BAC Information

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BAC

Clone NameB6Ng01-182G12
Chromosome4 (Build37)
Map Location 92,134,964 - 92,255,969
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC620016, LOC654475, 4930577H14Rik, LOC664886, 1700011H22Rik, LOC68280
Downstream geneLOC620269, LOC384125, Tusc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182G12.bB6Ng01-182G12.g
ACCGA008304GA008305
length9491,135
definitionB6Ng01-182G12.b B6Ng01-182G12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,255,021 - 92,255,969)(92,134,964 - 92,136,130)
sequence
gaattcatagccactatgccgcaagacttccatatcaagatccaggtcag
aaacttctatctcccatcctccagatttggatcactggtgagccttccaa
ttctggattgtagttcatttcagaaatagtcaagatgatgaccaggaata
gccactacaccttatttttctacatcattctctttttaaatgacagtgaa
tgggatttgtagaatagttataaaaattcatgtagtcataccaatttact
ccatctatttctttttttctgagcccccaatttctgattttattttattt
ttaatttttttataagccaaatgtggtcaagaaagaaaatatctttggca
ttgttacttattgctaatgtatgtagcaatggtcatagaatatgtaaatg
caaagagaagaaagaaaaaattaacacaacatagaaaagacatcttaaca
aacaatggatgaatctctttccacattgattatccataaaaattttgaga
taaaaccaaaaatcaggtctaagaaagagcatgaagcacatttaaaaata
aattagattaatatatagtcatctaaactgggagaaaatgctcttttttc
actaattgaaatatgcataataaaagccaaggctatagactaatgatgta
aaatagtctgaatattacggcaaatagtttaaatagttcagaaaattctt
cttgtaaaaaagtataacttttgaaaaatattcactccctgtaaagtacc
atccttaaattcagtaattagtattgaaaacacaagtatcccatcagtat
tttgaagtgagcatttataatagctgtttatttacagtaccaagttcaaa
taggtctctttttttttctgaaataagtttaatcagtattaaaatctcca
tatctcaaggcaccatgtttactattgaagacacacacacaattgatac

gaattcttcagatttcatctccccaatattgggcatttcagctaaggcca
tccccaatgagtcctgggagcttctcataccccaggtttctgggaccttc
tagaagttccccaccgacactcatacctcctgctgcatatttccactcaa
tctctttggcctctgatcttctgtgtggtctactcccatacctgatcctg
tcccacttttcccttccctttctcctctcccaaccagatccctcccttcc
tctgtttctcctgattattttgtaaccacacttgggctttgttccttgtt
aagcttcatacattctttgagttagaactactttcattttttacttccct
gattaacttttgtctctacatcacttatccttcccaggaacatcttccaa
cgatacaatttgctttgtttttattttaggtcttcattttcatttgttga
tgcatgatcaaacccatattcatatggaatttacacagctgattgtagag
gctataaagtcttatgaaatattattagtaaccaaagaacaggagattca
atagtgttgttctagtctgagtgcagaaaataagaagatgccatctcaga
gcaccgtgaattcttcctcattgagacatagttctcattggctttccaca
ggaatgaatgttcctttctaccttggaaggacaatctgatttcctcagtc
aatgcgttcacatagactctccctaaaatattcctaaaggacaaccaaga
aaaatatggctcactaattaatcagataccttgtaagtcattcaattaga
caaactacatggtcttttcttcccttgggattctggttaatgtacattta
tagtaaatattatgcatttatataagtgtggatatgtaaatgtgccttat
ttaacacaaaatgtgttctctttaactcctgatttgagtgaatagcactg
ctctgatctccaattgcaagaatatgaaatttaacatagatatgtctctg
cctctgctctctctcttgcatcatgctccccttctctcctcccatttacc
ccaccctcaatggtcatggacagccttactcctactctctccttccctta
ctcctggccttacttacaaaacttaatcccctcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_92255021_92255969
seq2: B6Ng01-182G12.b_44_992 (reverse)

seq1  GTATCAATTGTGTGTGTGTCTTCAATAGTAAACATGGTGCCTTGAGATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAATTGTGTGTGTGTCTTCAATAGTAAACATGGTGCCTTGAGATAT  50

seq1  GGAGATTTTAATACTGATTAAAACTTATTTCAG-AAAAAAAAGAGACCTA  99
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  GGAGATTTTAATACTGATT-AAACTTATTTCAGAAAAAAAAAGAGACCTA  99

seq1  TTTGAACTTGGTACTGTAAATAAACAGCTATTATAAATGCTCACTTCAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACTTGGTACTGTAAATAAACAGCTATTATAAATGCTCACTTCAAA  149

seq1  ATACTGATGGGATACTTGTGTTTTCAATACTAATTACTGAATTTAAGGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGATGGGATACTTGTGTTTTCAATACTAATTACTGAATTTAAGGAT  199

seq1  GGTACTTTACAGGGAGTGAATATTTTTCAAAAGTTATACTTTTTTACAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTTACAGGGAGTGAATATTTTTCAAAAGTTATACTTTTTTACAAG  249

seq1  AAGAATTTTCTGAACTATTTAAACTATTTGCCGTAATATTCAGACTATTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTTCTGAACTATTTAAACTATTTGCCGTAATATTCAGACTATTT  299

seq1  TACATCATTAGTCTATAGCCTTGGCTTTTATTATGCATATTTCAATTAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCATTAGTCTATAGCCTTGGCTTTTATTATGCATATTTCAATTAGT  349

seq1  GAAAAAAGAGCATTTTCTCCCAGTTTAGATGACTATATATTAATCTAATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGAGCATTTTCTCCCAGTTTAGATGACTATATATTAATCTAATT  399

seq1  TATTTTTAAATGTGCTTCATGCTCTTTCTTAGACCTGATTTTTGGTTTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAAATGTGCTTCATGCTCTTTCTTAGACCTGATTTTTGGTTTTA  449

seq1  TCTCAAAATTTTTATGGATAATCAATGTGGAAAGAGATTCATCCATTGTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAATTTTTATGGATAATCAATGTGGAAAGAGATTCATCCATTGTT  499

seq1  TGTTAAGATGTCTTTTCTATGTTGTGTTAATTTTTTCTTTCTTCTCTTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGATGTCTTTTCTATGTTGTGTTAATTTTTTCTTTCTTCTCTTTG  549

seq1  CATTTACATATTCTATGACCATTGCTACATACATTAGCAATAAGTAACAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACATATTCTATGACCATTGCTACATACATTAGCAATAAGTAACAA  599

seq1  TGCCAAAGATATTTTCTTTCTTGACCACATTTGGCTTATAAAAAAATTAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAAGATATTTTCTTTCTTGACCACATTTGGCTTATAAAAAAATTAA  649

seq1  AAATAAAATAAAATCAGAAATTGGGGGCTCAGAAAAAAAGAAATAGATGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAATAAAATCAGAAATTGGGGGCTCAGAAAAAAAGAAATAGATGG  699

seq1  AGTAAATTGGTATGACTACATGAATTTTTATAACTATTCTACAAATCCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATTGGTATGACTACATGAATTTTTATAACTATTCTACAAATCCCA  749

seq1  TTCACTGTCATTTAAAAAGAGAATGATGTAGAAAAATAAGGTGTAGTGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTCATTTAAAAAGAGAATGATGTAGAAAAATAAGGTGTAGTGGC  799

seq1  TATTCCTGGTCATCATCTTGACTATTTCTGAAATGAACTACAATCCAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTGGTCATCATCTTGACTATTTCTGAAATGAACTACAATCCAGAA  849

seq1  TTGGAAGGCTCACCAGTGATCCAAATCTGGAGGATGGGAGATAGAAGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGCTCACCAGTGATCCAAATCTGGAGGATGGGAGATAGAAGTTT  899

seq1  CTGACCTGGATCTTGATATGGAAGTCTTGCGGCATAGTGGCTATGAATTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGGATCTTGATATGGAAGTCTTGCGGCATAGTGGCTATGAATTC  949


seq1: chr4_92134964_92136130
seq2: B6Ng01-182G12.g_62_1196

seq1  GAATTCTTCAGATTTCATCTCCCCAATATTGGGCATTTCAGCTAAGGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGATTTCATCTCCCCAATATTGGGCATTTCAGCTAAGGCCA  50

seq1  TCCCCAATGAGTCCTGGGAGCTTCTCATACCCCAGGTTTCTGGGACCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAATGAGTCCTGGGAGCTTCTCATACCCCAGGTTTCTGGGACCTTC  100

seq1  TAGAAGTTCCCCACCGACACTCATACCTCCTGCTGCATATTTCCACTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTTCCCCACCGACACTCATACCTCCTGCTGCATATTTCCACTCAA  150

seq1  TCTCTTTGGCCTCTGATCTTCTGTGTGGTCTACTCCCATACCTGATCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGGCCTCTGATCTTCTGTGTGGTCTACTCCCATACCTGATCCTG  200

seq1  TCCCACTTTTCCCTTCCCTTTCTCCTCTCCCAACCAGATCCCTCCCTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTTTTCCCTTCCCTTTCTCCTCTCCCAACCAGATCCCTCCCTTCC  250

seq1  TCTGTTTCTCCTGATTATTTTGTAACCACACTTGGGCTTTGTTCCTTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTCTCCTGATTATTTTGTAACCACACTTGGGCTTTGTTCCTTGTT  300

seq1  AAGCTTCATACATTCTTTGAGTTAGAACTACTTTCATTTTTTACTTCCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCATACATTCTTTGAGTTAGAACTACTTTCATTTTTTACTTCCCT  350

seq1  GATTAACTTTTGTCTCTACATCACTTATCCTTCCCAGGAACATCTTCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACTTTTGTCTCTACATCACTTATCCTTCCCAGGAACATCTTCCAA  400

seq1  CGATACAATTTGCTTTGTTTTTATTTTAGGTCTTCATTTTCATTTGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATACAATTTGCTTTGTTTTTATTTTAGGTCTTCATTTTCATTTGTTGA  450

seq1  TGCATGATCAAACCCATATTCATATGGAATTTACACAGCTGATTGTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGATCAAACCCATATTCATATGGAATTTACACAGCTGATTGTAGAG  500

seq1  GCTATAAAGTCTTATGAAATATTATTAGTAACCAAAGAACAGGAGATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATAAAGTCTTATGAAATATTATTAGTAACCAAAGAACAGGAGATTCA  550

seq1  ATAGTGTTGTTCTAGTCTGAGTGCAGAAAATAAGAAGATGCCATCTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTTGTTCTAGTCTGAGTGCAGAAAATAAGAAGATGCCATCTCAGA  600

seq1  GCACCGTGAATTCTTCCTCATTGAGACATAGTTCTCATTGGCTTTCCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCGTGAATTCTTCCTCATTGAGACATAGTTCTCATTGGCTTTCCACA  650

seq1  GGAATGAATGTTCCTTTCTACCTTGGAAGGACAATCTGATTTCCTCAGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAATGTTCCTTTCTACCTTGGAAGGACAATCTGATTTCCTCAGTC  700

seq1  AATGCGTTCACATAGACTCTCCCTAAAATATTCCTAAAGGACAACCAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCGTTCACATAGACTCTCCCTAAAATATTCCTAAAGGACAACCAAGA  750

seq1  AAAATATGGCTCACTAATTAATCAGATACCTTGTAAGTCATTCAATTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGGCTCACTAATTAATCAGATACCTTGTAAGTCATTCAATTAGA  800

seq1  CAAACTACATGGTCTTTTCTTCCCTTGGGATTCTGGTTAATGTACATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTACATGGTCTTTTCTTCCCTTGGGATTCTGGTTAATGTACATTTA  850

seq1  TAGTAAATATTATGCATTTATAATAAGTGTGGGATATGTAAATGTGCCTT  900
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  TAGTAAATATTATGCATTTAT-ATAAGTGT-GGATATGTAAATGTGCCTT  898

seq1  ATTTAACACAAAATGTGTTCTCTTTAACTCCTGATTTGAGTGAAATAAGG  950
      |||||||||||||||||||||||||||||||||||||||||| ||||  |
seq2  ATTTAACACAAAATGTGTTCTCTTTAACTCCTGATTTGAGTG-AATA--G  945

seq1  CACTGCTCTGAATCTTCCAAATTGCAAAGAATATGAAATTTAAACATTAG  1000
      |||||||||| ||||  | |||||| ||||||||||||||| |||| |||
seq2  CACTGCTCTG-ATCT--CCAATTGC-AAGAATATGAAATTT-AACA-TAG  989

seq1  AATTATGTTCTCTTGCCCTCTTGCCTCTCTCTCTTGCATCATGCTCCCCC  1050
      |  |||| |||||   |||||   ||||||||||||||||||||||||| 
seq2  A--TATG-TCTCT--GCCTCT--GCTCTCTCTCTTGCATCATGCTCCCCT  1032

seq1  TCTCTCTCCCCATTCCCTTTACCCCCACCCTCCACATGGTCATGGCCGGC  1100
      ||||||  ||||     |||| ||||||||||   |||||||||| | ||
seq2  TCTCTCCTCCCA-----TTTA-CCCCACCCTC--AATGGTCATGGACAGC  1074

seq1  CTCTACTTCTCTACTCTCTCCTTCTCTCTACCTTTCTCTGCTCTAC-TAC  1149
      || ||||   |||||||||||||| || |||   ||   ||  ||| |||
seq2  CT-TACT--CCTACTCTCTCCTTCCCT-TAC---TCCTGGCCTTACTTAC  1117

seq1  -AAACTTAACTCCCCTCCA  1167
       |||||||| |||||||||
seq2  AAAACTTAA-TCCCCTCCA  1135


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