BAC Information

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BAC

Clone NameB6Ng01-184A14
Chromosome4 (Build37)
Map Location 93,958,078 - 93,959,123
singlet/doubletsinglet
Overlap genenone
Upstream geneTusc1
Downstream gene5830433M19Rik, Plaa, LOC667250, Lrrc19, Ift74, Tek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184A14.bB6Ng01-184A14.g
ACCGA009513GA009514
length1,0441,186
definitionB6Ng01-184A14.b B6Ng01-184A14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagcatttacagggttaaggttacagctgctaggcatgtctgctg
ggatataaagaagttggcatgttggccttttgtttggagttgagaactgt
taaccaggcaattattattgtctttaattcattcaaggctctcctttggg
aacatttgggccccttctatttggagaagagctcaaaaagcaaaacccta
actggacatatgtcttttccattttagctaatatggtccaaagaaacagt
gaatacaaagtgtcaagtcccttaggatgggttttaacaattttctatgg
aatttggaaataccactaatatagttacattttaaaatagatgaaaggtg
atctgttgatttgaacatggttggcaccctaatcatcaaagcactagaat
tcaaatcatgtattttcttctgttttttcaaataattccttagccacagt
cagtgagtggcatttgtgcttgtgagtcccagagccatggtgattttagg
gatactcaaggccacacacatttgaaggttgtttagaaaaatacacagga
cctatgtagtttgaatcttagttcaagttcattgtggagaaaggacatgt
gattcaaccatcataggaaaggcaggtgactgcagagagataccaatgct
gtttctctttccatgaggcttgtcaaaggagtgctcatgtgttctactct
ggagaagaagtaatcatatcctgagaaccaccctgtctcctcaaggagcc
aggacaactatggaccactttgtggcattgtgattgagacagtgaacaag
gagacagcatctaaagcaagactgtttaattatgcatatatatctgtatc
attcctttggacccaattcttctatttcaggctcaagttcatacagttta
ctcctcaattacaaaatttatgtccactcaacccctctgttcaccttccc
aacatggccacgaattctcttctgcttttatgatcatctgtttccctgtg
tgttgcccgcgcgcgcgcgtgcgtgtgtgtgtgtgtgtgtgttt

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctta
gaaaattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaaaaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaaattcctagccaaatggatgg
acctggagggcatcatcctgagtgaggtaacacattcacaaaggaactca
cacaatatgtactcactgataagtggatattagcccaaaacctaggatac
ccaagatataagatacaatttcctaaacacatgaaactcaagaaaaatga
agactgaagtgtggacactatgcccctccttagaagagggaacaaaacac
ccttggaaggagttacagagacaaagtttggagctgagatgaaaggatgg
accacgtagagactgccatatccagggatccaccccataatcagcatcca
aacgctgacaccattgcatacactagcaagattttatcgaaaggacccag
atgtagctgtctcttgtgagactatgcccggggcctagcaaacacagaag
tggatgctcacagtcagctaatggatggatcacagggctcccaatggagg
agctagagaaagtacctaaaggagctaagggatctgcaaccctataggtg
gacacattatgactaaccagtacccggagctctggactctagctgcatat
gtatcaaaagatggtctaatcggcaatcactggtaaagaggaggcccatt
tgaccgcaactttatattcccaatacatggaacgcaagtcagaggcgcag
tggctggtaatgaggacatgcgtagtactgtagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93958078_93959123
seq2: B6Ng01-184A14.b_47_1090 (reverse)

seq1  ACACACACACACACACACACACGCACGCGCGCGCGCGCGCAAACACACAG  50
      | ||||||||||||||||||||||||||||||||||| || |||||||||
seq2  AAACACACACACACACACACACGCACGCGCGCGCGCGGGC-AACACACAG  49

seq1  GGAAACAGATGATCATAAAAAGCAGAAGAGAATTCGTGGCCATGTTGGGA  100
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGAAACAGATGATCAT-AAAAGCAGAAGAGAATTCGTGGCCATGTTGGGA  98

seq1  AGGTGAACAGAGGGGTTGAGTGGACATAAATTTTTGTAATTGAGGAGT-A  149
      |||||||||||||||||||||||||||||| ||||||||||||||||| |
seq2  AGGTGAACAGAGGGGTTGAGTGGACATAAA-TTTTGTAATTGAGGAGTAA  147

seq1  ACTGTATGAACTTGAGCCTGAAATAGAAGAATTGGGTCCAAAGGAATGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATGAACTTGAGCCTGAAATAGAAGAATTGGGTCCAAAGGAATGAT  197

seq1  ACAGATATATATGCATAATTAAACAGTCTTGCTTTAGATGCTGTCTCCTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATATATATGCATAATTAAACAGTCTTGCTTTAGATGCTGTCTCCTT  247

seq1  GTTCACTGTCTCAATCACAATGCCACAAAGTGGTCCATAGTTGTCCTGGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTGTCTCAATCACAATGCCACAAAGTGGTCCATAGTTGTCCTGGC  297

seq1  TCCTTGAGGAGACAGGGTGGTTCTCAGGATATGATTACTTCTTCTCCAGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGAGGAGACAGGGTGGTTCTCAGGATATGATTACTTCTTCTCCAGA  347

seq1  GTAGAACACATGAGCACTCCTTTGACAAGCCTCATGGAAAGAGAAACAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAACACATGAGCACTCCTTTGACAAGCCTCATGGAAAGAGAAACAGC  397

seq1  ATTGGTATCTCTCTGCAGTCACCTGCCTTTCCTATGATGGTTGAATCACA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTATCTCTCTGCAGTCACCTGCCTTTCCTATGATGGTTGAATCACA  447

seq1  TGTCCTTTCTCCACAATGAACTTGAACTAAGATTCAAACTACATAGGTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTCTCCACAATGAACTTGAACTAAGATTCAAACTACATAGGTCC  497

seq1  TGTGTATTTTTCTAAACAACCTTCAAATGTGTGTGGCCTTGAGTATCCCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTTTTCTAAACAACCTTCAAATGTGTGTGGCCTTGAGTATCCCT  547

seq1  AAAATCACCATGGCTCTGGGACTCACAAGCACAAATGCCACTCACTGACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACCATGGCTCTGGGACTCACAAGCACAAATGCCACTCACTGACT  597

seq1  GTGGCTAAGGAATTATTTGAAAAAACAGAAGAAAATACATGATTTGAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTAAGGAATTATTTGAAAAAACAGAAGAAAATACATGATTTGAATT  647

seq1  CTAGTGCTTTGATGATTAGGGTGCCAACCATGTTCAAATCAACAGATCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGCTTTGATGATTAGGGTGCCAACCATGTTCAAATCAACAGATCAC  697

seq1  CTTTCATCTATTTTAAAATGTAACTATATTAGTGGTATTTCCAAATTCCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATCTATTTTAAAATGTAACTATATTAGTGGTATTTCCAAATTCCA  747

seq1  TAGAAAATTGTTAAAACCCATCCTAAGGGACTTGACACTTTGTATTCACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAATTGTTAAAACCCATCCTAAGGGACTTGACACTTTGTATTCACT  797

seq1  GTTTCTTTGGACCATATTAGCTAAAATGGAAAAGACATATGTCCAGTTAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTGGACCATATTAGCTAAAATGGAAAAGACATATGTCCAGTTAG  847

seq1  GGTTTTGCTTTTTGAGCTCTTCTCCAAATAGAAGGGGCCCAAATGTTCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGCTTTTTGAGCTCTTCTCCAAATAGAAGGGGCCCAAATGTTCCC  897

seq1  AAAGGAGAGCCTTGAATGAATTAAAGACAATAATAATTGCCTGGTTAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAGAGCCTTGAATGAATTAAAGACAATAATAATTGCCTGGTTAACA  947

seq1  GTTCTCAACTCCAAACAAAAGGCCAACATGCCAACTTCTTTATATCCCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCAACTCCAAACAAAAGGCCAACATGCCAACTTCTTTATATCCCAG  997

seq1  CAGACATGCCTAGCAGCTGTAACCTTAACCCTGTAAATGCTGAATTC  1046
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATGCCTAGCAGCTGTAACCTTAACCCTGTAAATGCTGAATTC  1044


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