BAC Information

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BAC

Clone NameB6Ng01-184D04
Chromosome4 (Build37)
Map Location 55,723,970 - 55,725,112
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC384018, EG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184D04.bB6Ng01-184D04.g
ACCGA009633GA009634
length1,2401,156
definitionB6Ng01-184D04.b B6Ng01-184D04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaagaagtggactccagtcccattgaagaaatggatgtgttag
aaaagttaaggcaaggagccaaagagcaaaagcttccttcttctatgtcc
ttatatagacttccagcaaaaggtgaaacctagactaaaggtgtgccttc
ctacttcaagatcagaatcaaaggtgtatcttttcctaccacaaaggtgc
agactagaagtggagtcacccacttcaaaccaacccccccccaaaaaaat
ctctaacaattgtgccctacatttgtggattgtagttctttccagatata
gtcaagttgacaacctatagtagccatcacaagtccaccctttatcttct
tgatacacaatcatatctcctcatgtcatgaataatttccaaatgaaaac
aataaccatgtaataataacaaacaaaatatgactatcccacatacaatc
ataagagcattatatgtttaaccaggtcataattatatctaacagtatat
aactatccctaatacaactattaatgcactataaatttagaatagatagc
aatgtcactgggggacattcttttagtatctcaaatttaagtatgattac
cactgatattcttttaacttatgttacaacatgtgataatgaaattgaaa
gaaaacacaaatatctgtacaaacgtattcttaatagatacggcagaagc
acttatttactgtaatgctcatttctgcaactggccacatggcctaaagc
ttgtatttataactaccttcctctactaccaattctgtattacccccact
ctcagcaagcaggtcttggctcttttcctggaggagtgacccatacctcc
ataccagtgatgggtctgtgctctttgtcatcctgcctggattaggttgt
agtagtctcccattgactttaatcacaggacatggtagcaccaagagatg
acttaaagcatctcctacactggaggacatgacttctctcgcctcgatgt
gaagaagcaatccaatttcccctttgtaatctgggattcattgacttctt
ccaaagaactgatatcagaggcaggactattctttccccttgagattaaa
agcaaatgataattatttcattttctatgcctgatttaatggaataggct
gccgagagatacaataacctgtgcagatgaagcaggcagagaacagaagg
tggtacgaacctcctatagagtctctaatttggggaaact

gaattcactcattcatccattcactcgttcgcccaactaactttagagaa
tacttggctatttgctggatatcatgttgctgttggtggttcaaagctcc
acatcaccgccagcaagattctagagaaagaaccaactagaaagagctaa
gactgtggccaatgtgtgcttgggttccaggatggtgactctaacaagta
ataagaagcttctgacagtttggaggagtcaaaagactggggagtggttt
gaaaggatgagctggggttccttgggaagtgtagtgttccctgcttgaga
ccataggaagctcagaggcttgccaagacctagaatcttctagaaacact
ggaggacaacgggcagagaagtcctgggaccaggtgagagcaagagtgtg
gagaaaccatgagaagatagggaagtcgaagcagggagtcctggtggctg
aggttgggaaatcggaaggtcattttatccgcaaagccctctccagagtg
caacaactgtcatagtttatgtttaactcactctgggttgccaagagttt
aattgagattaattgactgacagccctataaagccagggattgtctgctc
aaggtcacacagctagcacatggaagagttgccttaggcacacatgagct
atgtgtctcaaaccatgctctaaactctaaacccttgcagcacagcagaa
gatgggcagagacaacccttccatagcccacagtgtctgtgggtcccagt
tcccagcattcagcttcggtctctagggtttcattgtcacagtgttttgt
tcactcttgcagatgccgctgctgttatcactcccagcagtctggagctg
ttgttcctcagtgtgctttcagtgttgcgtgacctgaggatgccatgtgt
cagtcttgcctaaggagcccctccccaacccactgtcgccaatgtctccc
actgtgccttcagctgctcgtgttttgaagataccagaacgccactcctt
gaatcctggtgtggctaagttcagttcccggcctgtaccagtgaagaaga
aattcggcagaacccatatgttgttgtcagtgtaagttatggagccattg
tccctatctgggatctgcccacagaacctgaaatcatgagcatgtgcctg
gaactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_55723970_55725112
seq2: B6Ng01-184D04.g_68_1223

seq1  GAATTCACTCATTCATCCATTCACTCGTTCGCCCAACTAACTTTAGAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCATTCATCCATTCACTCGTTCGCCCAACTAACTTTAGAGAA  50

seq1  TACTTGGCTATTTGCTGGATATCATGTTGCTGTTGGTGGTTCAAAGCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGCTATTTGCTGGATATCATGTTGCTGTTGGTGGTTCAAAGCTCC  100

seq1  ACATCACCGCCAGCAAGATTCTAGAGAAAGAACCAACTAGAAAGAGCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCACCGCCAGCAAGATTCTAGAGAAAGAACCAACTAGAAAGAGCTAA  150

seq1  GACTGTGGCCAATGTGTGCTTGGGTTCCAGGATGGTGACTCTAACAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGGCCAATGTGTGCTTGGGTTCCAGGATGGTGACTCTAACAAGTA  200

seq1  ATAAGAAGCTTCTGACAGTTTGGAGGAGTCAAAAGACTGGGGAGTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAGCTTCTGACAGTTTGGAGGAGTCAAAAGACTGGGGAGTGGTTT  250

seq1  GAAAGGATGAGCTGGGGTTCCTTGGGAAGTGTAGTGTTCCCTGCTTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGATGAGCTGGGGTTCCTTGGGAAGTGTAGTGTTCCCTGCTTGAGA  300

seq1  CCATAGGAAGCTCAGAGGCTTGCCAAGACCTAGAATCTTCTAGAAACACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGGAAGCTCAGAGGCTTGCCAAGACCTAGAATCTTCTAGAAACACT  350

seq1  GGAGGACAACGGGCAGAGAAGTCCTGGGACCAGGTGAGAGCAAGAGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGACAACGGGCAGAGAAGTCCTGGGACCAGGTGAGAGCAAGAGTGTG  400

seq1  GAGAAACCATGAGAAGATAGGGAAGTCGAAGCAGGGAGTCCTGGTGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCATGAGAAGATAGGGAAGTCGAAGCAGGGAGTCCTGGTGGCTG  450

seq1  AGGTTGGGAAATCGGAAGGTCATTTTATCCGCAAAGCCCTCTCCAGAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGGAAATCGGAAGGTCATTTTATCCGCAAAGCCCTCTCCAGAGTG  500

seq1  CAACAACTGTCATAGTTTATGTTTAACTCACTCTGGGTTGCCAAGAGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACTGTCATAGTTTATGTTTAACTCACTCTGGGTTGCCAAGAGTTT  550

seq1  AATTGAGATTAATTGACTGACAGCCCTATAAAGCCAGGGATTGTCTGCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGATTAATTGACTGACAGCCCTATAAAGCCAGGGATTGTCTGCTC  600

seq1  AAGGTCACACAGCTAGCACATGGAAGAGTTGCCTTAGGCACACATGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCACACAGCTAGCACATGGAAGAGTTGCCTTAGGCACACATGAGCT  650

seq1  ATGTGTCTCAAACCATGCTCTAAACTCTAAACCCTTGCAGCACAGCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCTCAAACCATGCTCTAAACTCTAAACCCTTGCAGCACAGCAGAA  700

seq1  GATGGGCAGAGACAA-CCTTCCATAGCCCACAGTGTCTGTGGGTCCCAGT  749
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GATGGGCAGAGACAACCCTTCCATAGCCCACAGTGTCTGTGGGTCCCAGT  750

seq1  TCCCAGCATTCAGCTTCGGTCTCTAGGGTTTCATTGTCACAGTGTTTTGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCATTCAGCTTCGGTCTCTAGGGTTTCATTGTCACAGTGTTTTGT  800

seq1  TCACTCTTGCAGATGCCGCTGCTGTTATCACTCCCAGCAGTCTGGAGCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTTGCAGATGCCGCTGCTGTTATCACTCCCAGCAGTCTGGAGCTG  850

seq1  TTGTTCCTCAGTGTGCTTTCAGTGTTGCGTGACCTGAGGATGCCATGTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCTCAGTGTGCTTTCAGTGTTGCGTGACCTGAGGATGCCATGTGT  900

seq1  CAGTCTTGCCTAAGGAGCCCCTCCCCCAACCCACTGTCGCCAATGTCTCC  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CAGTCTTGCCTAAGGAGCCCCT-CCCCAACCCACTGTCGCCAATGTCTCC  949

seq1  CACTGTGCCTCCAGCTGCTCGTG-TTTGAAGATACCAGAACG-CACTC--  995
      |||||||||| |||||||||||| |||||||||||||||||| |||||  
seq2  CACTGTGCCTTCAGCTGCTCGTGTTTTGAAGATACCAGAACGCCACTCCT  999

seq1  TGAATCCT-GTGT-GCTAAG-TCAGTT-CCGGGCTGTACCAGTGAAGAAG  1041
      |||||||| |||| |||||| |||||| |||| |||||||||||||||||
seq2  TGAATCCTGGTGTGGCTAAGTTCAGTTCCCGGCCTGTACCAGTGAAGAAG  1049

seq1  AAA-TCGGCAGAA-CCATATGTTG-TGTCAGTGTAAGTAAT-GAGGCA-T  1086
      ||| ||||||||| |||||||||| ||||||||||||| || ||| || |
seq2  AAATTCGGCAGAACCCATATGTTGTTGTCAGTGTAAGTTATGGAGCCATT  1099

seq1  GT-CCTATCTTGGATCTGCCCACAAGACCTGGTATCTCATGAGCATGTG-  1134
      || ||||||| |||||||||||||  |||||  |  ||||||||||||| 
seq2  GTCCCTATCTGGGATCTGCCCACAGAACCTG--AAATCATGAGCATGTGC  1147

seq1  CTGGAACTG  1143
      |||||||||
seq2  CTGGAACTG  1156


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