BAC Information

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BAC

Clone NameB6Ng01-182N12
Chromosome4 (Build37)
Map Location 60,841,382 - 60,884,427
singlet/doubletdoublet
Overlap genenone
Upstream geneSnx30, Slc46a2, LOC100041656, Mup4, LOC620807, LOC100041658, LOC620846, Mup2, LOC620882, LOC100041687, LOC667221, LOC100038948, LOC620997, Mup1, LOC620942, LOC100039008, LOC100039028, LOC620982, LOC100039054, LOC100039063, LOC667234
Downstream geneLOC100039089, LOC667239, LOC100039116, LOC667242, LOC100039150, LOC100039019, LOC100039177, LOC621093, LOC100039206, LOC621127, LOC100039228, LOC384021, LOC100039247, LOC667278, Mup5, LOC435785, LOC667295, LOC100039305, LOC546832, OTTMUSG00000007485, Mup3, LOC100039345, OTTMUSG00000000231, Zfp37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182N12.bB6Ng01-182N12.g
ACCGA008624GA008625
length1,104815
definitionB6Ng01-182N12.b B6Ng01-182N12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,883,325 - 60,884,427)(60,841,382 - 60,841,990)
sequence
gaattcaaaatctcagaccaagcaatccctttgtaaagtaagaagacagg
gaagaagtgatggttgacacagtagaactgtacaattctttgtgatctgg
gaatacattacagctaagggaacatagagggttggggaaaactgtcacaa
aagcccaaggatgccacatgagcatgtaccctcagataacaagggctgaa
gcagggtgaatttgaagacagatgcccaaccttacatgacatacagaaag
aacacaaatacctgtagctgctgtgacaggaccaaccattctaaatatca
aagcagctgttgacacctaaggactggtctgactgctagatctaggagtt
tcaacttgcaaaagatggcttgatgctcatggttggcccaaatgtcttat
caggaataaataacctcacaaaatatcaacattaggcaccatcctcctga
gattggaaacacaagataattgtgccatctaaaatggtgtctgtcctctg
gctaaaatcagtgacagctacttctttaccaatagcagagttagctttat
gtttgtgtccacttattataaataggatataatgggctatttaatcactg
aagtgtaatttcccaattacacccaacctagagcttattgagacattcct
taaccctataggagttccttatttcattccttttataaagattatcagct
gtgcaaaggccagcacaggaaagaactgttctcccaggagtgctttcact
caagggctgggaggtgaagtagacactttctctccattaacactccaggg
aatgaccagcaagggtgtgcagggcacagaaacagtggagcagctgggac
aggatcccttcagtcaccatctactcccagagcttgggctgttccacagc
cctctgtacacaagtttcagccaggaatagagcgttctccaaggggtata
ggccacaggcttacagaggcacagaagggacaagctcgagccagagacta
caaggccatttacaccaggagtttacagatggcaaaggcaggggccagga
ccttacatacagtaacatgatacttggcatcatccgattcagttatccaa
ccac
gaattcttttctttatttcttccttgactcaaggatcattgagtagagaa
tttttcagtttccatgagtttgtgggctttctgttgtttctgtggttgaa
gtctagatttaatgcatgatagtctgataggatactaggagttatttcaa
tgttcttgtatctgttgagatacaagaccaactgctttgtgattaactat
gtggtcagttttggaaaagattcaatgagatgctaagaagaaggtttttt
tgtgtgtgttttggtgagatgttctctagatatgtgttaggtccatttga
ttcatagcttctgttagtttcattaattctctgcttactttctatctcaa
tgacctatccattgttgagagtgggaacctccacctgtttgattgtatct
tcctgtatttctttaagggatttattcatttttttctttaaaggcctcta
ttatcttcataagattgagtgaatgtcattttcttgtgctttacttgtgt
taggatatccagggtttctgtagtaagatagctatgcactgaagatggcg
tatttcatttggtcttgttggctatgttcttatgctggcctttagtcatc
tggttgtccctggattttataggtgtaacaggtatcaggagattttggcc
taacctggatattcctggtgcagcaggcctctggtgggcagccttgggct
ggacaatggatctcatgtggcaggctcagagcagctggttgtgccccagg
tgacatacagggcaggagattttggggcaggaaatagggtccatcctgaa
tactccaagtacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_60883325_60884427
seq2: B6Ng01-182N12.b_45_1148 (reverse)

seq1  GTGGTGGGATAACTGGATTCTGATGATGCCAAGTATCATTGGTTACTGTA  50
      ||||| |||||||| || || ||||||||||||||||||  |||||||||
seq2  GTGGTTGGATAACT-GAATCGGATGATGCCAAGTATCAT--GTTACTGTA  47

seq1  TGTAAGGTTCTTGCCCCTGCCTTTTGCCATCTGGTTACCTCTGGTGTTAA  100
      |||||||| || ||||||||| |||||||||||   ||  |||||| |||
seq2  TGTAAGGTCCTGGCCCCTGCC-TTTGCCATCTGTAAACTCCTGGTG-TAA  95

seq1  ATGGCCTTGTAGTCTCTGGCTCGAGCTTGTCCCTTCTGTGCATCTGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATGGCCTTGTAGTCTCTGGCTCGAGCTTGTCCCTTCTGTGCCTCTGTAAG  145

seq1  CCTGT-GCCTATACTCCTTGGAGAACGCTCTA-TCCTGGATG-AACTTGT  197
      ||||| |||||||| ||||||||||||||||| |||||| || |||||||
seq2  CCTGTGGCCTATACCCCTTGGAGAACGCTCTATTCCTGGCTGAAACTTGT  195

seq1  GTACAGAGGGCTGTGGAACAGCCCAAGCTCCGGGAGTAGATGGTGACTGA  247
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTACAGAGGGCTGTGGAACAGCCCAAGCTCTGGGAGTAGATGGTGACTGA  245

seq1  AGGGATCCTGTCCCAGCTGCTCCACTGTTTCTGTGCCCTGCACACCCTTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCCTGTCCCAGCTGCTCCACTGTTTCTGTGCCCTGCACACCCTTG  295

seq1  CTGGTCATTCCCTGGAGTGTTAATGGAGAGAAAGTGTCTACTTCACCTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCATTCCCTGGAGTGTTAATGGAGAGAAAGTGTCTACTTCACCTCC  345

seq1  CAGCCCTCGAGTGAAAGCACTCCTGGGAGAACAGTTCTTTCCTGTGCTGG  397
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTTGAGTGAAAGCACTCCTGGGAGAACAGTTCTTTCCTGTGCTGG  395

seq1  CCTTTGCACAGCTGATAATCTTTATAAAAGGAATGAAATAAGGAACTCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCACAGCTGATAATCTTTATAAAAGGAATGAAATAAGGAACTCCT  445

seq1  ATAGGGTTAAGGAATGTCTCAATAAGCTCTAGGTTGGGTGTAATTGGGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGTTAAGGAATGTCTCAATAAGCTCTAGGTTGGGTGTAATTGGGAA  495

seq1  ATTACACTTCAGTGATTAAATAGCCCATTATATCCTATTTATAATAAGTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACTTCAGTGATTAAATAGCCCATTATATCCTATTTATAATAAGTG  545

seq1  GACACAAACATAAAGCTAACTCTGCTATTGGTAAAGAAGTAGCTGTCACT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAACATAAAGCTAACTCTGCTATTGGTAAAGAAGTAGCTGTCACT  595

seq1  GATTTTAGCCAGAGGACAGACACCATTTTAGATGGCAGAATTATCTTGTG  647
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GATTTTAGCCAGAGGACAGACACCATTTTAGATGGCACAATTATCTTGTG  645

seq1  TTTCCAATCTCAGGAGGATGGTGCCTAATGTTGATATTTTGTGAGGTTAT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATCTCAGGAGGATGGTGCCTAATGTTGATATTTTGTGAGGTTAT  695

seq1  TTATTCCTGATAAGACATTTGGGCCAACCATGAGCATCAAGCCAGCTTTT  747
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTATTCCTGATAAGACATTTGGGCCAACCATGAGCATCAAGCCATCTTTT  745

seq1  GCAAGTTGAAACTCCTAGATCTAGCAGTCAGACCAGTCCTTAGGTGTCAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTGAAACTCCTAGATCTAGCAGTCAGACCAGTCCTTAGGTGTCAA  795

seq1  CAGCTGCTTTGATATTTAGAATGGTTGGTCCTGTCACAGCAGCTACAGGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCTTTGATATTTAGAATGGTTGGTCCTGTCACAGCAGCTACAGGT  845

seq1  ATTTGTGTTCTTTCTGTATGTCATGTAAGGTTGGGCATCTGTCTTCAAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTCTTTCTGTATGTCATGTAAGGTTGGGCATCTGTCTTCAAAT  895

seq1  T--ACCTGCTTCAGCCCTTGTTATCTGAGGGTACATGCTCATGTGGCATC  945
      |   ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTGCTTCAGCCCTTGTTATCTGAGGGTACATGCTCATGTGGCATC  945

seq1  CTTGGGCTTTTGTGACAGTTTTCCCCAACCCTCTATGTTCCC-TAGCTGT  994
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CTTGGGCTTTTGTGACAGTTTTCCCCAACCCTCTATGTTCCCTTAGCTGT  995

seq1  AATGTATTCAGAGATCACAAAGAATTGTACAGTTCTACAGTGTCAACCGT  1044
      |||||||||  ||||||||||||||||||||||||||| ||||||||| |
seq2  AATGTATTCCCAGATCACAAAGAATTGTACAGTTCTACTGTGTCAACCAT  1045

seq1  CACATCTTCCCTGTCTTCTTACTTTACAAAGGGATTGCTTGGTCTGAGAT  1094
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTCCCTGTCTTCTTACTTTACAAAGGGATTGCTTGGTCTGAGAT  1095

seq1  TTTGAATTC  1103
      |||||||||
seq2  TTTGAATTC  1104

seq1: chr4_60841382_60841990
seq2: B6Ng01-182N12.g_272_882

seq1  TCAGTTTTGGAAAAGATTCAATGAGATGCTAAGAAGAAGGTTTTTTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTGGAAAAGATTCAATGAGATGCTAAGAAGAAGGTTTTTTTGTG  50

seq1  TGTGTTTGGGTGAGATGTTCTCTAGATATGTGTAAGGTCCATTTGATTCA  100
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTGTTTTGGTGAGATGTTCTCTAGATATGTGTTAGGTCCATTTGATTCA  100

seq1  TAGCTTCTGTTAGTTTCATTAATTCTCTGCTTACTTTCTATCTCAATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTGTTAGTTTCATTAATTCTCTGCTTACTTTCTATCTCAATGAC  150

seq1  CTATCCATTGTTGAGAGTGGGAACCTCTACCTGTTTGATTGTATCTTCCT  200
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTATCCATTGTTGAGAGTGGGAACCTCCACCTGTTTGATTGTATCTTCCT  200

seq1  GTATTTCTTTAAGGGATTTATTCATTTTTTTCTTTAAAGGCCTCTATCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTATTTCTTTAAGGGATTTATTCATTTTTTTCTTTAAAGGCCTCTATTAT  250

seq1  CTTCATAAGATTGAGTGAATGTCATTTTCTTGTGCTTTACTTGTGTTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAAGATTGAGTGAATGTCATTTTCTTGTGCTTTACTTGTGTTAGG  300

seq1  ATATCCAGGGTTTCTGTAGTAAGATAGCTATGCTCTGAAGATGACGTATT  350
      ||||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  ATATCCAGGGTTTCTGTAGTAAGATAGCTATGCACTGAAGATGGCGTATT  350

seq1  TCATTTGGTCTTGTTGGTTATGTTCTTATGCTGGCCTTTAGTCATCTGGT  400
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCATTTGGTCTTGTTGGCTATGTTCTTATGCTGGCCTTTAGTCATCTGGT  400

seq1  TGTCCCTGGATTTTATAGGTGTAACAGGTATCAGGAGA-TTTGGCCTAAC  449
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTCCCTGGATTTTATAGGTGTAACAGGTATCAGGAGATTTTGGCCTAAC  450

seq1  CTGGATATTCCTGGTGCAGCAGGCCTCTGGTGGGCAGCCTTGGGCTGGAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATATTCCTGGTGCAGCAGGCCTCTGGTGGGCAGCCTTGGGCTGGAC  500

seq1  AATGGATCTCATGTGGCAGGCTCAGAGCAGCTGGTTGTGCCCCAGGTGAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATCTCATGTGGCAGGCTCAGAGCAGCTGGTTGTGCCCCAGGTGAC  550

seq1  ATAGAGGGCAGGAGA-TTTGGGGCAGGAGATAGGGTCTATCCTGTATACT  598
      ||| ||||||||||| |||||||||||| |||||||| |||||| |||||
seq2  ATACAGGGCAGGAGATTTTGGGGCAGGAAATAGGGTCCATCCTGAATACT  600

seq1  CCAAGTACATC  609
      |||||||||||
seq2  CCAAGTACATC  611