BAC Information

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BAC

Clone NameB6Ng01-182H22
Chromosome4 (Build37)
Map Location 55,867,439 - 55,868,619
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC384018, EG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
Downstream geneActl7b, Actl7a, Ikbkap, BC026590, Ctnnal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182H22.bB6Ng01-182H22.g
ACCGA008367GA008368
length1,201673
definitionB6Ng01-182H22.b B6Ng01-182H22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggccttgaactcagaaatctgcctgcc
tctgccttccaagtgctgggattgaaggagtgtgccacaactttttaatt
aatgaaatgagagtgatttggcaaactgaaataactccaaggcttcttat
tgaggaattcttgaaggagttatgggactgatcttcatttcccctcccca
agggctttgttaatggagactatcgagaaagtataaaatcactttctcat
gacgtgctcttgaattggttcgtaaaatcaaacagtagctcctgctgctt
gaatatttagctcaagatatgggagtgacctctaaatcctggatggtcat
aggcccctggaaaagttggttgatcgcttcaagtctcattttcccatctg
acagtgtagctgacatctgacagtgacatctgacagtgtagcagtaagca
ttgcatgagcgcacagcaagtactcaaggagaggatggatctgcatagca
tggaaacttcacctcttttcaccagcaaaggggttccctagcagacacta
aatgactccctgagatgaaccatgagcagcagtctctttaaggagacaga
acagcagtaggcatcaaagaagccaatggaaaactatatgtactgtttat
ctgtcatgtttgtcttaatggattctgcatttagagagctttcatagaag
aaaagagaccaagggggattcttttctaccagcctttgtggcaggtctac
ctggtccaaggcagaaagtcttgcttaccatgggaggtgggacaggcaag
tggagacatggcccttctgggaatcatgctgtattaggtaatgtactaat
ttcctctgacaactacatgatatcacaacatcaggaggaagagagtacag
tccccttcaaaactgggtaagacatagcaacagaggcagcccaatttgcc
cataaagcaggaagaaaagagaaaccaccaatggtgcttggtttcacttc
cctacagttttacacattcccagggttcaccttttatccggtcagccaat
aggatgatgtcactcaccatgcaagggtagactatcgcttcctcatttac
ccttttttgccaacacaggtccataaacaccacttagagaagttttttcc
tggaattgaattcaggttcagtccaattacctattaatataccctatccc
t

gaattcctaaattctccaatacttttaacatgaagaggtgttgtattttc
tcaaatgctttttctgcatctaaggcaatgatcatgcaatttttttcttt
gagtttgtgtatatagtggattgtgttaatggattttcatatattaaacc
aaccttgcatcactgggatgaagcctacttgattgtggtgaatgattgtt
ttgatgtgttcttggattaagtttgaaaaaaatttattgagtatttttgc
atcaatattcataaatgaggttggtctgaagttccctttttcagttgggc
ccttgtgtggtttaagtatcagagtaattgtggctttatacaatgagtta
ggtagtgttcattctctttctatttgatggaatagtttaaagaaaattgg
tattagggcttctttaaaggtctggtagaactttgcactaaatccatctg
gccctgggcttttttttttttttttttttttttttttggttgtgaggttt
ttaatgacttcttctatttccttgtgcaatatgggcctgtttagatagtt
ttacctgctcttgatataactttggtatgtttgcatttgtctagaaaacc
atccatttcatctagatttttccagttttgttgaatataggcttttatag
taagatctgattatttttttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_55867439_55868619
seq2: B6Ng01-182H22.b_46_1246

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCC  50

seq1  TCTGCCTTCCAAGTGCTGGGATTGAAGGAGTGTGCCACAACTTTTTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCCAAGTGCTGGGATTGAAGGAGTGTGCCACAACTTTTTAATT  100

seq1  AATGAAATGAGAGTGATTTGGCAAACTGAAATAACTCCAAGGCTTCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAATGAGAGTGATTTGGCAAACTGAAATAACTCCAAGGCTTCTTAT  150

seq1  TGAGGAATTCTTGAAGGAGTTATGGGACTGATCTTCATTTCCCCTCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAATTCTTGAAGGAGTTATGGGACTGATCTTCATTTCCCCTCCCCA  200

seq1  AGGGCTTTGTTAATGGAGACTATCGAGAAAGTATAAAATCACTTTCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTTGTTAATGGAGACTATCGAGAAAGTATAAAATCACTTTCTCAT  250

seq1  GACGTGCTCTTGAATTGGTTCGTAAAATCAAACAGTAGCTCCTGCTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGTGCTCTTGAATTGGTTCGTAAAATCAAACAGTAGCTCCTGCTGCTT  300

seq1  GAATATTTAGCTCAAGATATGGGAGTGACCTCTAAATCCTGGATGGTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTAGCTCAAGATATGGGAGTGACCTCTAAATCCTGGATGGTCAT  350

seq1  AGGCCCCTGGAAAAGTTGGTTGATCGCTTCAAGTCTCATTTTCCCATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCCTGGAAAAGTTGGTTGATCGCTTCAAGTCTCATTTTCCCATCTG  400

seq1  ACAGTGTAGCTGACATCTGACAGTGACATCTGACAGTGTAGCAGTAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGTAGCTGACATCTGACAGTGACATCTGACAGTGTAGCAGTAAGCA  450

seq1  TTGCATGAGCGCACAGCAAGTACTCAAGGAGAGGATGGATCTGCATAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGAGCGCACAGCAAGTACTCAAGGAGAGGATGGATCTGCATAGCA  500

seq1  TGGAAACTTCACCTCTTTTCACCAGCAAAGGGGTTCCCTAGCAGACACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTTCACCTCTTTTCACCAGCAAAGGGGTTCCCTAGCAGACACTA  550

seq1  AATGACTCCCTGAGATGAACCATGAGCAGCAGTCTCTTTAAGGAGACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCCCTGAGATGAACCATGAGCAGCAGTCTCTTTAAGGAGACAGA  600

seq1  ACAGCAGTAGGCATCAAAGAAGCCAATGGAAAACTATATGTACTGTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGTAGGCATCAAAGAAGCCAATGGAAAACTATATGTACTGTTTAT  650

seq1  CTGTCATGTTTGTCTTAATGGATTCTGCATTTAGAGAGCTTTCATAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATGTTTGTCTTAATGGATTCTGCATTTAGAGAGCTTTCATAGAAG  700

seq1  AAAAGAGACCAAGGGGGATTCTTTTCTACCAGCCTTTGTGGCAGGTCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGACCAAGGGGGATTCTTTTCTACCAGCCTTTGTGGCAGGTCTAC  750

seq1  CTGGTCCAAGGCAGAAAGTCTTGCTTACCATGGGAGGTGGGACAGGCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCCAAGGCAGAAAGTCTTGCTTACCATGGGAGGTGGGACAGGCAAG  800

seq1  TGGAGACATGGCCCTTCTGGGAATCATGCTGTATTAGGTAATGTACTAA-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGGAGACATGGCCCTTCTGGGAATCATGCTGTATTAGGTAATGTACTAAT  850

seq1  TTCCTCTGACAAACTACATGATATCACAACATCAGGAGGAAGAGAGTACA  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGAC-AACTACATGATATCACAACATCAGGAGGAAGAGAGTACA  899

seq1  GTCCC--TCAAAACTGGG-AAGACATAGCAACAGAGGCAGCC--AATTGC  944
      |||||  ||||||||||| |||||||||||||||||||||||  | ||||
seq2  GTCCCCTTCAAAACTGGGTAAGACATAGCAACAGAGGCAGCCCAATTTGC  949

seq1  CCATAAAGCAGGAAGAAAAGAGAAACCAACAATGGTGCTTGG-TTCACTT  993
      |||||||||||||||||||||||||||| ||||||||||||| |||||||
seq2  CCATAAAGCAGGAAGAAAAGAGAAACCACCAATGGTGCTTGGTTTCACTT  999

seq1  -CCTACAG-TTTACACATT-CCAGGG-TCACCTTTATCCCGGCCAGCCCA  1039
       ||||||| |||||||||| |||||| ||||||||   |||| ||||| |
seq2  CCCTACAGTTTTACACATTCCCAGGGTTCACCTTTTATCCGGTCAGCCAA  1049

seq1  TAGGATGATGTCACTCA-CATGC-AGGGTAGACTATCGC-TCCTCATTTA  1086
      ||||||||||||||||| ||||| ||||||||||||||| ||||||||||
seq2  TAGGATGATGTCACTCACCATGCAAGGGTAGACTATCGCTTCCTCATTTA  1099

seq1  ACCCTTTTTGGCAACACAG--TCATAAACA-CACCTAGAG-AGTTTTTTT  1132
       || |||||| ||||||||   |||||||| ||| ||||| |||||||| 
seq2  CCCTTTTTTGCCAACACAGGTCCATAAACACCACTTAGAGAAGTTTTTTC  1149

seq1  CT-GAAGTGATTTTAAGTTCAGTCAAATTAACTATTA--TTAATCTATCC  1179
      || ||| ||| || | |||||||| ||||| ||||||   ||  ||||||
seq2  CTGGAATTGAATTCAGGTTCAGTCCAATTACCTATTAATATACCCTATCC  1199

seq1  CT  1181
      ||
seq2  CT  1201


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