BAC Information

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BAC

Clone NameB6Ng01-182K08
Chromosome4 (Build37)
Map Location 112,888,463 - 112,889,523
singlet/doubletsinglet
Overlap genenone
Upstream geneA430090E18Rik, A030013N09Rik, LOC665949, LOC630887, OTTMUSG00000008540, LOC100040581, A030001H23Rik, LOC433745, LOC545668
Downstream geneLOC230622, LOC100040607, LOC242627, LOC100040625, A630098G03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182K08.bB6Ng01-182K08.g
ACCGA008481GA008482
length1,065777
definitionB6Ng01-182K08.b B6Ng01-182K08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgaatttacaaatgattaaaaagctatttgattaattattgt
aactaaatataattaatagccacaatataattgtgatgtagccttatcta
catcatcaagtattcaagaaactatgtttctttatttttctttctttctt
ccttttctattctactgacttttgaattgttaaggaaatctgagcatgta
acctggccagtgatattcacagcgtaaaagagaaaataagacaaatacct
aaatttctttctcccccgctgctatctgtaggatgtaattgctaggaaaa
agaagctttgggccactgaatagcaagaaagagttaaaatgcaagaagta
atcagcttttggacccattcaccattgctgtactccttcactgtctgtct
cagtatatgtcctacctagtctatggctgcctcacacagtgtgatatcat
ttacagaggatcttggaaggcttactattgtccacttcaagaaaagacaa
ttgggtctggagtgctaaaagaatactaatctagttcatgatataggata
tgtactgcatgtaaaaacttcaactttgtaacaattatttaattataaaa
aacttttagttcaagggcatgggcctgagagataatgaatctatccatct
acaatccagtcatattctgtaagttttctggccttcaattttttgggtgc
tgttacttgagggattctgtggatattgaacttttgaccccagtctgtgt
tatgttgtgctatttattcctacacagtcctcagaagaaacagagtgtgt
gtagcctactgaccctactgcactggtcctaacattccggtttaaacaag
gactgtgaataaccactgcccatgacccacagctctcaaacacagaccta
cccaactttgaagaaagtcactctattttcttcccaacttgtttttggac
agaactactacactttccccccacttaaatccagagagtacagccacgat
taaacaaatctcaattcttttattatcacctccaggcctgcagatacagt
ggctaccaaatctca

gaattcctgatcttccgatacttttaacatgaaggggtgatgtattttat
caaatgctttttctgcattgaagaaggtgttcatgtaattttttaaaatt
tgtttatacagtggattatgttaatggtttttcctatattaaaacaacct
tgcacccctggtatgaagcctgtgtgatcatggtaaataatggttttaat
gtgttcttggattcattttgaaagaattttattgagtatttctacatgga
taatgataagtaagattggtctgaagttctttttggttgggtccttctgt
ggtttaggtatcagagtaattgtggcttcataggacaagttaggtactat
tccttctgtctctattttaaggaatagtttgaggaaaattggtttcaggt
cttctttgaaggtttggtaaaattttatactaaatccacctggccctggc
ctttttggggttgggaggtttttaatgacttcttctatttccttgtgtga
tataggcctgtttagatagtttaccagctcttgatttaacttttgtatgt
ggcatctatttagaaaaacatctattttatctagattttccagtttggtt
gagtatgggttattatagtaggatctgatgatgttttgaatttcttccat
ttgtcttgttatgtttccctttcaattctgattttgttaatttagatact
gcctctggggccctttagtaagtttggatagggtttatctatcttgttga
tttctctctaaaatccatctttggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_112888463_112889523
seq2: B6Ng01-182K08.b_48_1112

seq1  GAATTCACTGAATTTACAAATGATTAAAAAGCTATTTGATTAATTATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAATTTACAAATGATTAAAAAGCTATTTGATTAATTATTGT  50

seq1  AACTAAATATAATTAATAGCCACAATATAATTGTGATGTAGCCTTATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAATATAATTAATAGCCACAATATAATTGTGATGTAGCCTTATCTA  100

seq1  CATCATCAAGTATTCAAGAAACTATGTTTCTTTATTTTTCTTTCTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCAAGTATTCAAGAAACTATGTTTCTTTATTTTTCTTTCTTTCTT  150

seq1  CCTTTTCTATTCTACTGACTTTTGAATTGTTAAGGAAATCTGAGCATGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCTATTCTACTGACTTTTGAATTGTTAAGGAAATCTGAGCATGTA  200

seq1  ACCTGGCCAGTGATATTCACAGCGTAAAAGAGAAAATAAGACAAATACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCCAGTGATATTCACAGCGTAAAAGAGAAAATAAGACAAATACCT  250

seq1  AAATTTCTTTCTCCCCCGCTGCTATCTGTAGGATGTAATTGCTAGGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTTCTCCCCCGCTGCTATCTGTAGGATGTAATTGCTAGGAAAA  300

seq1  AGAAGCTTTGGGCCACTGAATAGCAAGAAAGAGTTAAAATGCAAGAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCTTTGGGCCACTGAATAGCAAGAAAGAGTTAAAATGCAAGAAGTA  350

seq1  ATCAGCTTTTGGACCCATTCACCATTGCTGTACTCCTTCACTGTCTGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTTTTGGACCCATTCACCATTGCTGTACTCCTTCACTGTCTGTCT  400

seq1  CAGTATATGTCCTACCTAGTCTATGGCTGCCTCACACAGTGTGATATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATATGTCCTACCTAGTCTATGGCTGCCTCACACAGTGTGATATCAT  450

seq1  TTACAGAGGATCTTGGAAGGCTTACTATTGTCCACTTCAAGAAAAGACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGAGGATCTTGGAAGGCTTACTATTGTCCACTTCAAGAAAAGACAA  500

seq1  TTGGGTCTGGAGTGCTAAAAGAATACTAATCTAGTTCATGATATAGGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTCTGGAGTGCTAAAAGAATACTAATCTAGTTCATGATATAGGATA  550

seq1  TGTACTGCATGTAAAAACTTCAACTTTGTAACAATTATTTAATTATAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTGCATGTAAAAACTTCAACTTTGTAACAATTATTTAATTATAAAA  600

seq1  AACTTTTAGTTCAAGGGCATGGGCCTGAGAGATAATGAATCTATCCATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAGTTCAAGGGCATGGGCCTGAGAGATAATGAATCTATCCATCT  650

seq1  ACAATCCAGTCATATTCTGTAAGTTTTCTGGCCTTCAATTTTTTGGGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCAGTCATATTCTGTAAGTTTTCTGGCCTTCAATTTTTTGGGTGC  700

seq1  TGTTACTTGAGGGATTCTGTGGATATTGAACTTTTGACCCCAGTCTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACTTGAGGGATTCTGTGGATATTGAACTTTTGACCCCAGTCTGTGT  750

seq1  TATGTTGTGCTATTTATTCCTACACAGTCCTCAGAAGAAACAGAGTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGTGCTATTTATTCCTACACAGTCCTCAGAAGAAACAGAGTGTGT  800

seq1  GTAGCCTACTGACCCTACTGCACTGGTCCTAACATTCCGGTTTAAACAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTACTGACCCTACTGCACTGGTCCTAACATTCCGGTTTAAACAAG  850

seq1  GACTGTGAATAACCACTGCCCATGACCCACAGCTCTCAAACACAGACCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGAATAACCACTGCCCATGACCCACAGCTCTCAAACACAGACCTA  900

seq1  CCCAACTTTGAAGAAAGTCACTCTATTTTCTTCCC-ACTTGTTTTTGGAC  949
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CCCAACTTTGAAGAAAGTCACTCTATTTTCTTCCCAACTTGTTTTTGGAC  950

seq1  AGAACTACTACACTTT-CCCCCACTTAAATCCAGAGAGTACAGCCAACGA  998
      |||||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  AGAACTACTACACTTTCCCCCCACTTAAATCCAGAGAGTACAGCC-ACGA  999

seq1  TTAACAAAATCTCCAATCTTT--ATATCCACTCAGGCCCTGCAGATACAG  1046
      ||||  ||||||| | |||||   ||||  |||  | |||||||||||||
seq2  TTAAACAAATCTCAATTCTTTTATTATCACCTCCAGGCCTGCAGATACAG  1049

seq1  T-GCTACCAAATCTCA  1061
      | ||||||||||||||
seq2  TGGCTACCAAATCTCA  1065


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