BAC Information

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BAC

Clone NameB6Ng01-184F17
Chromosome4 (Build37)
Map Location 101,338,495 - 101,339,138
singlet/doubletsinglet
Overlap genenone
Upstream geneCachd1, LOC100039747, Raver2, Jak1, E130102H24Rik, Ak3l1, LOC669460, Dnajc6, Leprot
Downstream geneLepr, B020004J07Rik, LOC665362, C130073F10Rik, LOC384033, LOC381535, LOC332923, LOC100039834, LOC381536, LOC433739, Pde4b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184F17.bB6Ng01-184F17.g
ACCGA009755GA009756
length1,209644
definitionB6Ng01-184F17.b B6Ng01-184F17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcaacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaatgaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggct
tgactctaactaaggaagtgaaaaatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatggaatccccatcaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaggggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacactgggttgttatcatgtagaagaatgcgaatcgatccacacttatc
tcttgtactaaggtcaaatctaaatggatcaagaactcacataaaccaga
gacactgactatagagggagaagtgggggaaagcccttggagatatgggc
acagggaaaaattcctgaccgaacagcaatgcctgtgcctgtagatcgaa
tgaccattgggaacctaatgaaacttcaaggtttctgcaggcaaagaaga
cacccctta
gaattctctagaaagcacatacactattttttcacaggtagacctgtgca
aagaggttccagtttgtgccagctgacttcttttgtgttaattttttaag
aataaaaatgtcaaatatttgtgtgtaatgtgtgtgcttctttgtgagga
taattgtggctacacacattccaggacgcactggagatcaaagaacgatt
tcaatctcctagttggccaaggggcttccagacagtcttctgtgcctgca
tctcatctcttgctagaagcactagaattacggatgggtgctgctgagcc
catctttatgtgggtctgtgtgtggcttatgaagatttgatctcaagttt
tcatgttacataacaagcacatcttctcagccttcttatattaatcttga
tccctcttttcccacccttattgtcttagtccataaactaatatgcaaaa
aattatctgaaacgatgtttaatctttatatgccatcttgactgggtggt
gggtgctttggatgtgtcagtgaaacatttgtggatgatattaacatttg
gctaatttttcccagggaagtagatttcctactccagagtgtatgggctt
catccaaacactgatgaactgaaagagggagagggggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_101338495_101339138
seq2: B6Ng01-184F17.g_67_710

seq1  GAATTCTCTAGAAAGCACATACACTATTTTTTCACAGGTAGACCTGTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGAAAGCACATACACTATTTTTTCACAGGTAGACCTGTGCA  50

seq1  AAGAGGTTCCAGTTTGTGCCAGCTGACTTCTTTTGTGTTAATTTTTTAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTTCCAGTTTGTGCCAGCTGACTTCTTTTGTGTTAATTTTTTAAG  100

seq1  AATAAAAATGTCAAATATTTGTGTGTAATGTGTGTGCTTCTTTGTGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAATGTCAAATATTTGTGTGTAATGTGTGTGCTTCTTTGTGAGGA  150

seq1  TAATTGTGGCTACACACATTCCAGGACGCACTGGAGATCAAAGAACGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTGGCTACACACATTCCAGGACGCACTGGAGATCAAAGAACGATT  200

seq1  TCAATCTCCTAGTTGGCCAAGGGGCTTCCAGACAGTCTTCTGTGCCTGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTCCTAGTTGGCCAAGGGGCTTCCAGACAGTCTTCTGTGCCTGCA  250

seq1  TCTCATCTCTTGCTAGAAGCACTAGAATTACGGATGGGTGCTGCTGAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATCTCTTGCTAGAAGCACTAGAATTACGGATGGGTGCTGCTGAGCC  300

seq1  CATCTTTATGTGGGTCTGTGTGTGGCTTATGAAGATTTGATCTCAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTATGTGGGTCTGTGTGTGGCTTATGAAGATTTGATCTCAAGTTT  350

seq1  TCATGTTACATAACAAGCACATCTTCTCAGCCTTCTTATATTAATCTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTACATAACAAGCACATCTTCTCAGCCTTCTTATATTAATCTTGA  400

seq1  TCCCTCTTTTCCCACCCTTATTGTCTTAGTCCATAAACTAATATGCAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCTTTTCCCACCCTTATTGTCTTAGTCCATAAACTAATATGCAAAA  450

seq1  AATTATCTGAAACGATGTTTAATCTTTATATGCCATCTTGACTGGGTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTGAAACGATGTTTAATCTTTATATGCCATCTTGACTGGGTGGT  500

seq1  GGGTGCTTTGGATGTGTCAGTGAAACATTTGTGGATGATATTAACATTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTTTGGATGTGTCAGTGAAACATTTGTGGATGATATTAACATTTG  550

seq1  GCTAATTTTTCCCAGGGAAGTAGATTTCCTACTCCAGAGTGTATGGGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTTTTCCCAGGGAAGTAGATTTCCTACTCCAGAGTGTATGGGCTT  600

seq1  CATCCAAACACTGATGAACTGAAAGAGGGAGAGGGGGAGGGAGG  644
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAAACACTGATGAACTGAAAGAGGGAGAGGGGGAGGGAGG  644