BAC Information

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BAC

Clone NameB6Ng01-184C10
Chromosome4 (Build37)
Map Location 8,914,840 - 8,915,945
singlet/doubletsinglet
Overlap genenone
Upstream geneCar8, LOC100039494, LOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782
Downstream geneLOC100039584, 4933402J24Rik, Asph, Gdf6, 4930448K20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184C10.bB6Ng01-184C10.g
ACCGA009597GA009598
length1,1971,112
definitionB6Ng01-184C10.b B6Ng01-184C10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
atagccaacatcaaagtaaatggtgagaagctggaagcaattccactaaa
atcagggactagacagggctgtccactctcgccctacctattcaacattg
tacttgaagtcctagccagagcaattagacaacaaaaggagatcaagggg
atacaaattggaaaggaagaagtcaaaatatcactttttgcagacgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaagcc
tgatcaacagcttcaatgaagtagctggatataaaattaactcacacaag
tcaatggcctttctgtatacaaaggataaacaggctgagaaagaaattaa
ggaaacaacacccttctcaatagtcacaaataatataaaataccttggcg
tgactctaactaaggaagtgaaagatctgtatgataagaacttcaagtct
ctaaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgcaaaaatggctatcttgccaaaag
tcatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaagggcaatcggcatattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaaaaacctctggtggaatca
ccatgctggacctaaaactgtactacagagcaattgtgatcaaaactgca
tggtactggtatagtgacagacaagtagaccaatggaacagaattgaaga
cccagagatgaacccacacacctatggtcacttgatctttgacaagggag
ctaaaaccatccagtggaaaaagacagcattttcacaatggtgctggcac
aactggcggtattatgtagaagaatgtgaattgatccattctatctcctt
gtactaaggtcaatctagtggatagactccacataaaaccagagacactg
aactatagaggagaagtaggaaagcctcagaatatggttactggaaaatc
tgaaatggacagcaatgcttgtgctggtagaatcagatcgatatgggact
caaattgcagttgcaagccaaagacacccggttccatttgagaggac
gaattcctcccctcgggacttaagcattagatgaatgctcttcctctggc
atttagacattgttcagctcacagggggatgtgccaccagatgacccctc
aaggtcatggcccagagactaattttgtcatataagtgacactggcattc
taagagtgatttagcagccgcaggcataattaccgactgtgattttagag
gcgttctgtgctttgggtctcaatgttatttatcatgcgtgttgttttaa
ttaatatgtcacgtgtgtgccaacatttgaggcagacttcactctgactc
atgcaggcagagcattgtttgcacagtggtattgttttctggggtgcagc
tggtttccctcctccatattggggtgagccaggaagccaccccttaccac
agctagccttgatgcagtggacaaccactgtgtcttagacctcttgccag
ggagagattgttccactatcagaaggaagtggagatgcccacagaagggg
gattcggaagcagaattaagcagaaagaaggttcataagatatggtgctc
aaggcagcctctgaaaaggttccgggcatccggaaaccttttctgtcgtc
tgttatttatatatgtgccaacagtaggcaacccttgatggcccaatgct
cagagcacagggggcccagaggtcctgcgacctctccttgtcttcctggg
agggctgatcactctttcccagagggttagaaaagagttttgtctttctg
gaaagaagacttctagctgaagcagcgctcaggacagctcactcggctgc
agttccagcctcgggagcacctcagcctcctctcagcatttccggaactc
cgcctacttctgccggaaggcagacagggtgtgataactcctgaggcaat
cccttttgttacttggacagtttttccatcagagtatctgtacctctctc
tgatgtggcacttcatgcccctgtgttgtgttcagagttaaaacactaaa
aggtttatcccaccgtcactagttctgctcatattttaaaggttaacggc
tatgggctttcatgtaaggtcctatataaaggtctaagcacatgcagagc
atggtgactcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_8914840_8915945
seq2: B6Ng01-184C10.g_65_1176

seq1  GAATTCCTCCCCTCGGGACTTAAGCATTAGATGAATGCTCTTCCTCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCCCTCGGGACTTAAGCATTAGATGAATGCTCTTCCTCTGGC  50

seq1  ATTTAGACATTGTTCAGCTCACAGGGGGATGTGCCACCAGATGACCCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGACATTGTTCAGCTCACAGGGGGATGTGCCACCAGATGACCCCTC  100

seq1  AAGGTCATGGCCCAGAGACTAATTTTGTCATATAAGTGACACTGGCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATGGCCCAGAGACTAATTTTGTCATATAAGTGACACTGGCATTC  150

seq1  TAAGAGTGATTTAGCAGCCGCAGGCATAATTACCGACTGTGATTTTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTGATTTAGCAGCCGCAGGCATAATTACCGACTGTGATTTTAGAG  200

seq1  GCGTTCTGTGCTTTGGGTCTCAATGTTATTTATCATGCGTGTTGTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTCTGTGCTTTGGGTCTCAATGTTATTTATCATGCGTGTTGTTTTAA  250

seq1  TTAATATGTCACGTGTGTGCCAACATTTGAGGCAGACTTCACTCTGACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATGTCACGTGTGTGCCAACATTTGAGGCAGACTTCACTCTGACTC  300

seq1  ATGCAGGCAGAGCATTGTTTGCACAGTGGTATTGTTTTCTGGGGTGCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGCAGAGCATTGTTTGCACAGTGGTATTGTTTTCTGGGGTGCAGC  350

seq1  TGGTTTCCCTCCTCCATATTGGGGTGAGCCAGGAAGCCACCCCTTACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCCCTCCTCCATATTGGGGTGAGCCAGGAAGCCACCCCTTACCAC  400

seq1  AGCTAGCCTTGATGCAGTGGACAACCACTGTGTCTTAGACCTCTTGCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCCTTGATGCAGTGGACAACCACTGTGTCTTAGACCTCTTGCCAG  450

seq1  GGAGAGATTGTTCCACTATCAGAAGGAAGTGGAGATGCCCACAGAAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATTGTTCCACTATCAGAAGGAAGTGGAGATGCCCACAGAAGGGG  500

seq1  GATTCGGAAGCAGAATTAAGCAGAAAGAAGGTTCATAAGATATGGTGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCGGAAGCAGAATTAAGCAGAAAGAAGGTTCATAAGATATGGTGCTC  550

seq1  AAGGCAGCCTCTGAAAAGGTTCCGGGCATCCGGAAACCTTTTCTGTCGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGCCTCTGAAAAGGTTCCGGGCATCCGGAAACCTTTTCTGTCGTC  600

seq1  TGTTATTTATATATGTGCCAACAGTAGGCAACCCTTGATGGCCCAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTATATATGTGCCAACAGTAGGCAACCCTTGATGGCCCAATGCT  650

seq1  CAGAGCACAGGGGGCCCAGAGGTCCTGCGACCTCTCCTTGTCTTCCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCACAGGGGGCCCAGAGGTCCTGCGACCTCTCCTTGTCTTCCTGGG  700

seq1  AGGGCTGATCACTCTTTCCCAGAGGGTTAGAAAAGAGTTTTGTCTTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGATCACTCTTTCCCAGAGGGTTAGAAAAGAGTTTTGTCTTTCTG  750

seq1  GAAAGAAGACTTCTAGCTGAAGCAGCGCTCAGGACAGCTCACTCGGCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAGACTTCTAGCTGAAGCAGCGCTCAGGACAGCTCACTCGGCTGC  800

seq1  AGTTCCAGCCTCGGGAGCACCTCAGCCTCCTCTCAGCATTTCCGGAACTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGCCTCGGGAGCACCTCAGCCTCCTCTCAGCATTTCCGGAACTC  850

seq1  CGCCTACTTCTGCCGGAAGGCAGACAGGGTGTGATAACTCCTGAGGCAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTACTTCTGCCGGAAGGCAGACAGGGTGTGATAACTCCTGAGGCAAT  900

seq1  -CCTTTTGTTACTTGGACAG-TTTTCCATCAGAGTATCTGTACCTCTCTC  948
       ||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CCCTTTTGTTACTTGGACAGTTTTTCCATCAGAGTATCTGTACCTCTCTC  950

seq1  TGATGTGGCACTTCATGCCCCTGTGTTTGTGTTCAGAGTTAAAACACT-A  997
      ||||||||||||||||||||||||| |||||||||||||||||||||| |
seq2  TGATGTGGCACTTCATGCCCCTGTG-TTGTGTTCAGAGTTAAAACACTAA  999

seq1  AAGGTTTATCCCACCGTCACCTAGTTCTGCTCATATTTTAAA-GTTAAC-  1045
      ||||||||||||||||||| |||||||||||||||||||||| |||||| 
seq2  AAGGTTTATCCCACCGTCA-CTAGTTCTGCTCATATTTTAAAGGTTAACG  1048

seq1  GCTATGGGCTTCCATGTAAGGTCCTAT---AAGGTCTAAGCCACATGCAG  1092
      ||||||||||| |||||||||||||||   |||||||||| |||||||||
seq2  GCTATGGGCTTTCATGTAAGGTCCTATATAAAGGTCTAAG-CACATGCAG  1097

seq1  AGCAT-GTGACTCGA  1106
      ||||| |||||||||
seq2  AGCATGGTGACTCGA  1112