BAC Information

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BAC

Clone NameB6Ng01-184G06
Chromosome4 (Build37)
Map Location 119,766,611 - 119,887,479
singlet/doubletdoublet
Overlap geneHivep3, Edn2
Upstream geneSlc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12, BC057371, LOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b
Downstream geneFoxo6, Scmh1, Slfnl1, Ctps, EG667063, Cited4, Kcnq4, Nfyc, Rims3, LOC626489, 3110037I16Rik, Zfp69, Smap1l, Col9a2, Zmpste24, Tmco2, LOC100042174, Rlf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-184G06.bB6Ng01-184G06.g
ACCGA009781GA009782
length1,108373
definitionB6Ng01-184G06.b B6Ng01-184G06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,766,611 - 119,767,728)(119,887,101 - 119,887,479)
sequence
gaattcaagggcagaagagggccgccccagcatccattgtggcatctctc
cggcccggactagggatgacaggcccatggacatggatgtctccgacctt
cagctgttcatatagcacacaggggactcgtgggggccgcttgtcaccca
aacccactcaatggcaatactgacatcttccaggctgttttcaagacagg
cgttcaggcagaaaaatgccagtatgctttctgtctgcagagtagtgggc
tatgccacaccaatatgaacagcgtgggccctgggacctgctctgagtcc
acttgcagccactgacacttgaggggattaaaaaaaaaagcccagcccca
aaaccatcgtggggttggcttccatggctcttgaccaatgtggccaaagc
tagacacctcgggacacttggattattcataaatgcgacctaccccaaac
tccctgagtagcatctgaagtcttgtgaaggtcatggatcctgaccaaag
catcaagggcaccaagaaggctgatggaagtccccggaagcggctgacca
aaggagaggccattcagacgagtgtttcttccagtgctccatacccaggc
agcggcactactgctccctcagagagtgccacccaggagctcctagccac
gcagcctttctcaggcccctctcaggagaaaacgggccagcagcagaagc
ctgcccggaggccttccatcgaggcctcggtccacatctctcagcttccg
cagcaccctctgacaccagcattcatgtccccggggcaagccagagcatc
tcctcgaggggtccacgtggcagctggttgaccccatgagacctggaccc
tcggctcctttgtggcccccgggctgcatccgcagagccagctcctccca
tcccatgcttctatccttcctcctgaggagctgcctggcatccctaaggt
ctttgtgcctcgtccctcacaggtctccctgaaacctgcagaagagcaca
cagaaagagaggaaaccgcagtagccaggccagtatatatgtcatactgc
agcgacctgcgcagccagtgtgctccagaaacacatcgctcacacacagt
gagaggcc
tctccaccccccgtccccaagtcagagtcccaactactgggcttacttgg
ctggttatactctctacaatgttcttctccacctaccacatcacctgtgc
tgcctgccagctctatagcgctgtggtttgtaagtgtccctgaaaggcct
ggccattaaccttggtgttactgggaagaggaactttaagactgaggcct
agttgggtgtggtgactcacttgaaattccagcacttgagaggctgaggc
aagaggattgccatgacttcaggaccagcctgggcttcatggtgagaccc
tgtccacacacctcctccctggaaagacagggagagagaagaaaagaggg
agtgggaaggaggagggagggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_119766611_119767728
seq2: B6Ng01-184G06.b_42_1149

seq1  GAATTCAAGGGCAGAAGAGGGCCGCCCCAGCATCCATTGTGGCATCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGCAGAAGAGGGCCGCCCCAGCATCCATTGTGGCATCTCTC  50

seq1  CGGCCCGGACTAGGGATGACAGGCCCATGGACATGGATGTCTCCGACCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCCGGACTAGGGATGACAGGCCCATGGACATGGATGTCTCCGACCTT  100

seq1  CAGCTGTTCATATAGCACACAGGGGACTCGTGGGGGCCGCTTGTCACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTTCATATAGCACACAGGGGACTCGTGGGGGCCGCTTGTCACCCA  150

seq1  AACCCACTCAATGGCAATACTGACATCTTCCAGGCTGTTTTCAAGACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACTCAATGGCAATACTGACATCTTCCAGGCTGTTTTCAAGACAGG  200

seq1  CGTTCAGGCAGAAAAATGCCAGTATGCTTTCTGTCTGCAGAGTAGTGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCAGGCAGAAAAATGCCAGTATGCTTTCTGTCTGCAGAGTAGTGGGC  250

seq1  TATGCCACACCAATATGAACAGCGTGGGCCCTGGGACCTGCTCTGAGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCACACCAATATGAACAGCGTGGGCCCTGGGACCTGCTCTGAGTCC  300

seq1  ACTTGCAGCCACTGACACTTGAGGGGATTAAAAAAAAAAGCCCAGCCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCAGCCACTGACACTTGAGGGGATTAAAAAAAAAAGCCCAGCCCCA  350

seq1  AAACCATCGTGGGGTTGGCTTCCATGGCTCTTGACCAATGTGGCCAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCATCGTGGGGTTGGCTTCCATGGCTCTTGACCAATGTGGCCAAAGC  400

seq1  TAGACACCTCGGGACACTTGGATTATTCATAAATGCGACCTACCCCAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACACCTCGGGACACTTGGATTATTCATAAATGCGACCTACCCCAAAC  450

seq1  TCCCTGAGTAGCATCTGAAGTCTTGTGAAGGTCATGGATCCTGACCAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGAGTAGCATCTGAAGTCTTGTGAAGGTCATGGATCCTGACCAAAG  500

seq1  CATCAAGGGCACCAAGAAGGCTGATGGAAGTCCCCGGAAGCGGCTGACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGGGCACCAAGAAGGCTGATGGAAGTCCCCGGAAGCGGCTGACCA  550

seq1  AAGGAGAGGCCATTCAGACGAGTGTTTCTTCCAGTGCTCCATACCCAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAGGCCATTCAGACGAGTGTTTCTTCCAGTGCTCCATACCCAGGC  600

seq1  AGCGGCACTACTGCTCCCTCAGAGAGTGCCACCCAGGAGCTCCTAGCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGCACTACTGCTCCCTCAGAGAGTGCCACCCAGGAGCTCCTAGCCAC  650

seq1  GCAGCCTTTCTCAGGCCCCTCTCAGGAGAAAACGGGCCAGCAGCAGAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTTTCTCAGGCCCCTCTCAGGAGAAAACGGGCCAGCAGCAGAAGC  700

seq1  CTGCCCGGAGGCCTTCCATCGAGGCCTCGGTCCACATCTCTCAGCTTCCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCGGAGGCCTTCCATCGAGGCCTCGGTCCACATCTCTCAGCTTCCG  750

seq1  CAGCACCCTCTGACACCAGCATTCATGTCCCC-GGGCAAGCCAGAGCATC  799
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  CAGCACCCTCTGACACCAGCATTCATGTCCCCGGGGCAAGCCAGAGCATC  800

seq1  TCCTCGAGGGGTCCACGTGGCAGCTGGTTGACCCCATGAGACCTGGACCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGAGGGGTCCACGTGGCAGCTGGTTGACCCCATGAGACCTGGACCC  850

seq1  TCGGGCTCCTTTGTGGCCCCCGGGCTGCATCCGCAGAGCCAGCTCCTCCC  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TC-GGCTCCTTTGTGGCCCCCGGGCTGCATCCGCAGAGCCAGCTCCTCCC  899

seq1  ATCCCATGCTTCTATCCTTCCTCCTGAGGAGCTGCCTGGCATCCCTAAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATGCTTCTATCCTTCCTCCTGAGGAGCTGCCTGGCATCCCTAAGG  949

seq1  TCTTTGTGCCTCGTCCCTCACAGGTCTCCCTGAAACCTGCAGAAGAGGCA  999
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TCTTTGTGCCTCGTCCCTCACAGGTCTCCCTGAAACCTGCAGAAGA-GCA  998

seq1  CACAAGAAAGAGAGGAAACCGCAGAAGCCAGGCAAGTATATATGTCAATA  1049
      ||| |||||||||||||||||||| |||||||| |||||||||||| |||
seq2  CAC-AGAAAGAGAGGAAACCGCAGTAGCCAGGCCAGTATATATGTC-ATA  1046

seq1  CTGCAGCCGACCCTGCGCCAAGCCCAGTGTGCTCCAGAAACACATTCGCT  1099
      |||||| ||| |||||||  || ||||||||||||||||||||| |||||
seq2  CTGCAG-CGA-CCTGCGC--AG-CCAGTGTGCTCCAGAAACACA-TCGCT  1090

seq1  CACACACAGGTGAGAGGCC  1118
      |||||||| ||||||||||
seq2  CACACACA-GTGAGAGGCC  1108

seq1: chr4_119887101_119887479
seq2: B6Ng01-184G06.g_64_442 (reverse)

seq1  GTCCCTCCCTCCTCCTTCCCACTCCCTCTTTTCTTCTCTCTCCCTGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCCCTCCTCCTTCCCACTCCCTCTTTTCTTCTCTCTCCCTGTCTT  50

seq1  TCCAGGGAGGAGGTGTGTGGACAGGGTCTCACCATGAAGCCCAGGCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGGAGGAGGTGTGTGGACAGGGTCTCACCATGAAGCCCAGGCTGGT  100

seq1  CCTGAAGTCATGGCAATCCTCTTGCCTCAGCCTCTCAAGTGCTGGAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGTCATGGCAATCCTCTTGCCTCAGCCTCTCAAGTGCTGGAATTT  150

seq1  CAAGTGAGTCACCACACCCAACTAGGCCTCAGTCTTAAAGTTCCTCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGTCACCACACCCAACTAGGCCTCAGTCTTAAAGTTCCTCTTCC  200

seq1  CAGTAACACCAAGGTTAATGGCCAGGCCTTTCAGGGACACTTACAAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACACCAAGGTTAATGGCCAGGCCTTTCAGGGACACTTACAAACCA  250

seq1  CAGCGCTATAGAGCTGGCAGGCAGCACAGGTGATGTGGTAGGTGGAGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGCTATAGAGCTGGCAGGCAGCACAGGTGATGTGGTAGGTGGAGAAG  300

seq1  AACATTGTAGAGAGTATAACCAGCCAAGTAAGCCCAGTAGTTGGGACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGTAGAGAGTATAACCAGCCAAGTAAGCCCAGTAGTTGGGACTCT  350

seq1  GACTTGGGGACGGGGGGTGGAGAGAATTC  379
      |||||||||||||||||||||||||||||
seq2  GACTTGGGGACGGGGGGTGGAGAGAATTC  379