTGTGATTTATGTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAATTTAAATTCATAGTATTGTCCACAGACTGTGATTTATGTAGT  350

seq1  AAGTGTAAGATTTCTGCTGTAAGATGTGTCCAGAGAGTACTGCATCAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTAAGATTTCTGCTGTAAGATGTGTCCAGAGAGTACTGCATCAGGA  400

seq1  CATCTGGTGGAAGGTAAACGTCACCATTCAAACAGTGCTTTTCTTTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGGTGGAAGGTAAACGTCACCATTCAAACAGTGCTTTTCTTTTCAA  450

seq1  CTTGTACTTGTAAACTTTATTACATTTGCTTCATTGTAATATATTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACTTGTAAACTTTATTACATTTGCTTCATTGTAATATATTTAAAA  500

seq1  CACAAATTATATACAAGCAAAACAACATAAATGAACTAAAAGTTATTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATTATATACAAGCAAAACAACATAAATGAACTAAAAGTTATTCAG  550

seq1  ACGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATAGATGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAG  600

seq1  ATAGATAGATAGATAGATAGATAGATATCATGAGCATACTCATATGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATAGATAGATAGATAGATAGATATCATGAGCATACTCATATGTAAG  650

seq1  AGTAAT-AATAAGAAAAGGAGGCTATCAACTTGAAAGT-GGGAGTATCAT  698
      |||||| |||||||||||||||||||||||||  |||| |||||||||||
seq2  AGTAATAAATAAGAAAAGGAGGCTATCAACTTTTAAGTGGGGAGTATCAT  700

seq1  GGGAGG-AGTTGTAGGTA  715
      |||||| | ||||| |||
seq2  GGGAGGAATTTGTACGTA  718


seq1: chr10_109664538_109664584
seq2: B6Ng01-181N04.g_937_984 (reverse)

seq1  TCCCATGTATCCTATCAG-ATCACCATGCACTAAGGCTGATCTTCAAT  47
      |||||||||||||||||| ||||||||| |||||||||||| ||||||
seq2  TCCCATGTATCCTATCAGAATCACCATGAACTAAGGCTGATGTTCAAT  48


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