BAC Information

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BAC

Clone NameB6Ng01-183B15
Chromosome4 (Build37)
Map Location 110,026,006 - 110,183,981
singlet/doubletdoublet
Overlap genenone
Upstream geneEps15, LOC666144, 4922503N01Rik, Rnf11, 4930522H14Rik, Cdkn2c, LOC100040307, Faf1, Dmrta2, Elavl4
Downstream geneLOC100040381, 2310026E23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183B15.bB6Ng01-183B15.g
ACCGA008816GA008817
length1,1181,017
definitionB6Ng01-183B15.b B6Ng01-183B15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,182,976 - 110,183,981)(110,026,006 - 110,027,020)
sequence
gaattcctaaagatagcaggaaagttacatccatgatacctcagcaatag
aactggctaagcgagacctgactaatgattatacaaatacacatgccaat
gcaaatggagaaaccctcataggattcccccatttctcaacaaagaacta
caggcaaacactgaatgctgagaaaggtagtattctgcctccccaggaat
ggtctctctaactggatatgcaataccagtggtcagccctgaaagcatac
atatataagcaatactaaatggatccagaacgttgtgtctatatgcatat
gtaacaacaataatcaaagaaaaggaagccatgaagttgaggaagagtaa
gaaaagcaatatgggatcagttggaaggagcaacagaaagggaggagatg
atttaataacattttaagtagaaatttattaatgaaaaatagcaaatagt
ctatctattcaaatcaagcatactcttcctctccttcctttggttacttt
cctcacgaatttcagaagcaaagacctgaaatagatggacttacgagaaa
agatctcttcgtcctcacaactttctaagttctacatcatgatccaccag
gcctctatttcatactgcaagttggaagaccatatgaagttatatctcta
aaagtgtggggtttcatagaatttggcaacagtaaaagagttctaaacac
aggacaacctaaaataaaattgcattcaaatatgcaatgagccaagtgtt
ctgccctatgtttgatgtatcacacaacttcatcccagccttggtgctga
atgcacagctcgcacactttgcattgcacatgctgttacatgcaatgccc
ataaaccctgcacaagacacatcaggttcagagactcaattattttttta
gtatgcattcctttacatacataatggtctgttcttatgaaaacataaag
gatttaattgccggaaaacccaagacttaattatttccctgcccttcatt
tctcagcctaatttaaaattagtaagaagcctttgggtgtgtcttggtgt
tacaaagtttgattttttaatctggagtttctgaactttgaaattcataa
aaatcattcaatgaaatt

gaattccttattagaaagagtactggttattttggaaggtagaattatga
gtggtttttaaatttttttcttttacttattcatactaatgtaaagaaac
ctttatgaaagttaagtatttatttagaactaaaataatcttgtcttgct
gtatcaataaaaatcaatataatggttataaaaatgcctaaaatgaccaa
agcctcttggtaagcgccaggtaaagtctccgtgccatttaacatggaaa
aaaacatggtctcaggaaggcaccatggttagggggtcaaccagacatag
gttcacatctgagatatgtcctctttagagtatatcatctggaacagttg
tttttttctaaagcctaatggtagtagccatattaatagtaatagtgaac
taagaagcacattgtaccgtctcattccatcatcagctgatgtgaaaatg
ctcttaaggagggaagttaaataacttgcctaagtttacacatcaagata
aatacatctgtgtggattaaacacaaaggggtaattttaagcacatttaa
actgccaggtgtatataagaagcagccttatttataatagccagaagctg
gaaagaacccagatgccccacaacagaggaatggatacaaaaaaatgtgg
tacatttacacaatggagtactactcagctattaaaaagaatgaatttat
gaaattcctaggcaaatggttggacctggagggcatcatcctgagtgagg
taacacaatcacaaaagaactcaaatgatatgttctcactgataagtgga
tatttagcccagaaacttagaatacccaagatataagatacaatttgcga
aacacaggaaactcaagaagaacgaagaccaaagtgtggacactttgccc
cttcttagaattgggaacaaaacacccatggaaggagttacagagacaca
gtttggagctgagacaaaaaggatggaccatctagagattgccatattca
ggggtccatccataatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_110182976_110183981
seq2: B6Ng01-183B15.b_126_1147 (reverse)

seq1  TTTTATGAAATTCAA--GTCAGAAACT-CAGATTTAAAAATCAAACTTTG  47
      ||||||||| |||||   ||||||||| |||||| |||||||||||||||
seq2  TTTTATGAATTTCAAAGTTCAGAAACTCCAGATTAAAAAATCAAACTTTG  50

seq1  TAACA-CAAGACACACC--AAAGCT--CTACTAA-TTTAAATTAGGCTGA  91
      ||||| |||||||||||  || |||   |||||| |||||||||||||||
seq2  TAACACCAAGACACACCCAAAGGCTTCTTACTAATTTTAAATTAGGCTGA  100

seq1  GAAATGAA-GGCAGGGAAAT-ATTAAGTCTT-GGTTTTCC-GCAATTAAA  137
      |||||||| ||||||||||| |||||||||| |||||||| |||||||||
seq2  GAAATGAAGGGCAGGGAAATAATTAAGTCTTGGGTTTTCCGGCAATTAAA  150

seq1  TCC-TTATGTTTTCATAAGAACAGACCATTATGTATGTAAAGGAATGCAT  186
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTATGTTTTCATAAGAACAGACCATTATGTATGTAAAGGAATGCAT  200

seq1  ACT-AAAAAATAATTGAGTCTCTGAA-CTGATGTGTCTTGTGCAGGGTTT  234
      ||| |||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACTAAAAAAATAATTGAGTCTCTGAACCTGATGTGTCTTGTGCAGGGTTT  250

seq1  ATGGGCATTGCATGTAACAGCATGTGCAATGCAAAGTGTGCGAGCTGTGC  284
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCATTGCATGTAACAGCATGTGCAATGCAAAGTGTGCGAGCTGTGC  300

seq1  ATTCAGCACCAAGGCTGGGATGAAGTTGTGTGATACATCAAACATAGGGC  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCACCAAGGCTGGGATGAAGTTGTGTGATACATCAAACATAGGGC  350

seq1  AGAACACTTGGCTCATTGCATATTTGAATGCAATTTTATTTTAGGTTGTC  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTTGGCTCATTGCATATTTGAATGCAATTTTATTTTAGGTTGTC  400

seq1  CTGTGTTTAGAACTCTTTTACTGTTGCCAAATTCTATGAAACCCCACACT  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTTAGAACTCTTTTACTGTTGCCAAATTCTATGAAACCCCACACT  450

seq1  TTTAGAGATATAACTTCATATGGTCTTCCAACTTGCAGTATGAAATAGAG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGATATAACTTCATATGGTCTTCCAACTTGCAGTATGAAATAGAG  500

seq1  GCCTGGTGGATCATGATGTAGAACTTAGAAAGTTGTGAGGACGAAGAGAT  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTGGATCATGATGTAGAACTTAGAAAGTTGTGAGGACGAAGAGAT  550

seq1  CTTTTCTCGTAAGTCCATCTATTTCAGGTCTTTGCTTCTGAAATTCGTGA  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTCGTAAGTCCATCTATTTCAGGTCTTTGCTTCTGAAATTCGTGA  600

seq1  GGAAAGTAACCAAAGGAAGGAGAGGAAGAGTATGCTTGATTTGAATAGAT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTAACCAAAGGAAGGAGAGGAAGAGTATGCTTGATTTGAATAGAT  650

seq1  AGACTATTTGCTATTTTTCATTAATAAATTTCTACTTAAAATGTTATTAA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTATTTGCTATTTTTCATTAATAAATTTCTACTTAAAATGTTATTAA  700

seq1  ATCATCTCCTCCCTTTCTGTTGCTCCTTCCAACTGATCCCATATTGCTTT  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTCCTCCCTTTCTGTTGCTCCTTCCAACTGATCCCATATTGCTTT  750

seq1  TCTTACTCTTCCTCAACTTCATGGCTTCCTTTTCTTTGATTATTGTTGTT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACTCTTCCTCAACTTCATGGCTTCCTTTTCTTTGATTATTGTTGTT  800

seq1  ACATATGCATATAGACACAACGTTCTGGATCCATTTAGTATTGCTTATAT  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGCATATAGACACAACGTTCTGGATCCATTTAGTATTGCTTATAT  850

seq1  ATGTATGCTTTCAGGGCTGACCACTGGTATTGCATATCCAGTTAGAGAGA  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGCTTTCAGGGCTGACCACTGGTATTGCATATCCAGTTAGAGAGA  900

seq1  CCATTCCTGGGGAGGCAGAATACTACCTTTCTCAGCATTCAGTGTTTGCC  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCCTGGGGAGGCAGAATACTACCTTTCTCAGCATTCAGTGTTTGCC  950

seq1  TGTAGTTCTTTGTTGAGAAATGGGGGAATCCTATGAGGGTTTCTCCATTT  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTTCTTTGTTGAGAAATGGGGGAATCCTATGAGGGTTTCTCCATTT  1000

seq1  GCATTGGCATGTGTATTTGTAT  1006
      ||||||||||||||||||||||
seq2  GCATTGGCATGTGTATTTGTAT  1022


seq1: chr4_110026006_110027020
seq2: B6Ng01-183B15.g_66_1081

seq1  GAATTCCTTATTAGAAAGAGTACTGGTTATTTTGGAAGGTAGAATTATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTATTAGAAAGAGTACTGGTTATTTTGGAAGGTAGAATTATGA  50

seq1  GTGGTTTTTAAATTTTTTTCTTTTACTTATTCATACTAATGTAAAGAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTTTAAATTTTTTTCTTTTACTTATTCATACTAATGTAAAGAAAC  100

seq1  CTTTATGAAAGTTAAGTATTTATTTAGAACTAAAATAATCTTGTCTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGAAAGTTAAGTATTTATTTAGAACTAAAATAATCTTGTCTTGCT  150

seq1  GTATCAATAAAAATCAATATAATGGTTATAAAAATGCCTAAAATGACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCAATAAAAATCAATATAATGGTTATAAAAATGCCTAAAATGACCAA  200

seq1  AGCCTCTTGGTAAGCGCCAGGTAAAGTCTCCGTGCCATTTAACATGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTTGGTAAGCGCCAGGTAAAGTCTCCGTGCCATTTAACATGGAAA  250

seq1  AAAACATGGTCTCAGGAAGGCACCATGGTTAGGGGGTCAACCAGACATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATGGTCTCAGGAAGGCACCATGGTTAGGGGGTCAACCAGACATAG  300

seq1  GTTCACATCTGAGATATGTCCTCTTTAGAGTATATCATCTGGAACAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACATCTGAGATATGTCCTCTTTAGAGTATATCATCTGGAACAGTTG  350

seq1  TTTTTTTCTAAAGCCTAATGGTAGTAGCCATATTAATAGTAATAGTGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCTAAAGCCTAATGGTAGTAGCCATATTAATAGTAATAGTGAAC  400

seq1  TAAGAAGCACATTGTACCGTCTCATTCCATCATCAGCTGATGTGAAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAGCACATTGTACCGTCTCATTCCATCATCAGCTGATGTGAAAATG  450

seq1  CTCTTAAGGAGGGAAGTTAAATAACTTGCCTAAGTTTACACATCAAGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGGAGGGAAGTTAAATAACTTGCCTAAGTTTACACATCAAGATA  500

seq1  AATACATCTGTGTGGATTAAACACAAAGGGGTAATTTTAAGCACATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATCTGTGTGGATTAAACACAAAGGGGTAATTTTAAGCACATTTAA  550

seq1  ACTGCCAGGTGTATATAAGAAGCAGCCTTATTTATAATAGCCAGAAGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCAGGTGTATATAAGAAGCAGCCTTATTTATAATAGCCAGAAGCTG  600

seq1  GAAAGAACCCAGATGCCCCACAACAGAGGAATGGATACAAAAAAATGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAACCCAGATGCCCCACAACAGAGGAATGGATACAAAAAAATGTGG  650

seq1  TACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTAT  700

seq1  GAAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATCATCCTGAGTGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATCATCCTGAGTGAGG  750

seq1  TAACACAATCACAAAAGAACTCAAATGATATGTTCTCACTGATAAGTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACAATCACAAAAGAACTCAAATGATATGTTCTCACTGATAAGTGGA  800

seq1  TA-TTAGCCCAGAAACTTAGAATACCCAAGATATAAGATACAATTTGCGA  849
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAGCCCAGAAACTTAGAATACCCAAGATATAAGATACAATTTGCGA  850

seq1  AACACAGGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAGGAAACTCAAGAAGAACGAAGACCAAAGTGTGGACACTTTGCCC  900

seq1  CTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTAGAATTGGGAACAAAACACCCATGGAAGGAGTTACAGAGACACA  950

seq1  GTTTGGAGCTGAGAC-AAAAGGATGGACCATCTAGAGATTGCCATATTCA  998
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTTTGGAGCTGAGACAAAAAGGATGGACCATCTAGAGATTGCCATATTCA  1000

seq1  GGGGTCCATCCCATAAT  1015
      ||||||||| |||||||
seq2  GGGGTCCAT-CCATAAT  1016


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