BAC Information

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BAC

Clone NameB6Ng01-183N10
Chromosome4 (Build37)
Map Location 151,756,789 - 151,903,699
singlet/doubletdoublet
Overlap geneChd5, Kcnab2, LOC100042028, Nphp4
Upstream geneCamta1, LOC100041960, Dnajc11, Thap3, Phf13, Klhl21, Zbtb48, Tas1r1, Nol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22
Downstream geneLOC667039, Gm833, LOC100042089, Ajap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183N10.bB6Ng01-183N10.g
ACCGA009363GA009364
length761985
definitionB6Ng01-183N10.b B6Ng01-183N10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,903,098 - 151,903,699)(151,756,789 - 151,757,757)
sequence
gaattcctaaatccaaggattatcctggggggcctaggctcagagctcag
agaaacttctggcaaaaagccagctctgcagaaaacagagctgacaggaa
gggaaagagcacaggggagagccaggaggacagatgggaggatggaccag
gtctcggagacactgagttctgggatcttgcaatgctgcctctggtcttt
ctattacatcagccaatgagattttatctttctttctatcacatcagcca
atgagattccttctttgtctttcatttatttggaaaacaaatcggcttat
ttatccattcccttagctgggcaggagagggtgttttttgtttttttttt
tttttttttttatgcttgactgctgaaaaagtcacagggctgcagagatg
tctccttggttaagagcacttgctgctcaagcatgaagatctgagtttaa
attccagcacccatgagaagaagccaggcagagctgcgtggctgcatccc
agggcagtggaggatggagacagattgctgggtcatactggccaccagag
tccctccaggtccagagagagactctgtggcaagggaagaatctagcaga
gagtcctgcagcagggacctgacactctctggctaaacacatacgttttg
ttgttttccttgtgctaagaattggatttagggaccccacgtgctctgcc
actaagccacattcccagccccacaggcacaatctaaaaattggtgggtg
gggggcatgga
gaattctcccttcatggtgttctgagcttctcggtggtgcgggaggggtg
ccagggcctggaacaggcctccctgttcaggatggaagcaggccgggtgg
ctctccctttacaagggctcatatggtgagcacacagcatccagttgctg
gacagggctttgagtaatgccttctagatagttggtgaacatggcctgtc
ccctccccccagatgaccccaagactgaggagaaggagcccggggagact
cagcaaaacggcgacagagaggaagatgaggaaggcaagaaagaagacaa
aaatgggaaattcaaattcatgttcaacattgcagatggcggtttcacag
gtacagaggcagaacagtagacgggacccggctgtcggtctcacttcctc
actgtggctcccaggagtctgggctggtggtaattttattctgaggtgtg
aatgtttgatgatggtccatcgtatgcccctcttagcaatactggagcaa
tgggcctctgatagccggtgccgagcaagccgggacataagccagggacg
ggggaatctccattctgcttaccttggtctctctcttcagagctgcacac
tctgtggcagaacgaggagcgggcggctgtgtcctcggggaaaatctacg
aaatctggcaccgccgtcacgactactggctgctggcaggcattgtgacg
tatccttgctcagtcaggctgggggggctcctgttcagttttctctgggc
ctcaggggacccacaaatctctaggaggacctctaccctccttctcccag
cttctggtgactgcccaaaacctttggcaggccttctgtgtcttctctgt
catgttctccttgtcattctgggccatctggctgggatgtgccccaaacc
ccgttttcctgacagtcgtgggaattaaggacccccccaccccctttttg
atctggcttgggtaaaggcctggttattaagtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_151903098_151903699
seq2: B6Ng01-183N10.b_206_809 (reverse)

seq1  TCCACTGCCCCCCACCCACCAA-TTTTAGATTGTGCCTGTGGGGCTGGGA  49
      |||| ||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCCA-TGCCCCCCACCCACCAATTTTTAGATTGTGCCTGTGGGGCTGGGA  49

seq1  ATGTGGCTTAGTGGCAGAGCACGTGGGGTCCCTAAATCCAATTCTTAGCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCTTAGTGGCAGAGCACGTGGGGTCCCTAAATCCAATTCTTAGCA  99

seq1  CAAGG-AAACAAC-AAACGTATGTGTTTAGCCAGAGAGTGTCAGGTCCCT  147
      ||||| ||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAAACAACAAAACGTATGTGTTTAGCCAGAGAGTGTCAGGTCCCT  149

seq1  GCTGCAGGACTCTCTGCTAGATTCTTCCCTTGCCACAGAGTCTCTCTCTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGGACTCTCTGCTAGATTCTTCCCTTGCCACAGAGTCTCTCTCTG  199

seq1  GACCTGGAGGGACTCTGGTGGCCAGTATGACCCAGCAATCTGTCTCCATC  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGAGGGACTCTGGTGGCCAGTATGACCCAGCAATCTGTCTCCATC  249

seq1  CTCCACTGCCCTGGGATGCAGCCACGCAGCTCTGCCTGGCTTCTTCTCAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTGCCCTGGGATGCAGCCACGCAGCTCTGCCTGGCTTCTTCTCAT  299

seq1  GGGTGCTGGAATTTAAACTCAGATCTTCATGCTTGAGCAGCAAGTGCTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTGGAATTTAAACTCAGATCTTCATGCTTGAGCAGCAAGTGCTCT  349

seq1  TAACCAAGGAGACATCTCTGCAGCCCTGTGACTTTTTCAGCAGTCAAGCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCAAGGAGACATCTCTGCAGCCCTGTGACTTTTTCAGCAGTCAAGCA  399

seq1  TAAAAAAAAAAAAAAAAAAAAACAAAAAACACCCTCTCCTGCCCAGCTAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAAAAAAAAAAAAACAAAAAACACCCTCTCCTGCCCAGCTAA  449

seq1  GGGAATGGATAAATAAGCCGATTTGTTTTCCAAATAAATGAAAGACAAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATGGATAAATAAGCCGATTTGTTTTCCAAATAAATGAAAGACAAAG  499

seq1  AAGGAATCTCATTGGCTGATGTGATAGAAAGAAAGATAAAATCTCATTGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAATCTCATTGGCTGATGTGATAGAAAGAAAGATAAAATCTCATTGG  549

seq1  CTGATGTAATAGAAAGACCAGAGGCAGCATTGCAAGATCCCAGAACTCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTAATAGAAAGACCAGAGGCAGCATTGCAAGATCCCAGAACTCAG  599

seq1  TGTCT  602
      |||||
seq2  TGTCT  604

seq1: chr4_151756789_151757757
seq2: B6Ng01-183N10.g_69_1053

seq1  GAATTCTCCCTTCATGGTGTTCTGAGCTTCTCGGTGGTGCGGGAGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCTTCATGGTGTTCTGAGCTTCTCGGTGGTGCGGGAGGGGTG  50

seq1  CCAGGGCCTGGAACAGGCCTCCCTGTTCAGGATGGAAGCAGGCCGGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCCTGGAACAGGCCTCCCTGTTCAGGATGGAAGCAGGCCGGGTGG  100

seq1  CTCTCCCTTTACAAGGGCTCATATGGTGAGCACACAGCATCCAGTTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTTTACAAGGGCTCATATGGTGAGCACACAGCATCCAGTTGCTG  150

seq1  GACAGGGCTTTGAGTAATGCCTTCTAGATAGTTGGTGAACATGGCCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGGCTTTGAGTAATGCCTTCTAGATAGTTGGTGAACATGGCCTGTC  200

seq1  CCCTCCCCCCAGATGACCCCAAGACTGAGGAGAAGGAGCCCGGGGAGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCCAGATGACCCCAAGACTGAGGAGAAGGAGCCCGGGGAGACT  250

seq1  CAGCAAAACGGCGACAGAGAGGAAGATGAGGAAGGCAAGAAAGAAGACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAACGGCGACAGAGAGGAAGATGAGGAAGGCAAGAAAGAAGACAA  300

seq1  AAATGGGAAATTCAAATTCATGTTCAACATTGCAGATGGCGGTTTCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGAAATTCAAATTCATGTTCAACATTGCAGATGGCGGTTTCACAG  350

seq1  GTACAGAGGCAGAACAGTAGACGGGACCCGGCTGTCGGTCTCACTTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAGGCAGAACAGTAGACGGGACCCGGCTGTCGGTCTCACTTCCTC  400

seq1  ACTGTGGCTCCCAGGAGTCTGGGCTGGTGGTAATTTTATTCTGAGGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGCTCCCAGGAGTCTGGGCTGGTGGTAATTTTATTCTGAGGTGTG  450

seq1  AATGTTTGATGATGGTCCATCGTATGCCCCTCTTAGCAATACTGGAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGATGATGGTCCATCGTATGCCCCTCTTAGCAATACTGGAGCAA  500

seq1  TGGGCCTCTGATAGCCGGTGCCGAGCAAGCCGGGACATAAGCCAGGGACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCTCTGATAGCCGGTGCCGAGCAAGCCGGGACATAAGCCAGGGACG  550

seq1  GGGGAATCTCCATTCTGCTTACCTTGGTCTCTCTCTTCAGAGCTGCACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAATCTCCATTCTGCTTACCTTGGTCTCTCTCTTCAGAGCTGCACAC  600

seq1  TCTGTGGCAGAACGAGGAGCGGGCGGCTGTGTCCTCGGGGAAAATCTACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGCAGAACGAGGAGCGGGCGGCTGTGTCCTCGGGGAAAATCTACG  650

seq1  AAATCTGGCACCGCCGTCACGACTACTGGCTGCTGGCAGGCATTGTGACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGGCACCGCCGTCACGACTACTGGCTGCTGGCAGGCATTGTGACG  700

seq1  TATCCTTGCTCAGTCAGGCT-GGGGGGCTCCTG-TCAG-TTTCTCTGGGC  747
      |||||||||||||||||||| |||||||||||| |||| |||||||||||
seq2  TATCCTTGCTCAGTCAGGCTGGGGGGGCTCCTGTTCAGTTTTCTCTGGGC  750

seq1  CTCAGGGGACCCAC-AATCTCTAGGAGGACCTCTACCCTCC-TCTCCCAG  795
      |||||||||||||| |||||||||||||||||||||||||| ||||||||
seq2  CTCAGGGGACCCACAAATCTCTAGGAGGACCTCTACCCTCCTTCTCCCAG  800

seq1  CTTCTGGTGACTGCCCAAAACC-TTGGCAGGCC-TCTGTGTC-TCTCTGT  842
      |||||||||||||||||||||| |||||||||| |||||||| |||||||
seq2  CTTCTGGTGACTGCCCAAAACCTTTGGCAGGCCTTCTGTGTCTTCTCTGT  850

seq1  CATGTTCT-CTTGTCA-TCT-GGCCATCTGGCTGGGATGTGCCCC-AACC  888
      |||||||| ||||||| ||| |||||||||||||||||||||||| ||||
seq2  CATGTTCTCCTTGTCATTCTGGGCCATCTGGCTGGGATGTGCCCCAAACC  900

seq1  CCG-TTTCCTGACAGTCGTTGG-ATTTAGGACCCCCCCACCCCC-TTTTG  935
      ||| ||||||||||||||| || ||| ||||||||||||||||| |||||
seq2  CCGTTTTCCTGACAGTCGTGGGAATTAAGGACCCCCCCACCCCCTTTTTG  950

seq1  ATCATGCTTGGATAAA-GCCATGTTATTAAGTTTT  969
      |||  |||||| |||| |||  |||||||||||||
seq2  ATCTGGCTTGGGTAAAGGCCTGGTTATTAAGTTTT  985