BAC Information

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BAC

Clone NameB6Ng01-183A17
Chromosome4 (Build37)
Map Location 87,077,896 - 87,203,797
singlet/doubletdoublet
Overlap genenone
Upstream gene4930500O09Rik, Rraga, 6230416J20Rik, LOC100040388, Adfp, EG624685, Dennd4c, Rps6, Asah3l, Slc24a2
Downstream geneMllt3, BC057079, Ptplad2, Ifnb1, OTTMUSG00000007655
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183A17.bB6Ng01-183A17.g
ACCGA008773GA008774
length677283
definitionB6Ng01-183A17.b B6Ng01-183A17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,203,124 - 87,203,797)(87,077,896 - 87,078,178)
sequence
gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaatcaggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccattttcccggttcggaatcttcct
gagaagcaagcaataaagctcttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaatactgtaactggtgccagaaggg
caaagatcaagcattgactcttccggaggagaggagtataaggcttcagg
gtctcctttcctggaggtgagggatgttctgttctgtcattggagttccg
tttttttctgtcctggactgtgggaactgccacttcgccatgttctactc
accagtcccctttctagagattgaatccattttctcttcctttgctctgg
gcttttccatgcattcaaactgaggagccagctgcatgtagggatgagca
gcagatggaaaggagaggaggcaggtgaagagaactgtggagcctggagc
actaaggttttgcgattaaagtgctttccttttactgaggagggatacaa
agggtggggtgcaggaagtatggtaagggagctggaggggcagatgatgt
caagaggtgtcattaatacgagcccct
ttgtgtttctccttaataattgttacaaacttgatattgcatttgcacca
gtcactattcagttaggacagtaaaacggggcacaaggagagaattagga
agaagacactgtcattctggcaccatttacacatcatatcactacagtaa
gtgtgagcattgttacccacactcaccagagataaagcagaagcttgtat
ttctggtgcacttcgtgagaggagaggataggaggacagaaatgtcctgg
gtgcttaaaaatgattccatccttggaaacatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_87203124_87203797
seq2: B6Ng01-183A17.b_45_721 (reverse)

seq1  AAGGGCTCGTATTAATGACACCACTTGACATCATCTG-CCCTCCAGCTCC  49
      | |||||||||||||||||||| |||||||||||||| ||||||||||||
seq2  AGGGGCTCGTATTAATGACACCTCTTGACATCATCTGCCCCTCCAGCTCC  50

seq1  CTTACCATACTTCCTGCACCCCACCCTTTGTATCCCTCCTCAGTAAA--G  97
      |||||||||||||||||||||||||||||||||||||||||||||||  |
seq2  CTTACCATACTTCCTGCACCCCACCCTTTGTATCCCTCCTCAGTAAAAGG  100

seq1  GAAGCACTTTAATCGCAAAACCTTAGTGCTCCAGGCTCCACAGTTCTCTT  147
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACTTTAATCGCAAAACCTTAGTGCTCCAGGCTCCACAGTTCTCTT  150

seq1  CACCTGCCTCCTCTCCTTTCCATCTGCTGCTCATCCCTACATGCAGCTGG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCCTCCTCTCCTTTCCATCTGCTGCTCATCCCTACATGCAGCTGG  200

seq1  CTCCTCAGTTTGAATGCATGGAAAAGCCCAGAGCAAAGGAAGAGAAAATG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGTTTGAATGCATGGAAAAGCCCAGAGCAAAGGAAGAGAAAATG  250

seq1  GATTCAATCTCTAGAAAGGGGACTGGTGAGTAGAACATGGCGAAGTGGCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAATCTCTAGAAAGGGGACTGGTGAGTAGAACATGGCGAAGTGGCA  300

seq1  GTTCCCACAGTCCAGGACAGAAAAAAACGGAACTCCAATGACAGAACAGA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCACAGTCCAGGACAGAAAAAAACGGAACTCCAATGACAGAACAGA  350

seq1  ACATCCCTCACCTCCAGGAAAGGAGACCCTGAAGCCTTATACTCCTCTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTCACCTCCAGGAAAGGAGACCCTGAAGCCTTATACTCCTCTCC  400

seq1  TCCGGAAGAGTCAATGCTTGATCTTTGCCCTTCTGGCACCAGTTACAGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGGAAGAGTCAATGCTTGATCTTTGCCCTTCTGGCACCAGTTACAGTA  450

seq1  TTGCGTCCCGCTCGACCGGCAAGAAAGACGCAACAAACCAGAATCTTCCG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCGTCCCGCTCGACCGGCAAGAAAGACGCAACAAACCAGAATCTTCCG  500

seq1  CGGCAAGAGCTTTATTGCTTGCTTCTCAGGAAGATTCCGAACCGGGAAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCAAGAGCTTTATTGCTTGCTTCTCAGGAAGATTCCGAACCGGGAAAA  550

seq1  TGGCGCTGCTTTTATAACCCGCAGCGTGACGTTTCAGCACCTGATATGGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCTGCTTTTATAACCCGCAGCGTGACGTTTCAGCACCTGATATGGC  600

seq1  GTGACAGCTCCTGATTCGTTGCTTGCCCATCACCCCACTATTACACCCCG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGCTCCTGATTCGTTGCTTGCCCATCACCCCACTATTACACCCCG  650

seq1  AGAATGGGAGTGACTAGGAGTGAATTC  674
      |||||||||||||||||||||||||||
seq2  AGAATGGGAGTGACTAGGAGTGAATTC  677

seq1: chr4_87077896_87078178
seq2: B6Ng01-183A17.g_71_353

seq1  TTGTGTTTCTTCTTAATAATTGTTACAAACTTGATATTGCATTTGCACCA  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTCTCCTTAATAATTGTTACAAACTTGATATTGCATTTGCACCA  50

seq1  GTCAGTATTCAGTTAGGACAGTAAAACGGGGCACAAGGAGAGAATTAGGA  100
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTATTCAGTTAGGACAGTAAAACGGGGCACAAGGAGAGAATTAGGA  100

seq1  AGAAGACACTGTCATTCTGGCACCATTTACACATCATATCACTACAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACACTGTCATTCTGGCACCATTTACACATCATATCACTACAGTAA  150

seq1  GTGTGAGCATTGTTACCCACACTCACCAGAGATAAAGCAGAAGCTTGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGCATTGTTACCCACACTCACCAGAGATAAAGCAGAAGCTTGTAT  200

seq1  TTCTGGTGCACTTCGTGAGAGGAGAGGAGAGGAGGACAGAAATGTCCTGG  250
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTCTGGTGCACTTCGTGAGAGGAGAGGATAGGAGGACAGAAATGTCCTGG  250

seq1  GTGCTTAGAAATGATTCCATCAATGGAAACATC  283
      ||||||| |||||||||||||  ||||||||||
seq2  GTGCTTAAAAATGATTCCATCCTTGGAAACATC  283